Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STRA6

Gene Name Gene ID Reads Annotation
STRA6 ENSGALG00000001449 8248 stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]











Genes with expression patterns similar to STRA6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STRA6 ENSGALG00000001449 8248 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]
2. DNAJA4 ENSGALG00000036850 6847 1.54 - - - - - - 0.786 0.754 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
3. DCPS ENSGALG00000031143 10191 1.501 - - - - - - 0.800 0.701 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
4. ENSGALG00000026433 ENSGALG00000026433 14463 1.499 - 0.740 - - - - - 0.759 - -
5. SOX18 ENSGALG00000034118 5453 1.46 - - - - - - 0.745 0.715 - - SRY-box 18 [Source:NCBI gene;Acc:374200]
6. CDK2AP1 ENSGALG00000034919 5469 1.439 - - - - - - 0.736 0.703 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
7. LYSMD2 ENSGALG00000018976 2420 1.431 - - - - - - 0.711 0.720 - - LysM domain containing 2 [Source:NCBI gene;Acc:415423]
8. PRPS2 ENSGALG00000016592 165 0.845 - - - - - - - - 0.845 - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
9. IGBP1 ENSGALG00000044628 9200 0.827 - - - - - - 0.827 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
10. EYA4 ENSGALG00000031656 463 0.827 - - - - - - - - 0.827 - EYA transcriptional coactivator and phosphatase 4 [Source:NCBI gene;Acc:395716]
11. ILF2 ENSGALG00000011570 23050 0.823 - - - - - - 0.823 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
12. TGFB2 ENSGALG00000009612 10223 0.823 - - - - - - - 0.823 - - transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
13. MUC5B MUC5B 62 0.822 - - - - - - - - 0.822 -
14. BTK ENSGALG00000004958 272 0.822 - - - - - - - - 0.822 - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
15. CTCF 10811 0.82 - - - - - - 0.820 - - - CCCTC-binding factor, transcript variant X2
16. OSBPL11 ENSGALG00000012059 2523 0.819 - - - - - - - - 0.819 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
17. TPP1 52 0.816 - - - - - - - - 0.816 - tripeptidyl peptidase 1
18. NANS ENSGALG00000015320 10552 0.816 - - - - - - - 0.816 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
19. TRAF7 ENSGALG00000005767 4615 0.813 - - - - - - 0.813 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
20. EHD3 ENSGALG00000009086 14407 0.81 - - - - - - 0.810 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
21. PPIC ENSGALG00000005346 5002 0.808 - - - - - - 0.808 - - - peptidylprolyl isomerase C [Source:HGNC Symbol;Acc:HGNC:9256]
22. NDNF ENSGALG00000011962 2261 0.808 - - - - - - - 0.808 - - neuron-derived neurotrophic factor, transcript variant X4
23. NCBP2_1 ENSGALG00000006843 7170 0.806 - - - - - - - 0.806 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
24. DACT1 ENSGALG00000012023 1008 0.804 - - - - - - - - 0.804 - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
25. HELLS ENSGALG00000005451 7094 0.804 - - - - - - - 0.804 - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
26. NDUFAF6 ENSGALG00000040366 1647 0.804 - - - - - - 0.804 - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:HGNC Symbol;Acc:HGNC:28625]
27. ATP6AP1 ENSGALG00000008836 4343 0.803 - - - - - - 0.803 - - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
28. TMCC2 ENSGALG00000034281 3458 0.801 - - - - - - - 0.801 - - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
29. TIMM8A ENSGALG00000004963 14263 0.799 - - - - - - - 0.799 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
30. PRIM2 ENSGALG00000016278 5160 0.798 - - - - - - - 0.798 - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
31. CDC42BPA ENSGALG00000009158 3926 0.794 - - - - - - 0.794 - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
32. HSP70 HSP70 986 0.793 - - - - - - - - 0.793 -
33. EPFIP1L ENSGALG00000007683 18050 0.792 - - - - - - 0.792 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
34. MAP3K7 ENSGALG00000015596 15164 0.792 - - - - - - 0.792 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
35. ENSGALG00000009771 ENSGALG00000009771 10273 0.791 - - - - - - 0.791 - - -
36. PPP1R2 ENSGALG00000029789 11594 0.791 - - - - - - 0.791 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
37. SPINK5 SPINK5 195 0.791 - - - - - - - - 0.791 -
38. PSMB2 ENSGALG00000026421 51885 0.789 - - - - - - 0.789 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
39. LIMD1 ENSGALG00000035623 7282 0.788 - - - - - - 0.788 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
40. BORA ENSGALG00000016931 3660 0.788 - - - - - - - 0.788 - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
41. PCTP ENSGALG00000003099 5851 0.787 - - - - - - 0.787 - - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
42. KCNJ11 ENSGALG00000020505 196 0.787 - - - - - - - - 0.787 - potassium voltage-gated channel subfamily J member 11 [Source:HGNC Symbol;Acc:HGNC:6257]
43. ANLN 10479 0.787 - - - - - - - 0.787 - - anillin actin binding protein, transcript variant X2
44. SUV39H2 ENSGALG00000013920 4360 0.785 - - - - - - - 0.785 - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
45. PFKFB3 ENSGALG00000040369 2119 0.784 - - - - - - - 0.784 - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:HGNC Symbol;Acc:HGNC:8874]
46. INTS2 ENSGALG00000005269 6966 0.783 - - - - - - 0.783 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
47. UMPS ENSGALG00000011770 11331 0.783 - - - - - - 0.783 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
48. DGCR2 ENSGALG00000005891 8405 0.783 - - - - - - 0.783 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
49. GGA.1330 GGA.1330 11281 0.782 - - - - - - 0.782 - - -
50. UNKL ENSGALG00000030069, ENSGALG00000043765 792 0.782 - - - - - - - - 0.782 - unkempt family like zinc finger, transcript variant X5
51. PLCB1 ENSGALG00000008875 334 0.781 - - - - - - - - 0.781 - phospholipase C beta 1 [Source:HGNC Symbol;Acc:HGNC:15917]
52. NISCH ENSGALG00000043825 2193 0.781 - - - - - - - 0.781 - - nischarin [Source:HGNC Symbol;Acc:HGNC:18006]
53. SPINT1 ENSGALG00000008469 5735 0.78 - - - - - - - - 0.780 - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
54. FGF12 ENSGALG00000036971 2631 0.78 - - - - - - - - 0.780 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
55. CLN8 ENSGALG00000039606 4209 0.779 - - - - - - - - 0.779 - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
56. RBPMS_1 ENSGALG00000010291 16146 0.779 - - - - - - - 0.779 - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
57. RRP1B ENSGALG00000035696 12309 0.777 - - - - - - - 0.777 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
58. F F 3639 0.776 - - - - - - - 0.776 - -
59. BCL11A ENSGALG00000034048 4111 0.775 - - - - - - - 0.775 - - B cell CLL/lymphoma 11A [Source:NCBI gene;Acc:421199]
60. DNAJB11 ENSGALG00000006564 9353 0.774 - - - - - - - 0.774 - - DnaJ heat shock protein family (Hsp40) member B11
61. PLK1 ENSGALG00000006110 12892 0.774 - - - - - - - 0.774 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
62. NRBP1 ENSGALG00000016512 4725 0.774 - - - - - - 0.774 - - - nuclear receptor binding protein 1 [Source:NCBI gene;Acc:421985]
63. PHPT1 ENSGALG00000039061 17343 0.774 - - - - - - - 0.774 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
64. GCHFR ENSGALG00000032239 1608 0.773 - - - - - - - 0.773 - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
65. JUN ENSGALG00000010870 2764 0.772 - - - - - - - 0.772 - - Jun proto-oncogene, AP-1 transcription factor subunit [Source:NCBI gene;Acc:424673]
66. RPA3 ENSGALG00000010700 6212 0.771 - - - - - - - 0.771 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
67. ARHGAP19 ENSGALG00000007609 3655 0.771 - - - - - - - 0.771 - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
68. GPC1 ENSGALG00000040316 13364 0.77 - - - - - - - 0.770 - - glypican 1 [Source:NCBI gene;Acc:424770]
69. URI1 ENSGALG00000004506 6024 0.77 - - - - - - 0.770 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
70. GATA5 ENSGALG00000005352 11876 0.769 - - - - - - - - 0.769 - GATA binding protein 5 [Source:NCBI gene;Acc:396391]
71. KDELR2 ENSGALG00000040793 29669 0.768 - - - - - - 0.768 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
72. THOC3 ENSGALG00000024172 7617 0.767 - - - - - - - 0.767 - - THO complex 3 [Source:NCBI gene;Acc:416232]
73. NUDT4 ENSGALG00000011285 2998 0.767 - - - - - - 0.767 - - - nudix hydrolase 4, transcript variant X5
74. G6PC2 ENSGALG00000010899 260 0.766 - - - - - - - - 0.766 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
75. ATP2B1 ENSGALG00000030550 15123 0.766 - - - - - - 0.766 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
76. NDUFAB1 ENSGALG00000006073 40467 0.765 - - - - - - 0.765 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
77. ELMOD1 ENSGALG00000017169 2303 0.765 - - - - - - - 0.765 - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
78. SLMO2 SLMO2 9207 0.765 - - - - - - - 0.765 - -
79. IFRD1 ENSGALG00000009448 8865 0.765 - - - - - - - 0.765 - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
80. USP32 ENSGALG00000005350 1686 0.765 - - - - - - - - 0.765 - ubiquitin specific peptidase 32, transcript variant X2
81. SGCE ENSGALG00000009670 3070 0.765 - - - - - - - - 0.765 - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
82. KIAA1671 ENSGALG00000005512 2540 0.765 - - - - - - 0.765 - - - KIAA1671 [Source:NCBI gene;Acc:768701]
83. MAP2K4 ENSGALG00000032178 5982 0.763 - - - - - - 0.763 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
84. gga-mir-6587 ENSGALG00000026386 9441 0.762 - - - - - - 0.762 - - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
85. STRN3 ENSGALG00000040464 9045 0.762 - - - - - - - 0.762 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
86. ACTN1 ENSGALG00000042458 10477 0.761 - - - - - - 0.761 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
87. AN1ZNF5L ENSGALG00000014589 21148 0.76 - - - - - - 0.760 - - - AN1-type zinc finger protein 5-like, transcript variant X2
88. PCM1 ENSGALG00000013602 6347 0.76 - - - - - - 0.760 - - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
89. DPYSL2 ENSGALG00000000227 9668 0.759 - - - - - - 0.759 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
90. SNUPN ENSGALG00000029537 4451 0.758 - - - - - - - 0.758 - - snurportin 1 [Source:NCBI gene;Acc:770225]
91. METTL21A ENSGALG00000008493 3188 0.758 - - - - - - 0.758 - - - methyltransferase like 21A [Source:NCBI gene;Acc:424094]
92. TBL3 ENSGALG00000005558 8363 0.758 - - - - - - - 0.758 - - transducin beta like 3 [Source:NCBI gene;Acc:416545]
93. PSMC3 ENSGALG00000008108 22922 0.757 - - - - - - 0.757 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
94. WDR3 ENSGALG00000014791 5856 0.757 - - - - - - - 0.757 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
95. TPRKB ENSGALG00000013018 8687 0.757 - - - - - - 0.757 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
96. IGSF21 ENSGALG00000037479 1105 0.757 - - - - - - - 0.757 - - immunoglobin superfamily member 21 [Source:HGNC Symbol;Acc:HGNC:28246]
97. RDH10 ENSGALG00000034346 15285 0.757 - - - - - - 0.757 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
98. C17H9ORF16 C17H9ORF16 7908 0.756 - - - - - - 0.756 - - -
99. PPDPF ENSGALG00000005849 16711 0.756 - - - - - - 0.756 - - - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
100. TMEM70 ENSGALG00000033568 10720 0.756 - - - - - - 0.756 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]

There are 276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA