Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STMN1

Gene Name Gene ID Reads Annotation
STMN1 ENSGALG00000001475 225354 stathmin 1 [Source:NCBI gene;Acc:396057]











Genes with expression patterns similar to STMN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STMN1 ENSGALG00000001475 225354 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stathmin 1 [Source:NCBI gene;Acc:396057]
2. RTN1 ENSGALG00000012006 2438 1.68 - - - - - - - - 0.816 0.864 reticulon 1 [Source:NCBI gene;Acc:378791]
3. SYT4 ENSGALG00000042626 384 1.628 - - - - - - - - 0.803 0.825 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
4. ISL1 ENSGALG00000014884 7666 1.6 - - - - - - - - 0.781 0.819 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
5. GPM6A ENSGALG00000043480 2133 1.578 - - - - - - - - 0.783 0.795 glycoprotein M6A [Source:NCBI gene;Acc:422569]
6. NEFL ENSGALG00000000314 4883 1.569 - - - - - - - - 0.789 0.780 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
7. STMN2 ENSGALG00000039690 989 1.557 - - - - - - - - 0.793 0.764 stathmin 2 [Source:NCBI gene;Acc:396095]
8. TAGLN3 ENSGALG00000015379 7865 1.543 - - - - - - - - 0.727 0.816 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
9. SNAP25 ENSGALG00000009003 222 1.537 - - - - - - - - 0.720 0.817 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
10. NSG1 ENSGALG00000015010 5829 1.532 - - - - - - - - 0.770 0.762 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
11. MAP2 ENSGALG00000002789 6597 1.511 - - - - - - - - 0.752 0.759 microtubule associated protein 2, transcript variant X33
12. UCH-L1 UCH-L1 12697 1.503 - - - - - - - - 0.737 0.766
13. TUBB2B ENSGALG00000012821 41535 1.496 - - - - - - - - 0.760 0.736 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
14. MARCKSL1 ENSGALG00000032335 88728 1.493 - - - - 0.733 - - - - 0.760 MARCKS like 1 [Source:NCBI gene;Acc:770764]
15. MYT1 ENSGALG00000005932 2017 1.49 - - - - - - - - 0.739 0.751 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
16. ELAVL4 ENSGALG00000010533 4978 1.489 - - - - - - - - 0.743 0.746 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
17. GRM3 ENSGALG00000006576 474 1.454 - - - - - - - - 0.730 0.724 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
18. TBC1D30 ENSGALG00000009859 994 1.446 - - - - - - - - 0.705 0.741 TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
19. FABP5 ENSGALG00000041344 3984 0.832 - - - - - - - - - 0.832 fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
20. NEFM ENSGALG00000000317 6992 0.826 - - - - - - - - - 0.826 neurofilament medium [Source:NCBI gene;Acc:396206]
21. NFASC ENSGALG00000031776 4264 0.806 - - - - - - - - 0.806 - neurofascin [Source:NCBI gene;Acc:419824]
22. INA ENSGALG00000028238 208 0.806 - - - - - - - - 0.806 - internexin neuronal intermediate filament protein alpha
23. MYT1L ENSGALG00000016384 147 0.803 - - - - - - - - - 0.803 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
24. RUSC2 ENSGALG00000002371 272 0.8 - - - - - - - - 0.800 - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
25. RPS29 ENSGALG00000012229 400769 0.8 - - - - 0.800 - - - - - ribosomal protein S29 [Source:NCBI gene;Acc:776054]
26. CDH12 ENSGALG00000012941 223 0.791 - - - - - - - - - 0.791 cadherin 12, transcript variant X8
27. PLPPR1 ENSGALG00000015542 3179 0.775 - - - - - - - - - 0.775 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
28. COX4I1 68632 0.774 - - - - 0.774 - - - - - cytochrome c oxidase subunit 4I1, transcript variant X1
29. RPL36AL ENSGALG00000004952 205590 0.773 - - - - 0.773 - - - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
30. RPL32 ENSGALG00000027142 294148 0.768 - - - - - - 0.768 - - - ribosomal protein L32 [Source:NCBI gene;Acc:416122]
31. H3-IX_1 H3-IX_1 54392 0.766 - - - - 0.766 - - - - -
32. SUMO3 ENSGALG00000032783 47823 0.764 - - - - 0.764 - - - - - small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]
33. CRMP1B CRMP1B 18633 0.763 - - - - - - - - - 0.763
34. FABP7 ENSGALG00000038933 6780 0.759 - - - - - - - - - 0.759 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
35. SLC5A7 ENSGALG00000016804 93 0.757 - - - - - - - - 0.757 - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
36. GAPDH ENSGALG00000014442 755199 0.756 - - - - - 0.756 - - - - glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
37. PSMA7 ENSGALG00000030411 42436 0.756 - - - - 0.756 - - - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
38. HMGCS1 ENSGALG00000014862 2846 0.756 - - - - - - - - 0.756 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
39. EF1A EF1A 2378 0.754 - - - - - - - - 0.754 -
40. GAP43 ENSGALG00000015089 505 0.752 - - - - - - - - 0.752 - growth associated protein 43 [Source:NCBI gene;Acc:427955]
41. ELOVL4 ENSGALG00000015876 853 0.751 - - - - - - - - 0.751 - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
42. EEF2 ENSGALG00000033884 62036 0.75 - - - - 0.750 - - - - - eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
43. MNR2 ENSGALG00000011349 3340 0.75 - - - - - - - - 0.750 - homeodomain protein
44. DPYSL4 ENSGALG00000010490 3431 0.748 - - - - - - - - 0.748 - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
45. MAP1B ENSGALG00000014999 6288 0.746 - - - - - - - - - 0.746 microtubule associated protein 1B
46. SCML4 ENSGALG00000015309 499 0.746 - - - - - - - - 0.746 - Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
47. AZIN1 ENSGALG00000029295 11085 0.745 - - - - 0.745 - - - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
48. SLC25A6_1 ENSGALG00000016691 159994 0.741 - - - - 0.741 - - - - - solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
49. GDI2 ENSGALG00000008169 67151 0.741 - - - - - - - - - 0.741 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
50. BAI1 BAI1 235 0.74 - - - - - - - - - 0.740
51. GPR20 ENSGALG00000041730 1926 0.739 - - - - - 0.739 - - - - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
52. RPS20 ENSGALG00000014432 209638 0.739 - - - - - 0.739 - - - - ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
53. HNRNPA2B1 ENSGALG00000011036 53662 0.738 - - - - 0.738 - - - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
54. EPFIP1L ENSGALG00000007683 18050 0.737 - - - - 0.737 - - - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
55. ATP5C1 53961 0.736 - - - - 0.736 - - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
56. ZBTB18 ENSGALG00000010705 3433 0.736 - - - - - - - - - 0.736 zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
57. ASTN1 ENSGALG00000004472 855 0.735 - - - - - - - - - 0.735 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
58. SIAT8C SIAT8C 178 0.735 - - - - - - - - 0.735 -
59. ANXA1 ENSGALG00000015148 13804 0.734 - - - - - 0.734 - - - - annexin A1 [Source:NCBI gene;Acc:404271]
60. LIMD2 ENSGALG00000000529 30617 0.734 - - - - 0.734 - - - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
61. FAM110A ENSGALG00000046425 5558 0.734 - - - - - - - - - 0.734 family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
62. ECEL1 ENSGALG00000030420 670 0.734 - - - - - - - - 0.734 - endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
63. RGMA ENSGALG00000039173 12874 0.732 - - - - - - - - - 0.732 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
64. GNB2L1 ENSGALG00000000122 194871 0.731 - - - - 0.731 - - - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
65. EIF3L ENSGALG00000012296 42627 0.73 - - - - 0.730 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
66. XRN2 ENSGALG00000008372 22164 0.73 - - - - 0.730 - - - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
67. SEPT3 ENSGALG00000011913 144 0.73 - - - - - - - - 0.730 - septin 3 [Source:HGNC Symbol;Acc:HGNC:10750]
68. ATP6V0E2 ENSGALG00000020754 2648 0.73 - - - - - - - - - 0.730 ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
69. RPL37 ENSGALG00000014833 177366 0.728 - - - - 0.728 - - - - - ribosomal protein L37 [Source:NCBI gene;Acc:427186]
70. PAX-7 PAX-7 3856 0.728 - - - - 0.728 - - - - -
71. VHL ENSGALG00000028009 25009 0.726 - - - - 0.726 - - - - - von Hippel-Lindau tumor suppressor, transcript variant X1
72. HES5 ENSGALG00000001141 6514 0.725 - - - - - - - - - 0.725 hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
73. RPL7A ENSGALG00000003197 353903 0.725 - - - - - 0.725 - - - - ribosomal protein L7a [Source:NCBI gene;Acc:417158]
74. SLMO1 SLMO1 4357 0.724 - - - - - - - - - 0.724
75. MURC 3759 0.722 - - - - - - - - - 0.722 muscle related coiled-coil protein
76. SEC63 ENSGALG00000015308 11596 0.721 - - - - 0.721 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
77. GNG2 ENSGALG00000027629 9404 0.72 - - - - - - - - 0.720 - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
78. RBM26 ENSGALG00000016910 13769 0.72 - - - - 0.720 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
79. KCNK2 ENSGALG00000009687 1552 0.718 - - - - - - - - - 0.718 potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
80. GADD45_1 GADD45_1 1433 0.718 - - - - - - - - - 0.718
81. ZEB1 ENSGALG00000007260 9277 0.718 - - - - 0.718 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
82. ZMAT2 ENSGALG00000041746 23601 0.718 - - - - 0.718 - - - - - zinc finger matrin-type 2 [Source:NCBI gene;Acc:427602]
83. HOXA7 ENSGALG00000026989 6746 0.717 - - - - - - - - 0.717 - homeobox A7 [Source:NCBI gene;Acc:395290]
84. PSMD14 ENSGALG00000011128 13335 0.716 - - - - 0.716 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
85. SMNDC1 ENSGALG00000008561 14415 0.715 - - - - 0.715 - - - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
86. NHLH1 ENSGALG00000025817 1617 0.714 - - - - - - - - - 0.714 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
87. GABRA3 ENSGALG00000007269 985 0.714 - - - - - - - - 0.714 - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
88. MAP6 ENSGALG00000007441 585 0.713 - - - - - - - - - 0.713 microtubule associated protein 6 [Source:NCBI gene;Acc:395753]
89. MSMO1 ENSGALG00000009560 6928 0.712 - - - - - - - - - 0.712 methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
90. RPS6 ENSGALG00000015082 307412 0.712 - - - - 0.712 - - - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
91. WSCD2 ENSGALG00000004849 477 0.711 - - - - - - - - - 0.711 WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
92. STMN3 ENSGALG00000006130 151 0.709 - - - - - - - - 0.709 - stathmin 3 [Source:NCBI gene;Acc:419263]
93. ABCF2 ENSGALG00000034573 15639 0.709 - - - - 0.709 - - - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
94. BASP1 ENSGALG00000012952 19549 0.709 - - - - - - - - 0.709 - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
95. BRP44L BRP44L 30452 0.709 - - - - 0.709 - - - - -
96. HOXA4 ENSGALG00000022622 22327 0.709 - - - - 0.709 - - - - - homeobox A4 [Source:NCBI gene;Acc:395307]
97. AHCY ENSGALG00000033677 35555 0.708 - - - - 0.708 - - - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
98. CKB ENSGALG00000011511 2100 0.708 - - - - - - - - - 0.708 creatine kinase B [Source:NCBI gene;Acc:396248]
99. DENND5B 4077 0.708 - - - - - - - - - 0.708 DENN domain containing 5B, transcript variant X1
100. CCDC180 109 0.707 - - - - - - - - - 0.707 coiled-coil domain containing 180

There are 11 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA