Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STAU1

Gene Name Gene ID Reads Annotation
STAU1 ENSGALG00000004736 3828 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]











Genes with expression patterns similar to STAU1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STAU1 ENSGALG00000004736 3828 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
2. ACOX1 ENSGALG00000002159 2953 1.707 - - 0.819 - - - - - - 0.888 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
3. SNN ENSGALG00000028876 1687 1.684 - - 0.843 - - - - - - 0.841 stannin [Source:NCBI gene;Acc:416429]
4. YBX3 ENSGALG00000031890 819 1.666 - - 0.891 - - - - - - 0.775 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
5. DNAJC24 ENSGALG00000012130 1882 1.656 - - 0.816 - - - - - - 0.840 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
6. KDM6A ENSGALG00000016217 2302 1.621 - - 0.825 - - - - - - 0.796 lysine demethylase 6A, transcript variant X14
7. CEPT1 ENSGALG00000000142 4219 1.62 - - 0.762 - - - - - - 0.858 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
8. TFAP2C ENSGALG00000007690 768 1.614 - - 0.848 - - - 0.766 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
9. RALGAPA2 240 1.6 - - 0.870 - - - 0.730 - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
10. MRPS5 ENSGALG00000008550 1707 1.581 - - 0.730 - - - - - - 0.851 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
11. IWS1 ENSGALG00000001803 2305 1.571 - - 0.727 - - - - - - 0.844 IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
12. DENND1A ENSGALG00000001157 503 1.567 - - - - - - 0.749 - - 0.818 DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
13. C1H12ORF4 2696 1.549 - - 0.775 - - - 0.774 - - - chromosome 1 open reading frame, human C12orf4
14. CNTN1 ENSGALG00000009523 158 1.537 - - - - - - 0.805 - - 0.732 contactin 1 [Source:NCBI gene;Acc:417786]
15. VPS13D ENSGALG00000034777 2350 1.534 - - 0.813 - - - 0.721 - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
16. CSTF3 ENSGALG00000011685 4711 1.533 - - 0.818 - - - - - - 0.715 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
17. DNTTIP1 ENSGALG00000003575 4687 1.528 - - 0.798 - - - 0.730 - - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
18. LYPLA2 ENSGALG00000004002 3939 1.522 - - 0.818 - - - - - - 0.704 lysophospholipase II [Source:NCBI gene;Acc:419685]
19. LUZP1 ENSGALG00000025858 947 1.509 - - - - - - 0.701 - - 0.808 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
20. DAZAP1 ENSGALG00000015200 1731 1.481 - - - - - - - 0.702 - 0.779 DAZ associated protein 1 [Source:NCBI gene;Acc:427266]
21. MCM3 ENSGALG00000016676 16934 1.473 - - 0.739 - - - - - - 0.734 minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
22. DHFR ENSGALG00000026757 18478 1.433 - - 0.731 - - - - - - 0.702 dihydrofolate reductase [Source:NCBI gene;Acc:427317]
23. U2SURP ENSGALG00000002612 4255 0.913 - - - - - - - - - 0.913 U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
24. NBN ENSGALG00000037686 648 0.902 - - - - - - - - - 0.902 nibrin [Source:NCBI gene;Acc:374246]
25. ITM2B ENSGALG00000016996 1112 0.901 - - 0.901 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
26. SLC37A3 ENSGALG00000012849 836 0.9 - - 0.900 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
27. NGF ENSGALG00000002556 122 0.9 - - 0.900 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
28. POGZ ENSGALG00000036365 4056 0.898 - - 0.898 - - - - - - - pogo transposable element with ZNF domain, transcript variant X2
29. PCDH17 ENSGALG00000016941 1006 0.895 - - 0.895 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
30. PRUNE PRUNE 452 0.894 - - 0.894 - - - - - - -
31. CHAMP1 ENSGALG00000016813 508 0.893 - - 0.893 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
32. BBX ENSGALG00000015353 1281 0.892 - - 0.892 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
33. KCTD3 ENSGALG00000009678 335 0.892 - - 0.892 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
34. ZFX ENSGALG00000016327 5470 0.892 - - - - - - - - - 0.892 zinc finger protein, X-linked, transcript variant X4
35. TUBGCP3 ENSGALG00000016836 332 0.892 - - 0.892 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
36. TTPAL ENSGALG00000004244 2734 0.892 - - 0.892 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
37. HYAL1 ENSGALG00000000785 1778 0.891 - - 0.891 - - - - - - - hyaluronoglucosaminidase 1, transcript variant X3
38. MED12 ENSGALG00000036322 814 0.891 - - 0.891 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
39. XRCC6 ENSGALG00000011932 2302 0.891 - - 0.891 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:NCBI gene;Acc:395767]
40. DBN1 ENSGALG00000033405 216 0.891 - - 0.891 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
41. ENSGALG00000002020 ENSGALG00000002020 183 0.89 - - 0.890 - - - - - - -
42. TRIM3 ENSGALG00000034004 110 0.89 - - - - - - - - - 0.890 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
43. CTCF 10811 0.89 - - - - - - - - - 0.890 CCCTC-binding factor, transcript variant X2
44. CCBL2 CCBL2 184 0.889 - - - - - - - - - 0.889
45. L3MBTL3 ENSGALG00000034030 113 0.889 - - 0.889 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
46. UEVLD ENSGALG00000006342 164 0.888 - - 0.888 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
47. SZT2 ENSGALG00000028561 255 0.888 - - 0.888 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
48. TMEM242 ENSGALG00000013689 377 0.888 - - 0.888 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
49. PRICKLE1 ENSGALG00000009556 60 0.887 - - - - - - - - - 0.887 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
50. TCTN2 ENSGALG00000023683 3596 0.887 - - 0.887 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
51. AKAP10 ENSGALG00000004679 103 0.887 - - 0.887 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
52. RECQL ENSGALG00000013174 1323 0.887 - - 0.887 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
53. TRIM13 ENSGALG00000017011 92 0.886 - - 0.886 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
54. RASSF8 ENSGALG00000014041 850 0.886 - - - - - - - - - 0.886 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
55. LCMT1 ENSGALG00000005973 1300 0.886 - - 0.886 - - - - - - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
56. CLEC16A ENSGALG00000007167 66 0.886 - - 0.886 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
57. AGFG1 ENSGALG00000003052 4766 0.886 - - 0.886 - - - - - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
58. CDC14B ENSGALG00000012627 110 0.886 - - 0.886 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
59. TDRD6 48 0.885 - - 0.885 - - - - - - - tudor domain containing 6
60. RAD1 ENSGALG00000003365 1417 0.885 - - 0.885 - - - - - - - RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
61. PCYOX1 ENSGALG00000013878 2200 0.885 - - 0.885 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
62. ITGB4 ENSGALG00000002389 44 0.885 - - 0.885 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
63. MRC2 ENSGALG00000000461 48 0.885 - - 0.885 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
64. ABCE1 ENSGALG00000009961 958 0.885 - - 0.885 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
65. ENSGALG00000028964 ENSGALG00000028964 46 0.885 - - 0.885 - - - - - - -
66. SMARCAD1 ENSGALG00000037339 149 0.884 - - 0.884 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
67. RQCD1 RQCD1 110 0.884 - - 0.884 - - - - - - -
68. SNX14 ENSGALG00000015831 2554 0.884 - - 0.884 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
69. FAM134C 860 0.884 - - 0.884 - - - - - - - family with sequence similarity 134 member C
70. PDCD7 ENSGALG00000021027 3807 0.884 - - - - - - - - - 0.884 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
71. HOXA7 ENSGALG00000026989 6746 0.884 - - 0.884 - - - - - - - homeobox A7 [Source:NCBI gene;Acc:395290]
72. RPS6KB1 ENSGALG00000005198 169 0.884 - - 0.884 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
73. MLLT3 ENSGALG00000015078 502 0.883 - - 0.883 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
74. SELM SELM 6366 0.883 - - 0.883 - - - - - - -
75. ENSGALG00000004703 ENSGALG00000004703 112 0.883 - - 0.883 - - - - - - -
76. FBXO45 ENSGALG00000037281 3936 0.883 - - 0.883 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
77. RAD54L2 ENSGALG00000003243 187 0.883 - - 0.883 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
78. F2R ENSGALG00000014983 106 0.883 - - 0.883 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
79. FBXL5 ENSGALG00000014510 245 0.883 - - 0.883 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
80. ADK ENSGALG00000005057 199 0.883 - - 0.883 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
81. NXPE3 ENSGALG00000015344 111 0.883 - - 0.883 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
82. LRRC42 ENSGALG00000010743 384 0.882 - - 0.882 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
83. SUPV3L1 ENSGALG00000004197 4141 0.882 - - - - - - - - - 0.882 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
84. PTDSS2 ENSGALG00000004300 682 0.882 - - 0.882 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
85. PDIA5 ENSGALG00000011689 6913 0.881 - - 0.881 - - - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
86. SLC3A1 ENSGALG00000009973 608 0.881 - - 0.881 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
87. NDUFB1 ENSGALG00000028537 2059 0.881 - - 0.881 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
88. ENSGALG00000020103 ENSGALG00000020103 64 0.881 - - 0.881 - - - - - - -
89. OSGIN2 ENSGALG00000042840 83 0.881 - - 0.881 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
90. BAG5 ENSGALG00000031062 4498 0.88 - - 0.880 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
91. BBS5 ENSGALG00000009846 344 0.88 - - 0.880 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
92. U4 U4 69 0.88 - - 0.880 - - - - - - -
93. MRPS33 ENSGALG00000028879 17966 0.88 - - 0.880 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
94. GTF2H2 ENSGALG00000002399 2361 0.879 - - 0.879 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
95. ABCC3 ENSGALG00000007522 340 0.879 - - 0.879 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
96. RFK ENSGALG00000033558 1364 0.879 - - 0.879 - - - - - - - riboflavin kinase, transcript variant X3
97. ZNF385D ENSGALG00000011283 2578 0.878 - - 0.878 - - - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
98. TMEM199 ENSGALG00000023757 10781 0.878 - - - - - - - - - 0.878 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
99. DAK DAK 13208 0.878 - - 0.878 - - - - - - -
100. STXBP6 ENSGALG00000009847 224 0.878 - - 0.878 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]

There are 753 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA