Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STAMBP

Gene Name Gene ID Reads Annotation
STAMBP ENSGALG00000042555 1362 STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]











Genes with expression patterns similar to STAMBP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STAMBP ENSGALG00000042555 1362 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
2. NAA30 ENSGALG00000012098 4681 1.809 - - 0.829 - - - - 0.980 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
3. PDCD6 ENSGALG00000013400 7611 1.729 - - 0.737 - - - - 0.992 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
4. TMEM69 ENSGALG00000010279 716 1.728 - - - 0.728 - - - 1.000 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
5. PDCL3 ENSGALG00000016772 14897 1.703 - - 0.766 - - - - 0.937 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
6. FBXO9 ENSGALG00000016320 9600 1.645 - - 0.770 - - - - 0.875 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
7. TRUB1 ENSGALG00000009091 1005 1.611 - - 0.869 0.742 - - - - - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
8. TRA2B ENSGALG00000006531 40566 1.542 - - 0.737 - - - - 0.805 - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
9. ORC3 ENSGALG00000015800 4316 1.448 - - 0.745 0.703 - - - - - - origin recognition complex subunit 3 [Source:NCBI gene;Acc:421822]
10. C9orf89 C9orf89 3056 1 - - - - - - - 1.000 - -
11. GNA12 ENSGALG00000004368 692 1 - - - - - - - 1.000 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
12. VEGFC ENSGALG00000010847 2197 1 - - - - - - - 1.000 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
13. CREB1 ENSGALG00000008494 2219 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
14. USP30 ENSGALG00000040265 2000 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
15. SIN3A ENSGALG00000001644 1141 1 - - - - - - - 1.000 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
16. USP42 ENSGALG00000003378 1392 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
17. PRRX2 ENSGALG00000028236 1990 1 - - - - - - - 1.000 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
18. ENSGALG00000028413 ENSGALG00000028413 551 1 - - - - - - - 1.000 - -
19. TDRD1 ENSGALG00000046180 612 1 - - - - - - - 1.000 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
20. CTU2 4818 0.999 - - - - - - - 0.999 - - cytosolic thiouridylase subunit 2, transcript variant X3
21. TNFRSF21 ENSGALG00000016719 2762 0.999 - - - - - - - 0.999 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
22. SLBP ENSGALG00000015712 5586 0.999 - - - - - - - 0.999 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
23. RRBP1 ENSGALG00000008676 5376 0.999 - - - - - - - 0.999 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
24. VPS36 ENSGALG00000017026 3658 0.998 - - - - - - - 0.998 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
25. SLC52A3 ENSGALG00000006194 3952 0.998 - - - - - - - 0.998 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
26. ZNF462 ENSGALG00000015451 12653 0.998 - - - - - - - 0.998 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
27. ADAR ENSGALG00000021475 6004 0.997 - - - - - - - 0.997 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
28. CWC22 ENSGALG00000009001 5984 0.997 - - - - - - - 0.997 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
29. PHAX ENSGALG00000014691 8114 0.997 - - - - - - - 0.997 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
30. GYG1 ENSGALG00000035535 6311 0.997 - - - - - - - 0.997 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
31. PPAT ENSGALG00000013728 7563 0.997 - - - - - - - 0.997 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
32. INTS2 ENSGALG00000005269 6966 0.996 - - - - - - - 0.996 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
33. FAT1 ENSGALG00000013579 6030 0.996 - - - - - - - 0.996 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
34. PTK7 ENSGALG00000008609 8081 0.994 - - - - - - - 0.994 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
35. LMO7 ENSGALG00000016920 3809 0.994 - - - - - - - 0.994 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
36. KLHDC2 ENSGALG00000012244 12903 0.994 - - - - - - - 0.994 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
37. MAP4K3 ENSGALG00000039720 5124 0.982 - - - - - - - 0.982 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
38. WDFY3 10775 0.98 - - - - - - - 0.980 - - WD repeat and FYVE domain containing 3, transcript variant X7
39. LAMTOR2 ENSGALG00000029881 35356 0.977 - - - - - - - 0.977 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
40. RALGAPA2 240 0.968 - - 0.968 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
41. TMEM242 ENSGALG00000013689 377 0.965 - - 0.965 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
42. RECQL ENSGALG00000013174 1323 0.964 - - 0.964 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
43. NSUN4 ENSGALG00000010360 3567 0.963 - - - - - - - 0.963 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
44. SPATA20 ENSGALG00000006857 3506 0.961 - - - - - - - 0.961 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
45. C11orf57 C11orf57 4971 0.961 - - - - - - - 0.961 - -
46. CPSF4 ENSGALG00000004714 14353 0.961 - - - - - - - 0.961 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
47. MAPRE3 ENSGALG00000031726 191 0.96 - - 0.960 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
48. ACTR6 ENSGALG00000040976 31271 0.96 - - - - - - - 0.960 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
49. ABCE1 ENSGALG00000009961 958 0.96 - - 0.960 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
50. ATP8B4 ENSGALG00000002326 456 0.959 - - 0.959 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
51. WAPAL WAPAL 625 0.958 - - 0.958 - - - - - - -
52. ATF7IP ENSGALG00000011814 1571 0.958 - - 0.958 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
53. BMP4 ENSGALG00000012429 4306 0.957 - - - - - - - 0.957 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
54. RFK ENSGALG00000033558 1364 0.956 - - 0.956 - - - - - - - riboflavin kinase, transcript variant X3
55. RAD54L2 ENSGALG00000003243 187 0.955 - - 0.955 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
56. SLC3A1 ENSGALG00000009973 608 0.954 - - 0.954 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
57. RQCD1 RQCD1 110 0.954 - - 0.954 - - - - - - -
58. IFT81 ENSGALG00000003854 2534 0.953 - - 0.953 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
59. MLLT3 ENSGALG00000015078 502 0.953 - - 0.953 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
60. RPS6KB1 ENSGALG00000005198 169 0.953 - - 0.953 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
61. TIMM23B ENSGALG00000002089 8122 0.953 - - - - - - - 0.953 - - translocase of inner mitochondrial membrane 23 homolog B
62. ITGB4 ENSGALG00000002389 44 0.952 - - 0.952 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
63. TDRD6 48 0.952 - - 0.952 - - - - - - - tudor domain containing 6
64. F2R ENSGALG00000014983 106 0.952 - - 0.952 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
65. L3MBTL3 ENSGALG00000034030 113 0.952 - - 0.952 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
66. CDC14B ENSGALG00000012627 110 0.952 - - 0.952 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
67. MRC2 ENSGALG00000000461 48 0.952 - - 0.952 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
68. C18orf8 C18orf8 1512 0.951 - - 0.951 - - - - - - -
69. MED12 ENSGALG00000036322 814 0.951 - - 0.951 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
70. ENSGALG00000004703 ENSGALG00000004703 112 0.951 - - 0.951 - - - - - - -
71. MCM6 ENSGALG00000012348 12523 0.951 - - - - - - - 0.951 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
72. PTDSS2 ENSGALG00000004300 682 0.951 - - 0.951 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
73. ENSGALG00000028964 ENSGALG00000028964 46 0.951 - - 0.951 - - - - - - -
74. AKAP10 ENSGALG00000004679 103 0.951 - - 0.951 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
75. TCTN2 ENSGALG00000023683 3596 0.95 - - 0.950 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
76. ENSGALG00000002020 ENSGALG00000002020 183 0.95 - - 0.950 - - - - - - -
77. UEVLD ENSGALG00000006342 164 0.95 - - 0.950 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
78. KCTD3 ENSGALG00000009678 335 0.95 - - 0.950 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
79. U4 U4 69 0.95 - - 0.950 - - - - - - -
80. OSGIN2 ENSGALG00000042840 83 0.95 - - 0.950 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
81. CLEC16A ENSGALG00000007167 66 0.95 - - 0.950 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
82. SZT2 ENSGALG00000028561 255 0.949 - - 0.949 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
83. ENSGALG00000020103 ENSGALG00000020103 64 0.949 - - 0.949 - - - - - - -
84. NXPE3 ENSGALG00000015344 111 0.949 - - 0.949 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
85. DBN1 ENSGALG00000033405 216 0.949 - - 0.949 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
86. GTF2H2 ENSGALG00000002399 2361 0.948 - - 0.948 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
87. ABCC3 ENSGALG00000007522 340 0.948 - - 0.948 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
88. STXBP6 ENSGALG00000009847 224 0.948 - - 0.948 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
89. TRIM13 ENSGALG00000017011 92 0.948 - - 0.948 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
90. FBXL5 ENSGALG00000014510 245 0.948 - - 0.948 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
91. CSNK2A1 ENSGALG00000006197 41409 0.947 - - - - - - - 0.947 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
92. ADK ENSGALG00000005057 199 0.947 - - 0.947 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
93. CHAMP1 ENSGALG00000016813 508 0.947 - - 0.947 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
94. ITM2B ENSGALG00000016996 1112 0.946 - - 0.946 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
95. PPME1 ENSGALG00000017312 2634 0.946 - - 0.946 - - - - - - - protein phosphatase methylesterase 1 [Source:NCBI gene;Acc:419058]
96. MRPS33 ENSGALG00000028879 17966 0.946 - - 0.946 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
97. ENSGALG00000008689 ENSGALG00000008689 232 0.946 - - 0.946 - - - - - - -
98. BAG5 ENSGALG00000031062 4498 0.945 - - 0.945 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
99. SMARCAD1 ENSGALG00000037339 149 0.945 - - 0.945 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
100. LRRC42 ENSGALG00000010743 384 0.944 - - 0.944 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]

There are 530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA