Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SSU72

Gene Name Gene ID Reads Annotation
SSU72 ENSGALG00000001489 7589 SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]











Genes with expression patterns similar to SSU72

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SSU72 ENSGALG00000001489 7589 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
2. CYFIP1 ENSGALG00000016736 6701 1.773 - - - - - - 0.781 0.992 - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
3. EIF4E2 ENSGALG00000007919 8163 1.76 - - - - - - 0.769 0.991 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
4. DGCR2 ENSGALG00000005891 8405 1.735 - - - - - - 0.742 0.993 - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
5. TIMM10 ENSGALG00000004845 31395 1.72 - - - - - - 0.737 0.983 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
6. ARF6 ENSGALG00000026944 22014 1.715 - - - - - - 0.737 0.978 - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
7. MAP3K7 ENSGALG00000015596 15164 1.695 - - - - - - 0.776 0.919 - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
8. VMA21 ENSGALG00000009065 6432 1.694 - - - - - - 0.720 0.974 - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
9. VPS29 ENSGALG00000004529 22509 1.641 - - - - - - 0.795 0.846 - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
10. CHCHD3 ENSGALG00000006489 18592 1.559 - - - - - - 0.828 0.731 - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
11. PSMD3 ENSGALG00000033162 25615 1.549 - - - - - - 0.834 0.715 - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
12. RAB11B ENSGALG00000000613 20696 1.505 - - - - - - 0.796 0.709 - - RAB11B, member RAS oncogene family [Source:NCBI gene;Acc:420063]
13. ALG6 ENSGALG00000010991 3258 0.998 - - - - - - - 0.998 - - ALG6, alpha-1,3-glucosyltransferase [Source:NCBI gene;Acc:395078]
14. ING4 ENSGALG00000014457 5561 0.998 - - - - - - - 0.998 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
15. CDC42SE2 ENSGALG00000027258 4725 0.998 - - - - - - - 0.998 - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
16. IMPA1 ENSGALG00000034487 3691 0.998 - - - - - - - 0.998 - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
17. SGTA ENSGALG00000014067 2248 0.997 - - - - - - - 0.997 - - small glutamine rich tetratricopeptide repeat containing alpha [Source:NCBI gene;Acc:426396]
18. LANCL2 ENSGALG00000032570 815 0.997 - - - - - - - 0.997 - - LanC like 2 [Source:HGNC Symbol;Acc:HGNC:6509]
19. NME3 ENSGALG00000027635 5974 0.997 - - - - - - - 0.997 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:NCBI gene;Acc:416399]
20. EVC ENSGALG00000015037 1963 0.997 - - - - - - - 0.997 - - EvC ciliary complex subunit 1 [Source:NCBI gene;Acc:422851]
21. SIK1 ENSGALG00000041988 2179 0.997 - - - - - - - 0.997 - - salt inducible kinase 1 [Source:NCBI gene;Acc:395417]
22. SLC4A1AP ENSGALG00000010047 3171 0.997 - - - - - - - 0.997 - - solute carrier family 4 member 1 adaptor protein [Source:HGNC Symbol;Acc:HGNC:13813]
23. OGFOD3 ENSGALG00000001618 2438 0.997 - - - - - - - 0.997 - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
24. HADHA ENSGALG00000016536 3791 0.997 - - - - - - - 0.997 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha [Source:NCBI gene;Acc:395929]
25. PSTK 2511 0.996 - - - - - - - 0.996 - - phosphoseryl-tRNA kinase, transcript variant X1
26. ARID3C ENSGALG00000005839 646 0.996 - - - - - - - 0.996 - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
27. SPTBN5 395 0.996 - - - - - - - 0.996 - - spectrin beta, non-erythrocytic 5
28. C1H11ORF67 C1H11ORF67 2089 0.996 - - - - - - - 0.996 - -
29. URI1 ENSGALG00000004506 6024 0.996 - - - - - - - 0.996 - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
30. BOD1L1 ENSGALG00000026470 9250 0.994 - - - - - - - 0.994 - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
31. MCM2 ENSGALG00000006037 13458 0.993 - - - - - - - 0.993 - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
32. ANGPTL2 ENSGALG00000000927 2580 0.992 - - - - - - - 0.992 - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
33. PGAP2 ENSGALG00000027762 2583 0.991 - - - - - - - 0.991 - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
34. GLMN ENSGALG00000005959 2049 0.991 - - - - - - - 0.991 - - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
35. TNFRSF1A ENSGALG00000039461 1569 0.99 - - - - - - - 0.990 - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
36. RILPL2 ENSGALG00000003321 5632 0.989 - - - - - - - 0.989 - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
37. NCAPD2 ENSGALG00000039448 8658 0.989 - - - - - - - 0.989 - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
38. TSG101 ENSGALG00000006312 8289 0.988 - - - - - - - 0.988 - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
39. TPMT ENSGALG00000012687 9537 0.983 - - - - - - - 0.983 - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
40. RWDD3 ENSGALG00000038421 10909 0.981 - - - - - - - 0.981 - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
41. PPP1R7 ENSGALG00000031766 22187 0.978 - - - - - - - 0.978 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
42. PPP4R2 ENSGALG00000007810 15127 0.972 - - - - - - - 0.972 - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
43. ZFX ENSGALG00000016327 5470 0.971 - - - - - - - 0.971 - - zinc finger protein, X-linked, transcript variant X4
44. MYLK ENSGALG00000011708 10434 0.963 - - - - - - - 0.963 - - Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
45. GAB1 ENSGALG00000009898 2741 0.963 - - - - - - - 0.963 - - GRB2 associated binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4066]
46. TMEM9B ENSGALG00000005908 14074 0.961 - - - - - - - 0.961 - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
47. HOXD8 ENSGALG00000037272 4338 0.958 - - - - - - - 0.958 - - homeobox D8 [Source:NCBI gene;Acc:396301]
48. EIF1B ENSGALG00000038646 9508 0.946 - - - - - - - 0.946 - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
49. PTDSS1 ENSGALG00000030185 5515 0.939 - - - - - - - 0.939 - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
50. PDGFRA ENSGALG00000013929 12501 0.917 - - - - - - - 0.917 - - platelet-derived growth factor receptor, alpha polypeptide [Source:NCBI gene;Acc:395509]
51. KDM5B ENSGALG00000038948 50645 0.908 - - - - - - 0.908 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
52. LOC419404 ENSGALG00000021676 12078 0.905 - - - - - - - 0.905 - - uncharacterized LOC419404
53. TBC1D22B ENSGALG00000039130 3158 0.904 - - - - - - - 0.904 - - TBC1 domain family member 22B [Source:HGNC Symbol;Acc:HGNC:21602]
54. RALB ENSGALG00000026493 14590 0.903 - - - - - - - 0.903 - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
55. HNRNPAB ENSGALG00000014381 41009 0.896 - - - - - - - 0.896 - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
56. STK4 ENSGALG00000004098 11366 0.886 - - - - - - - 0.886 - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
57. NDUFC2 ENSGALG00000029172 26136 0.884 - - - - - - - 0.884 - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
58. LEPROT ENSGALG00000011047 7132 0.88 - - - - - - 0.880 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
59. LMAN1 ENSGALG00000034821 12788 0.88 - - - - - - 0.880 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
60. RNF4 ENSGALG00000015668 15780 0.878 - - - - - - - 0.878 - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
61. NUP88 ENSGALG00000032280 9847 0.877 - - - - - - 0.877 - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
62. ARL5B ENSGALG00000008557 12887 0.876 - - - - - - - 0.876 - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
63. SLC30A5 ENSGALG00000014787 5573 0.875 - - - - - - - 0.875 - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
64. RCN1 RCN1 11758 0.873 - - - - - - 0.873 - - -
65. ETFDH ENSGALG00000009442 7671 0.872 - - - - - - - 0.872 - - electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
66. SLC25A17 ENSGALG00000012013 13948 0.869 - - - - - - 0.869 - - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
67. PHAX ENSGALG00000014691 8114 0.866 - - - - - - 0.866 - - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
68. USO1 ENSGALG00000010878 9506 0.865 - - - - - - - 0.865 - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
69. CDC20 ENSGALG00000009971 11197 0.864 - - - - - - 0.864 - - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
70. PPA1 ENSGALG00000004442 33355 0.864 - - - - - - - 0.864 - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
71. GLRX5 ENSGALG00000011079 28943 0.862 - - - - - - 0.862 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
72. CASP3 ENSGALG00000010638 11572 0.862 - - - - - - 0.862 - - - caspase 3 [Source:NCBI gene;Acc:395476]
73. RFC3 ENSGALG00000017064 7011 0.861 - - - - - - 0.861 - - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
74. HMGN1 ENSGALG00000016067 17375 0.861 - - - - - - - 0.861 - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
75. SRRM1 ENSGALG00000001283 23820 0.856 - - - - - - 0.856 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
76. SDF2L1 ENSGALG00000031982 6084 0.856 - - - - - - 0.856 - - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
77. WDR61 ENSGALG00000003221 11352 0.856 - - - - - - 0.856 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
78. COPB2 ENSGALG00000005357 15208 0.855 - - - - - - 0.855 - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
79. SCP2 ENSGALG00000010652 19563 0.853 - - - - - - 0.853 - - - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
80. DHX15 ENSGALG00000014395 24041 0.853 - - - - - - - 0.853 - - DEAH-box helicase 15 [Source:NCBI gene;Acc:422813]
81. NEK6 ENSGALG00000001118 20333 0.852 - - - - - - - 0.852 - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
82. PFDN2 ENSGALG00000026374 22020 0.851 - - - - - - 0.851 - - - prefoldin subunit 2 [Source:HGNC Symbol;Acc:HGNC:8867]
83. HSPE1 ENSGALG00000009070 87567 0.85 - - - - - - - 0.850 - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
84. CPSF6 ENSGALG00000019355 7634 0.848 - - - - - - 0.848 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
85. SEC22B ENSGALG00000039704 16080 0.847 - - - - - - 0.847 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
86. SPCS3 ENSGALG00000010839 19106 0.847 - - - - - - 0.847 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
87. MRPL54 ENSGALG00000027611 39450 0.845 - - - - - - 0.845 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
88. RBM5 30998 0.845 - - - - - - - 0.845 - - RNA binding motif protein 5, transcript variant X1
89. CIAPIN1 ENSGALG00000029268 23036 0.845 - - - - - - 0.845 - - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
90. TUBB2C TUBB2C 44249 0.845 - - - - - - 0.845 - - -
91. WTAP ENSGALG00000011660 10811 0.844 - - - - - - 0.844 - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
92. UQCRH ENSGALG00000017380 55734 0.843 - - - - - - 0.843 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
93. ARPC1A ENSGALG00000004693 11583 0.843 - - - - - - 0.843 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
94. BUB1 ENSGALG00000008233 11536 0.842 - - - - - - 0.842 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
95. SRSF6 ENSGALG00000000990 12424 0.84 - - - - - - 0.840 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
96. PBRM1 ENSGALG00000037455 6450 0.84 - - - - - - 0.840 - - - polybromo 1 [Source:NCBI gene;Acc:396074]
97. SLC25A3 ENSGALG00000011514 62606 0.84 - - - - - - 0.840 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
98. RNF219 ENSGALG00000016911 4458 0.84 - - - - - - 0.840 - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
99. BRP44L BRP44L 30452 0.839 - - - - - - 0.839 - - -
100. HNRNPLL ENSGALG00000008504 14719 0.838 - - - - - - 0.838 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]

There are 411 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA