Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SST

Gene Name Gene ID Reads Annotation
SST ENSGALG00000007361 1383 somatostatin [Source:NCBI gene;Acc:396279]











Genes with expression patterns similar to SST

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SST ENSGALG00000007361 1383 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 somatostatin [Source:NCBI gene;Acc:396279]
2. C9H2ORF82 ENSGALG00000040264 4201 6.62 - - 0.936 0.800 0.931 0.700 0.805 0.843 0.903 0.702 chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
3. COL9A2 ENSGALG00000027526 4685 6.033 - - 0.894 0.822 0.836 0.942 0.884 0.870 0.785 - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
4. COL8A1 ENSGALG00000015253 2505 5.978 - - 0.892 0.820 0.971 0.896 0.799 0.805 - 0.795 collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
5. RAB38 ENSGALG00000028018 1046 5.921 - - 0.955 0.803 0.869 0.894 0.770 0.880 - 0.750 RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
6. COL9A3 ENSGALG00000005628 2842 5.877 - - 0.949 0.803 0.880 - 0.816 0.884 0.731 0.814 collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
7. SPON2 ENSGALG00000038433 1240 5.867 - - - 0.756 0.785 0.859 0.877 0.875 0.889 0.826 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
8. T ENSGALG00000011489 2619 5.759 - - 0.913 0.817 0.922 0.793 0.845 - 0.704 0.765 T brachyury transcription factor [Source:NCBI gene;Acc:395782]
9. SCARA3 ENSGALG00000026651 2559 4.865 - - 0.924 - 0.795 0.801 0.738 0.824 0.783 - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
10. LECT1 LECT1 12694 4.769 - - 0.817 0.706 0.796 - 0.777 0.839 - 0.834
11. COL9A1 ENSGALG00000015970 3788 4.327 - - 0.893 0.822 0.938 0.854 0.820 - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
12. OSF-2 OSF-2 10433 4.164 - - 0.830 - - - 0.837 0.865 0.720 0.912
13. TAC1 ENSGALG00000009737 2211 4.127 - - 0.980 0.812 - 0.747 0.761 0.827 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
14. SAMD3 ENSGALG00000032409 459 4.077 - - - 0.785 0.720 0.898 - 0.907 - 0.767 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
15. OCA2 ENSGALG00000016740 421 4.067 - - - 0.807 0.778 0.870 - 0.878 - 0.734 OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
16. TIMP3 ENSGALG00000028627 8706 4.006 - - 0.848 0.749 0.775 - - 0.897 0.737 - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
17. EMILIN3 ENSGALG00000030012 6200 4.003 - - 0.795 0.809 0.854 0.761 0.784 - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
18. WWP2 ENSGALG00000000699 5040 3.242 - - 0.902 - - 0.779 0.860 0.701 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
19. SHH ENSGALG00000006379 1943 3.064 - - 0.817 - - - 0.770 0.710 - 0.767 sonic hedgehog [Source:NCBI gene;Acc:395615]
20. SLC15A5 ENSGALG00000013097 213 2.503 - - - - 0.791 0.975 0.737 - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
21. ENSGALG00000008822 ENSGALG00000008822 221 2.486 - - 0.778 - - 0.926 - - - 0.782
22. ACAN ENSGALG00000006725 184 2.426 - - - - 0.753 - - 0.780 - 0.893 aggrecan [Source:NCBI gene;Acc:395798]
23. ZNF385B ENSGALG00000009012 290 2.384 - - 0.817 - - 0.855 - 0.712 - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
24. HPGDS ENSGALG00000010402 343 2.301 - - 0.704 - 0.747 - - - - 0.850 hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
25. LRRTM1 ENSGALG00000015967 85 2.3 - - 0.856 - - 0.737 - 0.707 - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
26. TMEM163 ENSGALG00000012190 72 1.775 - - 0.813 - - 0.962 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
27. ENSGALG00000013409 ENSGALG00000013409 4 1.737 - - - - - 0.962 - - - 0.775
28. BAFF BAFF 40 1.703 - - - - - 0.962 - - - 0.741
29. POMC ENSGALG00000016600 99 1.7 - - - - 0.920 - - 0.780 - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
30. MAVS ENSGALG00000040428 1 1.669 - - - - - 0.962 - 0.707 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
31. PABPN1L ENSGALG00000006242 3 1.669 - - - - - 0.962 - 0.707 - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
32. C17orf105 C17orf105 11 1.669 - - - - - 0.962 - 0.707 - -
33. NPY7R ENSGALG00000021303 215 1.641 - - - 0.776 - 0.865 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
34. DCLRE1B ENSGALG00000028626 48 1.64 - - - - - - - 0.814 - 0.826 DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
35. PCDH17 ENSGALG00000016941 1006 1.628 - - - - - 0.826 - 0.802 - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
36. SCIN ENSGALG00000010770 883 1.603 - - 0.807 0.796 - - - - - - scinderin [Source:NCBI gene;Acc:420588]
37. PAX1 ENSGALG00000039040 3339 1.594 - - 0.864 - 0.730 - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
38. TXNRD1 ENSGALG00000035345 4784 1.575 - - 0.827 0.748 - - - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
39. EPB41L3 ENSGALG00000038678 5863 1.554 - - 0.807 0.747 - - - - - - erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]
40. RRAD ENSGALG00000005140 183 1.542 - - - - - 0.831 - - - 0.711 RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
41. RGS4 ENSGALG00000002564 201 1.539 - - - - - 0.755 0.784 - - - regulator of G-protein signaling 4 [Source:NCBI gene;Acc:378901]
42. SLC24A4 ENSGALG00000010793 238 1.519 - - - - - 0.781 - 0.738 - - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
43. SPOCK1 ENSGALG00000006258 2892 1.483 - - 0.752 - - - - - - 0.731 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:HGNC Symbol;Acc:HGNC:11251]
44. SOX9 ENSGALG00000004386 14802 1.473 - - 0.751 - 0.722 - - - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
45. ARHGAP39 ENSGALG00000001536 15 1.471 - - - - - - - 0.707 - 0.764 Rho GTPase activating protein 39, transcript variant X2
46. CYP1B1 ENSGALG00000025822 3143 1.47 - - 0.769 - - - - - 0.701 - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
47. ENSGALG00000010113 ENSGALG00000010113 508 1.465 - - 0.753 - - - 0.712 - - -
48. TRPC3 ENSGALG00000011875 9 1.461 - - - - - 0.722 - - - 0.739 transient receptor potential cation channel subfamily C member 3 [Source:NCBI gene;Acc:374153]
49. IYD ENSGALG00000012392 315 1.441 - - - - - 0.723 - - - 0.718 iodotyrosine deiodinase [Source:HGNC Symbol;Acc:HGNC:21071]
50. SLC6A1 ENSGALG00000004921 118 1.431 - - - - - 0.724 - 0.707 - - solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
51. FARP2 ENSGALG00000005788 6 0.962 - - - - - 0.962 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
52. ENSGALG00000028116 ENSGALG00000028116 0 0.962 - - - - - 0.962 - - - -
53. HID1 ENSGALG00000007808 2 0.962 - - - - - 0.962 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
54. CORO6 ENSGALG00000028949 21 0.962 - - - - - 0.962 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
55. MAGI1 ENSGALG00000007431 23 0.962 - - - - - 0.962 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
56. RPS6KA2 ENSGALG00000011473 2 0.962 - - - - - 0.962 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
57. GTF3C3 ENSGALG00000007958 6 0.962 - - - - - 0.962 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
58. CBL ENSGALG00000029077 6 0.962 - - - - - 0.962 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
59. MINPP1 ENSGALG00000003695 1 0.962 - - - - - 0.962 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
60. DNMBP ENSGALG00000007304 4 0.962 - - - - - 0.962 - - - - dynamin binding protein
61. VPS37D 3 0.962 - - - - - 0.962 - - - - VPS37D, ESCRT-I subunit
62. ENPP4 ENSGALG00000016708 18 0.962 - - - - - 0.962 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
63. DSCAML1 ENSGALG00000007314 1 0.962 - - - - - 0.962 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
64. LPP ENSGALG00000007337 18 0.962 - - - - - 0.962 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
65. OVST_1 ENSGALG00000011930 9 0.962 - - - - - 0.962 - - - - ovostatin [Source:NCBI gene;Acc:396151]
66. gga-mir-301a ENSGALG00000029989 5 0.962 - - - - - 0.962 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
67. AGRP ENSGALG00000002244 27 0.962 - - - - - 0.962 - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
68. SNORA24 SNORA24 2 0.962 - - - - - 0.962 - - - -
69. SOD3 ENSGALG00000018557 16 0.962 - - - - - 0.962 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
70. FKHR FKHR 1 0.962 - - - - - 0.962 - - - -
71. GAMT ENSGALG00000040182 5 0.962 - - - - - 0.962 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
72. gga-mir-10a ENSGALG00000021952 4 0.962 - - - - - 0.962 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
73. ERI3 ENSGALG00000010106 995 0.962 - - - - - 0.962 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
74. AATK ENSGALG00000006901 1 0.962 - - - - - 0.962 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
75. TRIM25 ENSGALG00000003144 12 0.962 - - - - - 0.962 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
76. TBX15 0 0.962 - - - - - 0.962 - - - - T-box 15
77. MFSD11 ENSGALG00000001777 8 0.962 - - - - - 0.962 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
78. SLC26A6 ENSGALG00000026089 3 0.962 - - - - - 0.962 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
79. STRA8 ENSGALG00000011722 4 0.962 - - - - - 0.962 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
80. MNOC MNOC 1 0.962 - - - - - 0.962 - - - -
81. AK4 ENSGALG00000011035 9 0.962 - - - - - 0.962 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
82. TMEM189 ENSGALG00000026906 14 0.962 - - - - - 0.962 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
83. NME4 ENSGALG00000002688 1 0.962 - - - - - 0.962 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
84. LDB1 ENSGALG00000007641 2 0.962 - - - - - 0.962 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
85. KATNAL2 ENSGALG00000041882 1 0.962 - - - - - 0.962 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
86. PPM1F ENSGALG00000039121 26 0.962 - - - - - 0.962 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
87. WDR41 ENSGALG00000004350 16 0.962 - - - - - 0.962 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
88. RNF217 ENSGALG00000013651 1 0.962 - - - - - 0.962 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
89. WFDC2 ENSGALG00000031164 37 0.962 - - - - - 0.962 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
90. RHBDF2 ENSGALG00000001943 1 0.962 - - - - - 0.962 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
91. PTPN3 ENSGALG00000022909 6 0.962 - - - - - 0.962 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
92. SEC16A ENSGALG00000002364 19 0.962 - - - - - 0.962 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
93. PRKG2 ENSGALG00000010909 1 0.962 - - - - - 0.962 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
94. MFSD6 ENSGALG00000041884 1 0.962 - - - - - 0.962 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
95. ENSGALG00000013079 ENSGALG00000013079 12 0.962 - - - - - 0.962 - - - -
96. PITPNC1L ENSGALG00000002610 3 0.962 - - - - - 0.962 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
97. FAM160A2 ENSGALG00000003416 23 0.962 - - - - - 0.962 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
98. C1H7ORF60 C1H7ORF60 3 0.962 - - - - - 0.962 - - - -
99. SNX8 ENSGALG00000004255 4 0.962 - - - - - 0.962 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
100. AFTPH ENSGALG00000008828 21 0.962 - - - - - 0.962 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]

There are 178 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA