Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SSRP1

Gene Name Gene ID Reads Annotation
SSRP1 ENSGALG00000007520 18849 structure specific recognition protein 1 [Source:NCBI gene;Acc:396509]











Genes with expression patterns similar to SSRP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SSRP1 ENSGALG00000007520 18849 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structure specific recognition protein 1 [Source:NCBI gene;Acc:396509]
2. TFB2M ENSGALG00000010651 4374 1.556 - - - - - - 0.793 0.763 - - transcription factor B2, mitochondrial
3. MRPL2 ENSGALG00000008597 16500 1.527 - - - - - - 0.742 0.785 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
4. CHRAC1 ENSGALG00000040823 5695 1.509 - - - - - - 0.751 0.758 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
5. SNRNP40 ENSGALG00000000615 32298 1.497 - - 0.738 - - - 0.759 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
6. EVL ENSGALG00000011209 5440 1.494 - - - - - - 0.757 0.737 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
7. NDUFA12 ENSGALG00000011325 19807 1.47 - - - - - - 0.739 0.731 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
8. MRPL50 ENSGALG00000015543 11649 1.461 - - - - - - 0.734 0.727 - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
9. TIMM8A ENSGALG00000004963 14263 1.458 - - - - - - 0.715 0.743 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
10. R3HDM1 ENSGALG00000012246 6580 1.457 - - - - - - 0.750 0.707 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
11. EXOSC10 ENSGALG00000003086 3223 1.457 - - - - - - 0.727 0.730 - - exosome component 10 [Source:NCBI gene;Acc:419454]
12. RRP36 ENSGALG00000028056 7560 1.45 - - - - - - 0.707 0.743 - - ribosomal RNA processing 36
13. C11H16ORF80 C11H16ORF80 18673 1.446 - - - - - - 0.705 0.741 - -
14. GNAI2 ENSGALG00000035645 9535 1.428 - - - - - - 0.713 0.715 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
15. ASH2L ENSGALG00000003233 4814 1.421 - - - - - - 0.708 0.713 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
16. MPI ENSGALG00000029296 11781 1.419 - - - - - - 0.704 0.715 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
17. PUS1 ENSGALG00000002354 10153 0.848 - - - - - - - 0.848 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
18. PCBP4 ENSGALG00000027695 7937 0.833 - - - - - - - 0.833 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
19. PHPT1 ENSGALG00000039061 17343 0.827 - - - - - - - 0.827 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
20. PSMD13 ENSGALG00000043684 14720 0.82 - - - - - - - 0.820 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
21. UBFD1 ENSGALG00000006117 5242 0.817 - - - - - - - 0.817 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
22. MED21 ENSGALG00000027435 5766 0.808 - - - - - - - 0.808 - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
23. UROD ENSGALG00000010219 5810 0.807 - - - - - - - 0.807 - - uroporphyrinogen decarboxylase, transcript variant X2
24. DLG3 ENSGALG00000041900 3016 0.807 - - - - - - - 0.807 - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
25. CEP70 ENSGALG00000012087 7992 0.803 - - - - - - - 0.803 - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
26. GSK3B ENSGALG00000014977 7950 0.802 - - - - - - - 0.802 - - glycogen synthase kinase 3 beta [Source:HGNC Symbol;Acc:HGNC:4617]
27. ATP5A1 ATP5A1 32367 0.802 - - - - - - - 0.802 - -
28. DNMT3B ENSGALG00000041461 12959 0.794 - - - - - - - 0.794 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
29. CDK2AP1 ENSGALG00000034919 5469 0.794 - - - - - - 0.794 - - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
30. GABPB1 ENSGALG00000023440 5676 0.794 - - - - - - - 0.794 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
31. SQSTM1 ENSGALG00000035804 2238 0.793 - - - - - - - 0.793 - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
32. AZIN1 ENSGALG00000029295 11085 0.792 - - - - - - - 0.792 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
33. MPP1 ENSGALG00000005071 3865 0.789 - - - - - - - 0.789 - - membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
34. OSBPL11 ENSGALG00000012059 2523 0.788 - - - - - - - 0.788 - - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
35. ACTR8 ENSGALG00000005385 3647 0.787 - - - - - - - 0.787 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
36. CDR2L ENSGALG00000026295 4142 0.786 - - - - - - - 0.786 - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
37. EIF5B ENSGALG00000016764 30681 0.786 - - - - - - - 0.786 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
38. CELF1 ENSGALG00000008097 4717 0.784 - - - - - - - 0.784 - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
39. TIMM13 ENSGALG00000028937 32013 0.784 - - - - - - - 0.784 - - translocase of inner mitochondrial membrane 13 [Source:NCBI gene;Acc:100859352]
40. MAU2 ENSGALG00000002969 10604 0.783 - - - - - - - 0.783 - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
41. Sep-09 Sep-09 4723 0.783 - - - - - - - 0.783 - -
42. PDLIM4 ENSGALG00000039872 7823 0.78 - - - - - - - 0.780 - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
43. AP1B1 ENSGALG00000042213 4828 0.78 - - - - - - 0.780 - - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
44. RYK ENSGALG00000006488 10533 0.78 - - - - - - - 0.780 - - receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:10481]
45. TRAPPC4 ENSGALG00000007707 3568 0.78 - - - - - - - 0.780 - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
46. CDC23 ENSGALG00000007610 11945 0.78 - - - - - - 0.780 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
47. NUBP2 ENSGALG00000002316 3643 0.779 - - - - - - - 0.779 - - nucleotide binding protein 2 [Source:NCBI gene;Acc:416402]
48. MBD4 ENSGALG00000020747 3644 0.779 - - - - - - - 0.779 - - methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
49. WFDC1 ENSGALG00000005503 6152 0.779 - - - - - - 0.779 - - - WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
50. SNRNP27 ENSGALG00000013883 22212 0.778 - - - - - - 0.778 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
51. SLCO5A1 ENSGALG00000029842 4510 0.777 - - - - - - - 0.777 - - solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]
52. DOHH ENSGALG00000017524 9420 0.776 - - - - - - - 0.776 - - deoxyhypusine hydroxylase [Source:NCBI gene;Acc:427066]
53. LLPH ENSGALG00000019358 20976 0.775 - - - - - - 0.775 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
54. PAPSS1 ENSGALG00000010542 5631 0.774 - - - - - - - 0.774 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
55. ACBD5 ENSGALG00000007519 1646 0.773 - - - - - - 0.773 - - - acyl-CoA binding domain containing 5 [Source:NCBI gene;Acc:420488]
56. DCPS ENSGALG00000031143 10191 0.773 - - - - - - - 0.773 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
57. MRPL20 ENSGALG00000001542 28764 0.773 - - 0.773 - - - - - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
58. WASF1 ENSGALG00000015066 5628 0.772 - - - - - - 0.772 - - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
59. SAT1 ENSGALG00000016348 8469 0.771 - - - - - - - 0.771 - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
60. URI1 ENSGALG00000004506 6024 0.771 - - - - - - 0.771 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
61. NUP85 ENSGALG00000007974 21249 0.769 - - - - - - - 0.769 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
62. NUP205 ENSGALG00000011662 4157 0.768 - - - - - - - 0.768 - - nucleoporin 205
63. PLEKHA5 ENSGALG00000013134 3656 0.767 - - - - - - - 0.767 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
64. CAPN15 ENSGALG00000002018 3353 0.767 - - - - - - - 0.767 - - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
65. TAF3 ENSGALG00000006731 15569 0.767 - - - - - - 0.767 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
66. TXNRD3 ENSGALG00000039363 8016 0.766 - - - - - - - 0.766 - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
67. WWC3 ENSGALG00000034834 9392 0.766 - - - - - - - 0.766 - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
68. STK3 ENSGALG00000032850 6339 0.766 - - - - - - - 0.766 - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
69. GLRX3 ENSGALG00000010464 22578 0.765 - - - - - - 0.765 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
70. UTP11L UTP11L 11927 0.764 - - - - - - 0.764 - - -
71. UPF2 ENSGALG00000033772 9548 0.763 - - - - - - 0.763 - - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
72. CNOT11 ENSGALG00000039563 11251 0.763 - - - - - - - 0.763 - - CCR4-NOT transcription complex subunit 11
73. NDUFS5 ENSGALG00000003625 27698 0.763 - - - - - - - 0.763 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
74. RPE ENSGALG00000002847 7644 0.762 - - - - - - - 0.762 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
75. CDT1 ENSGALG00000013784 6801 0.762 - - - - - - 0.762 - - - chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]
76. AZI1 AZI1 6732 0.762 - - - - - - - 0.762 - -
77. RPA3 ENSGALG00000010700 6212 0.761 - - - - - - - 0.761 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
78. RPP40 ENSGALG00000036074 2068 0.761 - - - - - - 0.761 - - - ribonuclease P/MRP subunit p40 [Source:HGNC Symbol;Acc:HGNC:20992]
79. RPS6KA RPS6KA 6745 0.761 - - - - - - 0.761 - - -
80. NASP ENSGALG00000010255 28423 0.761 - - - - - - 0.761 - - - nuclear autoantigenic sperm protein, transcript variant X3
81. METAP2 ENSGALG00000011377 16311 0.761 - - - - - - 0.761 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
82. APIP ENSGALG00000031286 6838 0.76 - - - - - - 0.760 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
83. DPYSL2 ENSGALG00000000227 9668 0.76 - - - - - - 0.760 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
84. EPT1 EPT1 2193 0.76 - - - - - - - 0.760 - -
85. TMEM258 ENSGALG00000038292 31116 0.759 - - - - - - - 0.759 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
86. MTRF1L ENSGALG00000013609 1581 0.759 - - - - - - - 0.759 - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
87. CEP78 ENSGALG00000015179 5227 0.758 - - - - - - 0.758 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
88. DNM1L ENSGALG00000012929 6174 0.758 - - - - - - 0.758 - - - dynamin 1 like [Source:NCBI gene;Acc:418132]
89. LIMD2 ENSGALG00000000529 30617 0.758 - - - - - - 0.758 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
90. SFPQ ENSGALG00000002514 66832 0.758 - - - - - 0.758 - - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
91. SIVA1 ENSGALG00000011619 15130 0.757 - - - - - - 0.757 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
92. PSMB2 ENSGALG00000026421 51885 0.757 - - - - - - 0.757 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
93. TRAPPC6B ENSGALG00000010157 7567 0.757 - - - - - - - 0.757 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
94. TRRAP ENSGALG00000003596 6032 0.757 - - - - - - - 0.757 - - transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
95. DCTN4 ENSGALG00000004534 8442 0.757 - - - - - - - 0.757 - - dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518]
96. RUVBL1 ENSGALG00000005931 9379 0.756 - - - - - - 0.756 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
97. TFDP2 ENSGALG00000025759 13407 0.755 - - - - - - - 0.755 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
98. PLK1 ENSGALG00000006110 12892 0.755 - - - - - - - 0.755 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
99. SF3B3 ENSGALG00000002531 19397 0.755 - - - - - - 0.755 - - - splicing factor 3b subunit 3, transcript variant X2
100. MFAP1 ENSGALG00000028295 6043 0.754 - - - - - - - 0.754 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]

There are 295 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA