Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SSR2

Gene Name Gene ID Reads Annotation
SSR2 ENSGALG00000000764 32190 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]











Genes with expression patterns similar to SSR2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SSR2 ENSGALG00000000764 32190 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
2. SLC12A4 ENSGALG00000034179 5674 2.666 - - - - - - 0.999 0.822 - 0.845 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
3. TMEM165 ENSGALG00000027886 5468 2.615 - - - - 0.984 - - 0.705 - 0.926 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
4. POLR2B ENSGALG00000011387 4864 2.613 - - - - 0.983 - - 0.774 - 0.856 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
5. TRAPPC12 ENSGALG00000016387 2593 2.513 - - - 0.820 0.990 - - - - 0.703 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
6. PLAA ENSGALG00000001782 5459 2.481 - - - 0.764 0.976 - - 0.741 - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
7. MSH6 ENSGALG00000008957 6396 2.466 - - - 0.727 - - 0.999 0.740 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
8. PARVB ENSGALG00000014201 27559 2.229 - - - 0.738 0.729 - - - - 0.762 parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
9. AP1G1 12403 1.927 - - - - - - 0.998 - - 0.929 adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
10. MIPEP ENSGALG00000017118 8666 1.907 - - - - - - 0.999 - - 0.908 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
11. SPC25 ENSGALG00000010900 14238 1.907 - - - - - - 0.995 - - 0.912 SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
12. ERLIN2 ENSGALG00000003092 18251 1.858 - - - - - - 0.979 0.879 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
13. LY6E ENSGALG00000041621 16227 1.851 - - - - 0.951 - - - - 0.900 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
14. ITGA9 ENSGALG00000029378 415 1.848 - - - 0.866 - - - - - 0.982 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
15. PNRC2 ENSGALG00000004122 19228 1.833 - - - - 0.943 - - - - 0.890 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
16. EAPP ENSGALG00000010007 5080 1.831 - - - - 0.993 - - - - 0.838 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
17. ANAPC2 ENSGALG00000008625 8822 1.822 - - - - - - 0.999 - - 0.823 anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
18. PPFIA1 ENSGALG00000035774 5258 1.812 - - - 0.851 - - - - - 0.961 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
19. PSMC2 ENSGALG00000008236 25980 1.801 - - - - 0.933 - - - - 0.868 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
20. COIL ENSGALG00000003158 7806 1.799 - - - - 0.990 - - 0.809 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
21. WDSUB1 ENSGALG00000012574 2038 1.798 - - - 0.818 - - - - - 0.980 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
22. PSMD14 ENSGALG00000011128 13335 1.789 - - - 0.792 - - 0.997 - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
23. NDUFS5 ENSGALG00000003625 27698 1.787 - - - - - - 0.999 0.788 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
24. GFPT1 ENSGALG00000036391 14025 1.787 - - - 0.831 0.956 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
25. RWDD3 ENSGALG00000038421 10909 1.776 - - - - - - 0.998 - - 0.778 RWD domain containing 3 [Source:NCBI gene;Acc:424481]
26. TK2 ENSGALG00000034216 5394 1.764 - - - 0.786 0.978 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
27. NANS ENSGALG00000015320 10552 1.763 - - - - - - 0.995 0.768 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
28. NAP1L1 ENSGALG00000010238 14506 1.761 - - - - 0.987 - - - - 0.774 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
29. STRAP ENSGALG00000013092 13100 1.761 - - - 0.790 0.971 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
30. AGPS ENSGALG00000009236 2250 1.749 - - - - - - - 0.805 - 0.944 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
31. NTPCR ENSGALG00000011015 8652 1.748 - - - - - - 0.998 0.750 - - nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
32. PSPC1 ENSGALG00000017142 13036 1.748 - - - - 0.975 - - - - 0.773 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
33. ADD3 ENSGALG00000008542 13814 1.737 - - - - 0.951 - - - - 0.786 adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
34. ASB9 ENSGALG00000016563 2780 1.735 - - - 0.791 - - - - - 0.944 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
35. GCSH ENSGALG00000032679 29231 1.73 - - - - - - - 0.818 - 0.912 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
36. GXYLT1 ENSGALG00000009532 5682 1.729 - - - - - - - 0.775 - 0.954 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
37. ATG16L1 ENSGALG00000001619 3562 1.729 - - - 0.789 - - - - - 0.940 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
38. IGDCC4 ENSGALG00000007410 5457 1.72 - - - 0.749 0.971 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
39. PRDM4 ENSGALG00000012619 876 1.719 - - - 0.858 - - - - - 0.861 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
40. PGD ENSGALG00000002797 15115 1.719 - - - 0.767 - - - - - 0.952 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
41. CBWD1 ENSGALG00000010147 2765 1.718 - - - 0.731 0.987 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
42. ARHGAP21 ENSGALG00000007721 3961 1.71 - - - - - - - 0.729 - 0.981 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
43. GRTP1 ENSGALG00000016828 3145 1.71 - - - - - - - 0.760 - 0.950 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
44. CLSPN ENSGALG00000002346 2590 1.706 - - - 0.767 - - - - - 0.939 claspin [Source:NCBI gene;Acc:428223]
45. INTS10 ENSGALG00000010130 6320 1.706 - - - 0.738 - - - - - 0.968 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
46. FAM174A ENSGALG00000026203 8369 1.703 - - - - - - 0.997 0.706 - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
47. TLCD1 ENSGALG00000003973 17569 1.698 - - - 0.709 0.989 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
48. GPN3 ENSGALG00000003807 6320 1.695 - - - - 0.966 - - 0.729 - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
49. SPDL1 ENSGALG00000001942 4403 1.695 - - - - - - - 0.735 - 0.960 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
50. KIAA1143 ENSGALG00000035952 6735 1.693 - - - 0.853 - - - 0.840 - - KIAA1143 [Source:NCBI gene;Acc:420709]
51. TMEM243 ENSGALG00000006633 1592 1.693 - - - - - - - 0.739 - 0.954 transmembrane protein 243 [Source:HGNC Symbol;Acc:HGNC:21707]
52. FANCL ENSGALG00000030022 7423 1.683 - - - - - - - 0.768 - 0.915 FA complementation group L [Source:NCBI gene;Acc:421202]
53. USP10 ENSGALG00000005674 7768 1.675 - - - - 0.816 - - - - 0.859 ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
54. ERI2 1087 1.672 - - - - - - - 0.706 - 0.966 ERI1 exoribonuclease family member 2, transcript variant X1
55. BTG1L ENSGALG00000004676 2293 1.661 - - - 0.885 - - - - - 0.776 protein BTG1-like
56. GTF2F2 ENSGALG00000016974 7524 1.659 - - - 0.779 - - - - - 0.880 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
57. MCPH1 ENSGALG00000016332 2097 1.654 - - - - - - - 0.772 - 0.882 microcephalin 1 [Source:NCBI gene;Acc:100125976]
58. KIF11 ENSGALG00000030597 5528 1.643 - - - - - - - 0.714 - 0.929 kinesin family member 11 [Source:NCBI gene;Acc:423809]
59. GPR162 ENSGALG00000022926 7181 1.64 - - - - - - - 0.816 - 0.824 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
60. COX17 ENSGALG00000014981 5646 1.639 - - - - - - - 0.704 - 0.935 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
61. PEX2 ENSGALG00000035752 4427 1.635 - - - - - - - 0.808 - 0.827 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
62. PFKL ENSGALG00000006543 4361 1.633 - - - 0.856 - - - 0.777 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
63. BZW2 ENSGALG00000010809 29213 1.63 - - - - - - - 0.764 - 0.866 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
64. MRPS30 ENSGALG00000014874 3416 1.622 - - - 0.860 - - - - - 0.762 mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
65. COG6 ENSGALG00000017035 2777 1.617 - - - - - - - 0.712 - 0.905 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
66. ARPC1A ENSGALG00000004693 11583 1.615 - - - 0.827 - - - - - 0.788 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
67. PWP1 ENSGALG00000012631 10536 1.615 - - - - - - - 0.762 - 0.853 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
68. HINT3 ENSGALG00000044342 5674 1.608 - - - 0.807 - - - 0.801 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
69. BAG1 ENSGALG00000013157 4014 1.608 - - - - - - - 0.793 - 0.815 BCL2 associated athanogene 1 [Source:NCBI gene;Acc:420967]
70. RTN4IP1 ENSGALG00000015343 4366 1.602 - - - 0.859 - - - 0.743 - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
71. PAK1IP1 ENSGALG00000012724 10907 1.602 - - - - - - - 0.767 - 0.835 PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
72. ATP5A1 ATP5A1 32367 1.599 - - - - 0.831 - - 0.768 - -
73. ARID4B ENSGALG00000034003 5364 1.595 - - - - 0.821 - - 0.774 - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
74. CSRP2BP CSRP2BP 4679 1.59 - - - - - - - 0.788 - 0.802
75. BAG5 ENSGALG00000031062 4498 1.587 - - - 0.865 - - - 0.722 - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
76. SMC5 ENSGALG00000015118 1799 1.584 - - - 0.730 - - - - - 0.854 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
77. SDF2L1 ENSGALG00000031982 6084 1.582 - - - - - - - 0.802 - 0.780 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
78. CHMP4B ENSGALG00000002095 17422 1.581 - - - - - - - 0.782 - 0.799 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
79. TTLL5 ENSGALG00000010340 4875 1.58 - - - 0.809 - - - 0.771 - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
80. ZNF217 ZNF217 14511 1.58 - - - - - - - 0.805 - 0.775
81. ENSGALG00000007514 ENSGALG00000007514 4866 1.576 - - - 0.812 - - - 0.764 - -
82. HOXA5 ENSGALG00000025929 6231 1.574 - - - - - - - 0.739 - 0.835 homeobox A5 [Source:NCBI gene;Acc:100858404]
83. CCNI ENSGALG00000011457 3203 1.563 - - - 0.840 - - - - - 0.723 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
84. ARPP19 ENSGALG00000017370 1720 1.562 - - - 0.848 - - - 0.714 - - cAMP regulated phosphoprotein 19 [Source:NCBI gene;Acc:768853]
85. LARS ENSGALG00000007494 13966 1.56 - - - 0.796 - - - 0.764 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
86. HS2ST1 ENSGALG00000028423 4153 1.56 - - - 0.713 - - - - - 0.847 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
87. TMX4 ENSGALG00000028587 3513 1.556 - - - - - - - 0.732 - 0.824 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
88. C1H21ORF91 ENSGALG00000028290 5550 1.554 - - - - - - - 0.736 - 0.818 chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
89. SNW1 ENSGALG00000010501 17767 1.554 - - - 0.721 - - - - - 0.833 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
90. PRPF4B ENSGALG00000043751 8266 1.552 - - - - - - - 0.744 - 0.808 pre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346]
91. CHRAC1 ENSGALG00000040823 5695 1.551 - - - - - - - 0.730 - 0.821 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
92. TBPL1 ENSGALG00000013981 3710 1.55 - - - - - - - 0.726 - 0.824 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
93. WIPI2 ENSGALG00000004557 4961 1.546 - - - 0.819 - - - 0.727 - - WD repeat domain, phosphoinositide interacting 2 [Source:NCBI gene;Acc:416481]
94. RAB33B ENSGALG00000009790 2340 1.542 - - - 0.816 - - - 0.726 - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
95. RAB5C ENSGALG00000003359 5597 1.542 - - - - - - - 0.708 - 0.834 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
96. ATR ENSGALG00000002663 4626 1.54 - - - 0.758 - - - 0.782 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
97. TJP2 ENSGALG00000015109 4002 1.529 - - - 0.792 - - - 0.737 - - tight junction protein 2 [Source:NCBI gene;Acc:395751]
98. CNI CNI 18453 1.521 - - - - - - - 0.776 - 0.745
99. RPL22 ENSGALG00000000719 74238 1.521 - - - 0.705 - - - - - 0.816 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
100. DDX18 ENSGALG00000012147 12463 1.516 - - - - 0.811 - - - - 0.705 DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]

There are 1152 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA