Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SSPN

Gene Name Gene ID Reads Annotation
SSPN ENSGALG00000014042 638 sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]











Genes with expression patterns similar to SSPN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SSPN ENSGALG00000014042 638 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
2. HSPB8 ENSGALG00000007383 5333 2.26 - - 0.739 - - 0.731 - 0.790 - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
3. MIF4GD ENSGALG00000026715 41 1.598 - - - - - - - 0.855 - 0.743 MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
4. MYL3 ENSGALG00000005448 3379 1.562 - - 0.767 - - - 0.795 - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
5. CYP3A4 ENSGALG00000004436 75 1.56 - - - - - - 0.712 0.848 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
6. AFG3L2_1 ENSGALG00000013853 1319 1.549 - - - - - - - 0.747 - 0.802 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
7. ACTC1 ENSGALG00000009844 20914 1.467 0.703 - 0.764 - - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
8. IGF1R ENSGALG00000040651 772 0.999 - - - - 0.999 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
9. REST 2394 0.999 - - - - 0.999 - - - - - RE1 silencing transcription factor
10. XPO7 ENSGALG00000001838 1875 0.999 - - - - 0.999 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
11. CTSZ ENSGALG00000007462 630 0.999 - - - - 0.999 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
12. ELL2 ENSGALG00000014678 1111 0.999 - - - - 0.999 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
13. ENSGALG00000011687 ENSGALG00000011687 4553 0.999 - - - - 0.999 - - - - -
14. EAPP ENSGALG00000010007 5080 0.998 - - - - 0.998 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
15. DDX55 ENSGALG00000003298 2315 0.998 - - - - 0.998 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
16. DNAJC12 ENSGALG00000002769 1418 0.998 - - - - 0.998 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
17. ZBTB10 ENSGALG00000034376 3271 0.998 - - - - 0.998 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
18. TCP11L1 ENSGALG00000011688 2427 0.996 - - - - 0.996 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
19. TRAPPC12 ENSGALG00000016387 2593 0.995 - - - - 0.995 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
20. TLCD1 ENSGALG00000003973 17569 0.995 - - - - 0.995 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
21. KNOP1 ENSGALG00000002042 6251 0.995 - - - - 0.995 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
22. BAG4 ENSGALG00000003254 5751 0.995 - - - - 0.995 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
23. CZH9ORF41 CZH9ORF41 3492 0.994 - - - - 0.994 - - - - -
24. COIL ENSGALG00000003158 7806 0.994 - - - - 0.994 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
25. CBWD1 ENSGALG00000010147 2765 0.994 - - - - 0.994 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
26. MRPS27 ENSGALG00000015002 6541 0.994 - - - - 0.994 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
27. NAP1L1 ENSGALG00000010238 14506 0.993 - - - - 0.993 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
28. WDR82 ENSGALG00000025904 4783 0.993 - - - - 0.993 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
29. YY1 ENSGALG00000017388 1933 0.993 - - - - 0.993 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
30. ATG5 ENSGALG00000015387 7752 0.993 - - - - 0.993 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
31. SSR2 ENSGALG00000000764 32190 0.992 - - - - 0.992 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
32. COMMD8 ENSGALG00000026279 13509 0.992 - - - - 0.992 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
33. FERMT2 ENSGALG00000012425 5480 0.992 - - - - 0.992 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
34. RABEP1 ENSGALG00000001737 2650 0.992 - - - - 0.992 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
35. SIRT1 ENSGALG00000002761 9028 0.991 - - - - 0.991 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
36. FH ENSGALG00000013165 13669 0.99 - - - - 0.990 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
37. POLR3F ENSGALG00000008749 5645 0.99 - - - - 0.990 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
38. STK3 ENSGALG00000032850 6339 0.99 - - - - 0.990 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
39. MKI67 ENSGALG00000025996 28136 0.989 - - - - 0.989 - - - - - marker of proliferation Ki-67, transcript variant X3
40. CSNK1G1 ENSGALG00000030812 31618 0.989 - - - - 0.989 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
41. TLK2 ENSGALG00000000410 4690 0.989 - - - - 0.989 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
42. LATS2 4776 0.989 - - - - 0.989 - - - - - large tumor suppressor kinase 2
43. POLR2B ENSGALG00000011387 4864 0.989 - - - - 0.989 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
44. IGBP1 ENSGALG00000044628 9200 0.989 - - - - 0.989 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
45. TMEM165 ENSGALG00000027886 5468 0.988 - - - - 0.988 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
46. NFASC ENSGALG00000031776 4264 0.988 - - - - 0.988 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
47. SHROOM2 ENSGALG00000030802 4517 0.987 - - - - 0.987 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
48. FBXO9 ENSGALG00000016320 9600 0.986 - - - - 0.986 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
49. MRPL23 ENSGALG00000006561 13737 0.985 - - - - 0.985 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
50. MRPS25 ENSGALG00000008506 12131 0.985 - - - - 0.985 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
51. SH2D3C ENSGALG00000005036 5101 0.984 - - - - 0.984 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
52. CDC42SE2 ENSGALG00000027258 4725 0.984 - - - - 0.984 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
53. PLAA ENSGALG00000001782 5459 0.983 - - - - 0.983 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
54. AATF ENSGALG00000005420 6501 0.983 - - - - 0.983 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
55. REEP5 ENSGALG00000023157 6282 0.982 - - - - 0.982 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
56. PUM1 ENSGALG00000042598 9392 0.981 - - - - 0.981 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
57. TK2 ENSGALG00000034216 5394 0.981 - - - - 0.981 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
58. SAR1B ENSGALG00000038753 6493 0.98 - - - - 0.980 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
59. PSPC1 ENSGALG00000017142 13036 0.978 - - - - 0.978 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
60. ENSGALG00000014852 ENSGALG00000014852 15288 0.976 - - - - 0.976 - - - - -
61. DRAXIN ENSGALG00000004631 3122 0.974 - - - - 0.974 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
62. STRAP ENSGALG00000013092 13100 0.972 - - - - 0.972 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
63. GPN3 ENSGALG00000003807 6320 0.971 - - - - 0.971 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
64. SFSWAP ENSGALG00000002487 9977 0.969 - - - - 0.969 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
65. IGDCC4 ENSGALG00000007410 5457 0.969 - - - - 0.969 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
66. PCBP4 ENSGALG00000027695 7937 0.968 - - - - 0.968 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
67. NOP58 ENSGALG00000008454 34630 0.967 - - - - 0.967 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
68. EXO1 ENSGALG00000010748 7572 0.964 - - - - 0.964 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
69. RCAN3 ENSGALG00000004282 7778 0.964 - - - - 0.964 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
70. RANGAP1 ENSGALG00000011966 20170 0.962 - - - - 0.962 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
71. PTPN12 9302 0.96 - - - - 0.960 - - - - - protein tyrosine phosphatase, non-receptor type 12
72. KPNA3 ENSGALG00000017009 17330 0.96 - - - - 0.960 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
73. PTTG1 17936 0.959 - - - - 0.959 - - - - - pituitary tumor-transforming 1, transcript variant X1
74. RAB12 ENSGALG00000033608 14160 0.957 - - - - 0.957 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
75. GFPT1 ENSGALG00000036391 14025 0.956 - - - - 0.956 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
76. OGT ENSGALG00000005425 31074 0.955 - - - - 0.955 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
77. CCT4 ENSGALG00000008812 78267 0.953 - - - - 0.953 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
78. LARP1 ENSGALG00000040109 14808 0.951 - - - - 0.951 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
79. KERA ENSGALG00000011270 4204 0.95 - - - - 0.950 - - - - - keratocan [Source:NCBI gene;Acc:373995]
80. SKP2 ENSGALG00000003547 14637 0.95 - - - - 0.950 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
81. OLA1 ENSGALG00000009325 26414 0.948 - - - - 0.948 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
82. ADD3 ENSGALG00000008542 13814 0.946 - - - - 0.946 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
83. LY6E ENSGALG00000041621 16227 0.946 - - - - 0.946 - - - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
84. NAA25 ENSGALG00000041821 12729 0.943 - - - - 0.943 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
85. TBCA ENSGALG00000004353 18510 0.943 - - - - 0.943 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
86. RPL24 ENSGALG00000015339 227460 0.941 - - - - 0.941 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
87. PNRC2 ENSGALG00000004122 19228 0.941 - - - - 0.941 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
88. ATP2A2 ENSGALG00000032287 12734 0.937 - - - - 0.937 - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
89. EREG ENSGALG00000010864 46 0.93 - - - - - - - 0.930 - - epiregulin [Source:NCBI gene;Acc:408036]
90. METTL23 ENSGALG00000001790 7906 0.927 - - - - 0.927 - - - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
91. GBAS 18453 0.926 - - - - 0.926 - - - - - glioblastoma amplified sequence
92. CDC42 ENSGALG00000004796 59878 0.923 - - - - 0.923 - - - - - cell division cycle 42 [Source:NCBI gene;Acc:395917]
93. PSMC2 ENSGALG00000008236 25980 0.92 - - - - 0.920 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
94. ANXA2 ENSGALG00000003770 18252 0.914 - - - - 0.914 - - - - - annexin A2 [Source:NCBI gene;Acc:396297]
95. DHFR ENSGALG00000026757 18478 0.913 - - - - 0.913 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
96. COPS4 ENSGALG00000011130 21515 0.912 - - - - 0.912 - - - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
97. LRRC31 ENSGALG00000023616 55 0.911 - - - - - - 0.911 - - - leucine rich repeat containing 31 [Source:HGNC Symbol;Acc:HGNC:26261]
98. JSC JSC 7982 0.91 - - - - 0.910 - - - - -
99. C20H20ORF24 ENSGALG00000001054 22026 0.908 - - - - 0.908 - - - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
100. PAPOLA ENSGALG00000033099 20532 0.903 - - - - 0.903 - - - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]

There are 333 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA