Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SSH1

Gene Name Gene ID Reads Annotation
SSH1 ENSGALG00000004928 222 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]











Genes with expression patterns similar to SSH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SSH1 ENSGALG00000004928 222 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
2. CP ENSGALG00000030773 119 1.662 - - - - - - 0.713 - - 0.949 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
3. IL10R2 IL10R2 72 0.998 - - - - - - - - - 0.998
4. FAM190B FAM190B 165 0.998 - - - - - - - - - 0.998
5. CXADR ENSGALG00000015701 96 0.998 - - - - - - - - - 0.998 coxsackie virus and adenovirus receptor, transcript variant X2
6. 5S_2 5S_2 58 0.998 - - - - - - - - - 0.998
7. ZNF6 ZNF6 138 0.997 - - - - - - - - - 0.997
8. CPNE2 ENSGALG00000001316 236 0.997 - - - - - - - - - 0.997 copine 2 [Source:NCBI gene;Acc:415646]
9. ITSN2 ENSGALG00000016504 651 0.997 - - - - - - - - - 0.997 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
10. SOX6 ENSGALG00000006074 102 0.996 - - - - - - - - - 0.996 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
11. AURKA ENSGALG00000007768 793 0.996 - - - - - - - - - 0.996 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
12. APBA3 ENSGALG00000000740 1249 0.995 - - - - - - - - - 0.995 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
13. WDSUB1 ENSGALG00000012574 2038 0.994 - - - - - - - - - 0.994 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
14. PM20D2 ENSGALG00000015779 1301 0.994 - - - - - - - - - 0.994 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
15. PROM1 ENSGALG00000014496 2494 0.994 - - - - - - - - - 0.994 prominin 1 [Source:NCBI gene;Acc:422825]
16. ARHGAP21 ENSGALG00000007721 3961 0.994 - - - - - - - - - 0.994 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
17. BRD1 ENSGALG00000029379 6047 0.994 - - - - - - - - - 0.994 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
18. FAM129A ENSGALG00000004812 269 0.993 - - - - - - - - - 0.993 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
19. CRYM ENSGALG00000002484 3558 0.993 - - - - - - - - - 0.993 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
20. ITGA9 ENSGALG00000029378 415 0.993 - - - - - - - - - 0.993 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
21. FASTKD3 ENSGALG00000033521 1186 0.993 - - - - - - - - - 0.993 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
22. MTSS1 ENSGALG00000041969 1312 0.993 - - - - - - - - - 0.993 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
23. FSTL4 ENSGALG00000031487 529 0.993 - - - - - - - - - 0.993 follistatin like 4 [Source:NCBI gene;Acc:395163]
24. PCLO 249 0.993 - - - - - - - - - 0.993 piccolo presynaptic cytomatrix protein
25. CASKIN1 604 0.992 - - - - - - - - - 0.992 CASK interacting protein 1, transcript variant X4
26. NARS ENSGALG00000040506 9506 0.992 - - - - - - - - - 0.992 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
27. MSI1 ENSGALG00000007227 2279 0.992 - - - - - - - - - 0.992 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
28. C10orf118 C10orf118 762 0.991 - - - - - - - - - 0.991
29. PREX2 ENSGALG00000042354 134 0.991 - - - - - - - - - 0.991 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
30. DIAPH3 ENSGALG00000016937 1069 0.991 - - - - - - - - - 0.991 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
31. CNTRL ENSGALG00000001513 1773 0.99 - - - - - - - - - 0.990 centriolin [Source:NCBI gene;Acc:417121]
32. TP53BP1 ENSGALG00000042201 708 0.99 - - - - - - - - - 0.990 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
33. CDH1-A CDH1-A 343 0.99 - - - - - - - - - 0.990
34. C14orf80 C14orf80 1921 0.99 - - - - - - - - - 0.990
35. INTS10 ENSGALG00000010130 6320 0.989 - - - - - - - - - 0.989 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
36. MGA 1911 0.989 - - - - - - - - - 0.989 MGA, MAX dimerization protein, transcript variant X15
37. WHSC1 1712 0.989 - - - - - - - - - 0.989 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
38. HAUS8 ENSGALG00000003727 351 0.989 - - - - - - - - - 0.989 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
39. AGGF1 ENSGALG00000004311 3011 0.989 - - - - - - - - - 0.989 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
40. PLA2G15 ENSGALG00000041787 762 0.989 - - - - - - - - - 0.989 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
41. GRK4 ENSGALG00000015645 1065 0.988 - - - - - - - - - 0.988 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
42. SGSH ENSGALG00000007027 1115 0.988 - - - - - - - - - 0.988 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
43. PTX3 ENSGALG00000028284 2984 0.988 - - - - - - - - - 0.988 pentraxin 3 [Source:NCBI gene;Acc:548626]
44. FRMD3 ENSGALG00000012577 999 0.987 - - - - - - - - - 0.987 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
45. CPNE1 ENSGALG00000040856 610 0.987 - - - - - - - - - 0.987 copine 1 [Source:NCBI gene;Acc:419134]
46. RTN4R ENSGALG00000007732 1515 0.987 - - - - - - - - - 0.987 reticulon 4 receptor
47. SLC2A3 SLC2A3 527 0.987 - - - - - - - - - 0.987
48. SLC39A13 ENSGALG00000008122 2003 0.986 - - - - - - - - - 0.986 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
49. FBLIM1 ENSGALG00000003636 1498 0.985 - - - - - - - - - 0.985 filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
50. SSR2 ENSGALG00000000764 32190 0.985 - - - - - - - - - 0.985 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
51. ESRRG ENSGALG00000009645 2783 0.985 - - - - - - - - - 0.985 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
52. ASAP2 ENSGALG00000016419 1393 0.985 - - - - - - - - - 0.985 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
53. ASB3 ENSGALG00000008176 5422 0.984 - - - - - - - - - 0.984 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
54. TBC1D19 ENSGALG00000029673 1868 0.984 - - - - - - - - - 0.984 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
55. MPRIP ENSGALG00000004798 6700 0.984 - - - - - - - - - 0.984 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
56. TANGO2 ENSGALG00000002056 1971 0.983 - - - - - - - - - 0.983 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
57. MRPL50 ENSGALG00000015543 11649 0.983 - - - - - - - - - 0.983 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
58. PDPN ENSGALG00000030096 647 0.983 - - - - - - - - - 0.983 podoplanin, transcript variant X4
59. ACADL ENSGALG00000002891 8058 0.982 - - - - - - - - - 0.982 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
60. LRRN4 ENSGALG00000008815 481 0.982 - - - - - - - - - 0.982 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
61. HYAL3 ENSGALG00000029000 712 0.982 - - - - - - - - - 0.982 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
62. ENSGALG00000005389 ENSGALG00000005389 553 0.981 - - - - - - - - - 0.981
63. FREM3 ENSGALG00000020561 1824 0.981 - - - - - - - - - 0.981 FRAS1 related extracellular matrix 3
64. TMEM128 ENSGALG00000014992 6567 0.981 - - - - - - - - - 0.981 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
65. FBXO38 ENSGALG00000038627 2658 0.98 - - - - - - - - - 0.980 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
66. RWDD2B ENSGALG00000015807 3601 0.98 - - - - - - - - - 0.980 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
67. HOTAIRM1 HOTAIRM1 4335 0.98 - - - - - - - - - 0.980
68. CCT8 ENSGALG00000015821 12161 0.98 - - - - - - - - - 0.980 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
69. RHOT1 ENSGALG00000003397 5149 0.979 - - - - - - - - - 0.979 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
70. ZFR ENSGALG00000003235 8466 0.979 - - - - - - - - - 0.979 zinc finger RNA binding protein, transcript variant X3
71. SUV39H2 ENSGALG00000013920 4360 0.979 - - - - - - - - - 0.979 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
72. SLC35B1 ENSGALG00000035057 10683 0.979 - - - - - - - - - 0.979 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
73. ZNF106 ENSGALG00000009081 1520 0.979 - - - - - - - - - 0.979 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
74. CCDC51 ENSGALG00000006465 1845 0.978 - - - - - - - - - 0.978 coiled-coil domain containing 51, transcript variant X1
75. MPP5 ENSGALG00000009581 724 0.978 - - - - - - - - - 0.978 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
76. CCDC88A ENSGALG00000043587 2208 0.978 - - - - - - - - - 0.978 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
77. MYH1D ENSGALG00000027323 365 0.978 - - - - - - - - - 0.978 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
78. ERI2 1087 0.978 - - - - - - - - - 0.978 ERI1 exoribonuclease family member 2, transcript variant X1
79. C26H6ORF89 C26H6ORF89 1826 0.978 - - - - - - - - - 0.978
80. MB21D1 2460 0.978 - - - - - - - - - 0.978 Mab-21 domain containing 1
81. CPT2 ENSGALG00000010681 3211 0.977 - - - - - - - - - 0.977 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
82. LAMP2 ENSGALG00000008572 198 0.977 - - - - - - - - - 0.977 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
83. C1orf198 ENSGALG00000026600 5651 0.977 - - - - - - - - - 0.977 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
84. PIK3CG ENSGALG00000008081 5 0.977 - - - - - - - 0.977 - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
85. ENSGALG00000016136 ENSGALG00000016136 33 0.977 - - - - - - - 0.977 - -
86. SPDL1 ENSGALG00000001942 4403 0.977 - - - - - - - - - 0.977 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
87. UQCR11 ENSGALG00000001096 25245 0.977 - - - - - - - - - 0.977 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
88. SLCO4C1 ENSGALG00000026768 30 0.977 - - - - - - - 0.977 - - solute carrier organic anion transporter family member 4C1, transcript variant X4
89. FBXO21 ENSGALG00000008201 2608 0.976 - - - - - - - - - 0.976 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
90. ARPC1B ENSGALG00000032588 2407 0.975 - - - - - - - - - 0.975 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
91. DCAF5 ENSGALG00000009463 1297 0.975 - - - - - - - - - 0.975 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
92. KLHL7 ENSGALG00000010938 528 0.974 - - - - - - - - - 0.974 kelch like family member 7 [Source:NCBI gene;Acc:420612]
93. TMEM130 ENSGALG00000003569 949 0.972 - - - - - - - - - 0.972 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
94. IDS ENSGALG00000009154 1177 0.972 - - - - - - - - - 0.972 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
95. TXNDC11 ENSGALG00000003154 2224 0.972 - - - - - - - - - 0.972 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
96. RNF219 ENSGALG00000016911 4458 0.971 - - - - - - - - - 0.971 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
97. GXYLT1 ENSGALG00000009532 5682 0.971 - - - - - - - - - 0.971 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
98. CETN1 ENSGALG00000026741 7243 0.971 - - - - - - - - - 0.971 centrin 1 [Source:NCBI gene;Acc:422668]
99. HABP4 ENSGALG00000012628 2894 0.971 - - - - - - - - - 0.971 hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
100. TMEM237 ENSGALG00000008381 1317 0.97 - - - - - - - - - 0.970 transmembrane protein 237 [Source:NCBI gene;Acc:424084]

There are 456 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA