Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SSBP4

Gene Name Gene ID Reads Annotation
SSBP4 ENSDARG00000056483 5156 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]










Genes with expression patterns similar to SSBP4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SSBP4 ENSDARG00000056483 5156 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
2. sulf2l sulf2l 4980 3.326 - - 0.827 0.983 0.754 - 0.762 - -
3. hmgb1b ENSDARG00000030479 10398 3.239 - - 0.758 - - 0.754 0.892 - 0.835 high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
4. FGFBP3 FGFBP3 993 3.228 - - 0.802 - - 0.723 0.830 0.873 -
5. rbb4 rbb4 15541 3.188 - - 0.723 0.871 - 0.811 0.783 - -
6. AGO1 ENSDARG00000092644 4521 3.07 0.728 - 0.744 - - 0.748 0.850 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
7. mta2 ENSDARG00000013031 2932 3.027 - 0.709 0.749 - 0.707 - 0.862 - - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
8. gnao1a ENSDARG00000016676 8184 2.632 - - 0.777 0.968 - - 0.887 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
9. pax6a ENSDARG00000103379 3061 2.526 - - - 0.969 - 0.719 0.838 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
10. nr2f6b ENSDARG00000003165 5855 2.515 - 0.771 - - - - 0.835 0.909 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
11. ANKRD11 ENSDARG00000051886 10024 2.512 - - 0.802 0.883 - - 0.827 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
12. sept5a ENSDARG00000013843 1206 2.481 0.717 - - 0.983 - - 0.781 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
13. ubr5 ENSDARG00000018192 9267 2.443 - 0.812 0.799 - - - 0.832 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
14. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.44 - - 0.859 - - 0.730 0.851 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
15. si:ch211-288g17.3 ENSDARG00000070959 2425 2.434 - - 0.907 - - - 0.813 0.714 - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
16. tuba1b ENSDARG00000045367 8485 2.433 - 0.737 - - 0.702 - - - 0.994 tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
17. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.432 - - 0.838 - - 0.732 0.862 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
18. tmpob ENSDARG00000022978 8121 2.413 - - 0.826 - - 0.744 0.843 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
19. npas3b npas3b 1446 2.395 - - 0.853 - - 0.723 0.819 - -
20. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 2.387 - - 0.722 - - - 0.718 0.947 - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
21. hnrnpub ENSDARG00000004735 16496 2.363 0.736 - - - - 0.728 0.899 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
22. hdac8 ENSDARG00000003021, ENSDARG00000105159 1729 2.358 0.701 - - - - - 0.783 0.874 - histone deacetylase 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2772]
23. EPB41L1 EPB41L1 1896 2.344 0.766 - - - - 0.750 0.828 - -
24. epb41a ENSDARG00000099283 860 2.338 - - 0.785 - - 0.742 0.811 - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
25. epha4b ENSDARG00000011600 3110 2.336 0.723 - - - - 0.774 0.839 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
26. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.33 - 0.752 - - - 0.732 0.846 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
27. elavl4 ENSDARG00000045639 998 2.321 - - 0.784 - - 0.719 0.818 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
28. tgif1 ENSDARG00000059337 4020 2.314 - - 0.752 - - 0.738 0.824 - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
29. snrpd3l ENSDARG00000076283 7655 2.309 - - - - - 0.725 0.803 0.781 - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
30. cspg5a ENSDARG00000069981 1699 2.302 - - 0.733 - - 0.713 0.856 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
31. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 2.297 0.719 - - - - 0.791 0.787 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
32. gipc1 ENSDARG00000104483 2913 2.275 - - 0.808 - 0.712 - 0.755 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
33. dnmt3ab ENSDARG00000015566 1206 2.269 0.706 - - - - 0.727 0.836 - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
34. smarcd1 ENSDARG00000019004 6028 2.268 - - - - 0.736 0.705 0.827 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
35. sall1a ENSDARG00000074319, ENSDARG00000111696 1486 2.25 0.719 - 0.731 - - - 0.800 - - spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]
36. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.241 - - 0.762 - 0.712 - 0.767 - - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
37. ctnnd2b ENSDARG00000003779 964 2.229 0.700 - - - - 0.703 0.826 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
38. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 2.225 - 0.711 - - - 0.736 0.778 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
39. dync1i1 ENSDARG00000060948 554 2.219 - - 0.709 - - 0.769 0.741 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
40. gdf11 ENSDARG00000044924 534 2.2 - - 0.727 - - 0.721 0.752 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
41. rufy3 ENSDARG00000029692 3031 2.185 - - - - - 0.739 0.742 0.704 - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
42. sdc3 3788 2.172 0.716 - 0.750 - - - 0.706 - - syndecan 3
43. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.164 0.751 - 0.702 - - - 0.711 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
44. ube2a ENSDARG00000098466 12765 1.95 - - - - - - - 0.962 0.988 ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
45. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.873 - - - 0.967 - - - 0.906 - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
46. CABZ01070258.1 ENSDARG00000105687 3643 1.839 - - - 0.977 - - 0.862 - -
47. si:ch211-11k18.4 ENSDARG00000087869 3298 1.833 - - - 0.980 - - - 0.853 - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
48. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.831 - - - - - - 0.840 - 0.991 chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
49. smarce1 ENSDARG00000016871 9628 1.828 - - - - - - 0.848 - 0.980 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
50. lrrtm1 ENSDARG00000052713 1041 1.815 - - - 0.980 - - 0.835 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
51. efnb3b ENSDARG00000042277 5823 1.814 - - - 0.942 - - - 0.872 - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
52. chga ENSDARG00000008829 1086 1.802 - - - 0.975 - - 0.827 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
53. ENDOD1_5 ENDOD1_5 8723 1.788 - - - - - 0.800 - - 0.988
54. zmiz1a ENSDARG00000074502 3920 1.787 - - - - - - 0.791 - 0.996 zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
55. rdh12 ENSDARG00000018069 396 1.787 - - - - - - 0.841 0.946 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
56. nmt1a ENSDARG00000052966 5918 1.786 - - - 0.967 - - - 0.819 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
57. yy1b ENSDARG00000027978 2669 1.767 0.815 - - - - - - 0.952 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
58. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.763 - - 0.782 0.981 - - - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
59. st8sia2 ENSDARG00000018788 2183 1.758 - - - - - - 0.808 0.950 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
60. WNK2 ENSDARG00000104989 429 1.757 - - - 0.977 - - 0.780 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
61. nptx1l ENSDARG00000074671 569 1.756 - - - - - - 0.814 0.942 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
62. hcfc1b ENSDARG00000012519 3633 1.748 - - 0.770 - - - - 0.978 - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
63. tox4 tox4 1671 1.747 - - - 0.981 - - 0.766 - -
64. ZFHX3 ENSDARG00000103057 7759 1.746 - - 0.821 - - - 0.925 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
65. otpa ENSDARG00000014201 2290 1.745 - - - 0.983 - - 0.762 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
66. rab14 ENSDARG00000074246 4084 1.743 - - - - - - 0.748 - 0.995 RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
67. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.737 - 0.760 - 0.977 - - - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
68. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.735 - - - - - - 0.839 0.896 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
69. fzr1 fzr1 2984 1.733 - 0.757 - 0.976 - - - - -
70. acy3.2 ENSDARG00000005525 6441 1.733 - - - 0.954 - - - 0.779 - aspartoacylase (aminocyclase) 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040718-37]
71. cplx2 ENSDARG00000061918, ENSDARG00000111920 3673 1.732 - - - - - - 0.815 0.917 - complexin 2 [Source:ZFIN;Acc:ZDB-GENE-081113-1]
72. brd7 ENSDARG00000008380 3654 1.731 - - - 0.988 - - 0.743 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
73. rbbp6 ENSDARG00000037919 4813 1.731 - - 0.764 0.967 - - - - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
74. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.725 - - 0.773 0.952 - - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
75. parn ENSDARG00000102634 2049 1.725 - 0.749 - 0.976 - - - - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
76. hmgb3a ENSDARG00000056725 15668 1.72 - - - 0.825 - - 0.895 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
77. pknox1.1 ENSDARG00000018765 2149 1.719 - - - 0.929 - - 0.790 - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
78. rhag ENSDARG00000019253 2974 1.712 - 0.723 - - - - - - 0.989 Rh associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8229]
79. PAPD5 2090 1.712 - 0.739 - 0.973 - - - - - PAP associated domain containing 5, transcript variant X1
80. sf3a3 ENSDARG00000100114 4511 1.71 - - - - - - 0.732 - 0.978 splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
81. RNF145 RNF145 1364 1.709 - - - - - - 0.760 0.949 -
82. pebp1 ENSDARG00000042069 6651 1.702 - 0.739 - - - - - 0.963 - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
83. KDM6B KDM6B 10265 1.697 - - - 0.969 - - 0.728 - -
84. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.693 - - - - - - 0.768 0.925 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
85. emc3 ENSDARG00000020607 3406 1.693 - - - 0.988 - 0.705 - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
86. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.693 - - 0.755 - - - 0.938 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
87. gatad2ab ENSDARG00000006192 2461 1.69 - - 0.759 - - - - 0.931 - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
88. gstp1 ENSDARG00000104068 12698 1.689 - - - - - - - 0.733 0.956 glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
89. ncalda ENSDARG00000070688 5069 1.689 - - - 0.974 - - 0.715 - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
90. kansl1a ENSDARG00000090895 2593 1.688 - - 0.745 - - - - 0.943 - KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
91. pa2g4b ENSDARG00000070657 7999 1.685 - 0.752 - 0.933 - - - - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
92. tmem198a ENSDARG00000042115 1694 1.684 - - 0.842 - - - 0.842 - - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
93. cpsf5 cpsf5 1841 1.683 - - - 0.979 - - 0.704 - -
94. mxd3 ENSDARG00000098350 3040 1.681 - - - 0.976 - - 0.705 - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
95. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.679 - - 0.848 - - - 0.831 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
96. gins1 ENSDARG00000007624 1421 1.677 - 0.725 - - - - - 0.952 - GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
97. COL13A1 1565 1.676 - 0.736 - - - - - 0.940 - collagen, type XIII, alpha 1, transcript variant X1
98. calm1a ENSDARG00000021811 4791 1.675 - - - - - - 0.877 0.798 - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
99. srsf11 ENSDARG00000098574 12801 1.674 - - - 0.928 - - - 0.746 - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
100. lepre1 lepre1 5346 1.672 - 0.780 - - - - - 0.892 -

There are 1956 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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