Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SS2

Gene Name Gene ID Reads Annotation
SS2 ENSGALG00000003034 277 somatostatin II [Source:NCBI gene;Acc:395106]











Genes with expression patterns similar to SS2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SS2 ENSGALG00000003034 277 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 somatostatin II [Source:NCBI gene;Acc:395106]
2. RAB37 ENSGALG00000027789 17 1.719 - - - - - - 1.000 0.719 - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
3. OCSTAMP ENSGALG00000044719 10 1.718 - - - - - - 1.000 0.718 - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
4. MYL1 ENSGALG00000002907 1300 1.541 - - 0.789 - - 0.752 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
5. BAFF BAFF 40 1.52 - - 0.741 - - 0.779 - - - -
6. COL9A2 ENSGALG00000027526 4685 1.513 - - 0.719 - - 0.794 - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
7. APOPT1 ENSGALG00000044519 193 1 - - - - - - 1.000 - - - apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20492]
8. SMAD9 ENSGALG00000017050 11 1 - - - - - - 1.000 - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
9. CRLF1 ENSGALG00000026146 1 1 - - - - - - 1.000 - - - cytokine receptor like factor 1 [Source:HGNC Symbol;Acc:HGNC:2364]
10. TNFRSF6B ENSGALG00000006106 12 1 - - - - - - 1.000 - - - TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
11. LVRN ENSGALG00000002318 14 1 - - - - - - 1.000 - - - laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
12. BTBD6 ENSGALG00000033813 163 1 - - - - - - 1.000 - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
13. ENSGALG00000025765 ENSGALG00000025765 1 1 - - - - - - 1.000 - - -
14. CACNA1C ENSGALG00000013022 322 1 - - - - - - 1.000 - - - calcium voltage-gated channel subunit alpha1 C [Source:HGNC Symbol;Acc:HGNC:1390]
15. NTN1 ENSGALG00000023626 12 1 - - - - - - 1.000 - - - netrin 1 [Source:NCBI gene;Acc:396389]
16. SLCO1B1 ENSGALG00000019276 7 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
17. NR4A3 ENSGALG00000013568 1 1 - - - - - - 1.000 - - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
18. MCOLN3 ENSGALG00000008709 21 1 - - - - - - 1.000 - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
19. MED12 ENSGALG00000036322 814 1 - - - - - - 1.000 - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
20. ENSGALG00000011799 ENSGALG00000011799 37 1 - - - - - - 1.000 - - -
21. CDKL5 ENSGALG00000016529 26 1 - - - - - - 1.000 - - - cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
22. C1S ENSGALG00000014603 80 1 - - - - - - 1.000 - - - complement C1s [Source:NCBI gene;Acc:418294]
23. FBXO43 ENSGALG00000038940 7 1 - - - - - - 1.000 - - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
24. AOX1 ENSGALG00000008185 14 1 - - - - - - 1.000 - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
25. DPYS ENSGALG00000039011 54 1 - - - - - - 1.000 - - - dihydropyrimidinase [Source:NCBI gene;Acc:420266]
26. TBC1D20 ENSGALG00000006201 6 1 - - - - - - 1.000 - - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
27. LRCH3 ENSGALG00000007595 21 1 - - - - - - 1.000 - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
28. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - - 1.000 - - -
29. FYCO1 ENSGALG00000040212 75 1 - - - - - - 1.000 - - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
30. DMGDH ENSGALG00000004491 15 1 - - - - - - 1.000 - - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
31. CLRN1 ENSGALG00000010384 7 1 - - - - - - 1.000 - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
32. CAPN9 158 1 - - - - - - 1.000 - - - calpain 9
33. PIRT 41 1 - - - - - - 1.000 - - - phosphoinositide-interacting regulator of transient receptor potential channels
34. LRRC58 ENSGALG00000033186 15 1 - - - - - - 1.000 - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
35. IRF-4 IRF-4 19 1 - - - - - - 1.000 - - -
36. ZDHHC16 ENSGALG00000007592 19 1 - - - - - - 1.000 - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
37. CA13 ENSGALG00000033428 1 1 - - - - - - 1.000 - - - carbonic anhydrase 13 [Source:HGNC Symbol;Acc:HGNC:14914]
38. CFI ENSGALG00000012126 20 1 - - - - - - 1.000 - - - complement factor I [Source:NCBI gene;Acc:428773]
39. RAB11FIP1 41 1 - - - - - - 1.000 - - - RAB11 family interacting protein 1, transcript variant X2
40. ZNF469 ENSGALG00000026534 8 1 - - - - - - 1.000 - - - zinc finger protein 469, transcript variant X3
41. KLHL30 ENSGALG00000006260 32 1 - - - - - - 1.000 - - - kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
42. MYO19 9 1 - - - - - - 1.000 - - - myosin XIX, transcript variant X5
43. RBM15 ENSGALG00000000401 22 1 - - - - - - 1.000 - - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
44. SLC12A5 ENSGALG00000042199 1 1 - - - - - - 1.000 - - - solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]
45. SLC6A6 ENSGALG00000006425 31 1 - - - - - - 1.000 - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
46. SNORD103 SNORD103 25 1 - - - - - - 1.000 - - -
47. C12orf50 ENSGALG00000045093 9 0.985 - - - - - - - 0.985 - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
48. C9orf96 C9orf96 43 0.983 - - - - - - - 0.983 - -
49. TSPAN10 ENSGALG00000004525 6 0.971 - - - - - - - 0.971 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
50. NRG3 ENSGALG00000042812 10 0.97 - - - - - - - 0.970 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
51. FRMPD3 ENSGALG00000028975 3 0.97 - - - - - - - 0.970 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
52. DENND2A ENSGALG00000012857 350 0.97 - - - - - - - 0.970 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
53. PGF ENSGALG00000026557 33 0.97 - - - - - - - 0.970 - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
54. ENSGALG00000014888 ENSGALG00000014888 3 0.967 - - - - - - - 0.967 - -
55. ADPRH ENSGALG00000015473 7 0.967 - - - - - - - 0.967 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
56. RUNX1 ENSGALG00000016022 2 0.967 - - - - - - - 0.967 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
57. TTC29 ENSGALG00000010009 4 0.967 - - - - - - - 0.967 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
58. GUCY1B3 29 0.967 - - - - - - - 0.967 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
59. POMGNT1 ENSGALG00000010351 3 0.967 - - - - - - - 0.967 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
60. PACRG ENSGALG00000011560 67 0.967 - - - - - - - 0.967 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
61. ENSGALG00000027203 ENSGALG00000027203 2 0.967 - - - - - - - 0.967 - -
62. BDKRB2 ENSGALG00000011080 12 0.963 - - - - - - - 0.963 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
63. CCNA1 ENSGALG00000017052 23 0.959 - - - - - - - 0.959 - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
64. EXOC6 ENSGALG00000006763 119 0.954 - - - - - - - 0.954 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
65. ZFYVE20 ZFYVE20 132 0.954 - - - - - - - 0.954 - -
66. WDR19 ENSGALG00000014064 49 0.95 - - - - - - - 0.950 - - WD repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:18340]
67. ENSGALG00000019793 ENSGALG00000019793 198 0.945 - - - - - - - 0.945 - -
68. SERGEF ENSGALG00000006231 35 0.941 - - - - - - - 0.941 - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
69. ENSGALG00000008594 ENSGALG00000008594 54 0.94 - - - - - - - 0.940 - -
70. TTC25 ENSGALG00000003464 70 0.937 - - - - - - - 0.937 - - tetratricopeptide repeat domain 25
71. IGFBP2 ENSGALG00000011469 26 0.937 - - - - - - - 0.937 - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
72. SCUBE3 ENSGALG00000002675 12 0.937 - - - - - - - 0.937 - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
73. BAI1 BAI1 235 0.937 - - - - - - - 0.937 - -
74. UBAP1 ENSGALG00000021378 11 0.934 - - - - - - - 0.934 - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
75. PTPRR ENSGALG00000010148 93 0.931 - - - - - - - 0.931 - - protein tyrosine phosphatase, receptor type R, transcript variant X4
76. NRROS 72 0.925 - - - - - - - 0.925 - - negative regulator of reactive oxygen species, transcript variant X2
77. ENSGALG00000000193 ENSGALG00000000193 19 0.893 - - - - - - - 0.893 - -
78. P2RY12 ENSGALG00000036470 20 0.886 - - - - - - - 0.886 - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
79. GRIA2 ENSGALG00000009405 275 0.885 - - - - - - - 0.885 - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
80. DNAH9 ENSGALG00000001111 28 0.873 - - - - - - - 0.873 - - dynein axonemal heavy chain 9
81. KIF5C ENSGALG00000012462 167 0.857 - - - - - - - 0.857 - - kinesin family member 5C [Source:NCBI gene;Acc:408046]
82. TEAD1 ENSGALG00000005415 194 0.843 - - - - - - - 0.843 - - TEA domain transcription factor 1 [Source:NCBI gene;Acc:403089]
83. LOC428714 ENSGALG00000007530 41 0.841 - - - - - - - 0.841 - - LOC428714, transcript variant X2
84. MCU ENSGALG00000004355 420 0.841 - - - - - - - 0.841 - - mitochondrial calcium uniporter [Source:HGNC Symbol;Acc:HGNC:23526]
85. EPHX1 ENSGALG00000009291 46 0.84 - - - - - - - 0.840 - - epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]
86. TCP11 ENSGALG00000002692 11 0.836 - - - - - - - 0.836 - - t-complex 11, transcript variant X3
87. TSC2 ENSGALG00000005646 489 0.836 - - - - - - - 0.836 - - TSC complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:12363]
88. FN3K ENSGALG00000001531 208 0.833 - - - - - - - 0.833 - - fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
89. C10ORF57 C10ORF57 249 0.83 - - - - - - - 0.830 - -
90. SLC4A10 ENSGALG00000030032 56 0.828 - - - - - - - 0.828 - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
91. LRRK2 ENSGALG00000007161 66 0.828 - - - - - - - 0.828 - - leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
92. SLC15A5 ENSGALG00000013097 213 0.823 - - - - - 0.823 - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
93. GRB10 ENSGALG00000013100 37 0.821 - - - - - - - 0.821 - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
94. ENSGALG00000011906 ENSGALG00000011906 181 0.819 - - - - - - - 0.819 - -
95. CELA3B ENSGALG00000027189 32 0.817 - - - - - - - 0.817 - - chymotrypsin like elastase family member 3B
96. ABCG2 ENSGALG00000030677 88 0.817 - - - - - - - 0.817 - - Gallus gallus ATP binding cassette subfamily G member 2 (Junior blood group) (ABCG2), mRNA. [Source:RefSeq mRNA;Acc:NM_001328490]
97. TNC ENSGALG00000039990 3758 0.817 - - - - - - - 0.817 - - tenascin C [Source:NCBI gene;Acc:396440]
98. LEFTY2 ENSGALG00000009256 1 0.812 - - - - - 0.812 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
99. PTH3R PTH3R 214 0.812 - - - - - 0.812 - - - -
100. WIF1 ENSGALG00000039209 863 0.812 - - - - - 0.812 - - - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]

There are 150 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA