Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SS18L1

Gene Name Gene ID Reads Annotation
SS18L1 ENSGALG00000005145 14 SS18L1, nBAF chromatin remodeling complex subunit [Source:HGNC Symbol;Acc:HGNC:15592]











Genes with expression patterns similar to SS18L1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SS18L1 ENSGALG00000005145 14 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SS18L1, nBAF chromatin remodeling complex subunit [Source:HGNC Symbol;Acc:HGNC:15592]
2. TMEM213 ENSGALG00000026974 3 1.828 - - - - 0.972 - - - - 0.856 transmembrane protein 213 [Source:HGNC Symbol;Acc:HGNC:27220]
3. MREG ENSGALG00000003758 3 1.806 - - - - - 0.806 - - - 1.000 melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
4. ENSGALG00000020283 ENSGALG00000020283 10 1.713 - - 1.000 - - - - 0.713 - -
5. UCP3 ENSGALG00000017316 30 1.652 - - - - 0.846 0.806 - - - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
6. NSL1/DC31 NSL1/DC31 43 1.415 - - - 0.711 - - - 0.704 - -
7. PACSIN1 ENSGALG00000002802 6 1 - - - - - - - - - 1.000 protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
8. TECTA ENSGALG00000040857 1 1 - - 1.000 - - - - - - - tectorin alpha [Source:NCBI gene;Acc:395686]
9. B2M ENSGALG00000002160 4 1 - - - - - - - - - 1.000 beta-2-microglobulin [Source:NCBI gene;Acc:414830]
10. C8orf37 ENSGALG00000038971 5 1 - - - - - - - - - 1.000 chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
11. GATA4 ENSGALG00000016662 6 1 - - - - - - - - - 1.000 GATA binding protein 4 [Source:NCBI gene;Acc:396392]
12. PPAP2C PPAP2C 1 1 - - - - - - - - - 1.000
13. ENSGALG00000023702 ENSGALG00000023702 2 1 - - - - - - - - - 1.000
14. MLNR ENSGALG00000017003 10 1 - - - - - - - - - 1.000 motilin receptor [Source:NCBI gene;Acc:428072]
15. OVCH2 ENSGALG00000005318 8 1 - - 1.000 - - - - - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
16. ENSGALG00000026003 ENSGALG00000026003 1 1 - - 1.000 - - - - - - -
17. RALYL ENSGALG00000036938 1 1 - - 1.000 - - - - - - - RALY RNA binding protein like [Source:NCBI gene;Acc:420203]
18. MMP11 ENSGALG00000005968 3 1 - - 1.000 - - - - - - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
19. CCDC85C 2 1 - - - - - - - - - 1.000 coiled-coil domain containing 85C, transcript variant X1
20. EVA1CL ENSGALG00000004734 168 1 - - - - - - - - - 1.000 protein eva-1 homolog C-like, transcript variant X2
21. TMEM156 ENSGALG00000024490 9 1 - - - - - - - - - 1.000 transmembrane protein 156, transcript variant X5
22. CDYL2 ENSGALG00000012978 6 1 - - - - - - - - - 1.000 chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
23. PGP ENSGALG00000005888 1 1 - - - - - - - - - 1.000 phosphoglycolate phosphatase [Source:NCBI gene;Acc:416559]
24. DAGLA ENSGALG00000036492 3 1 - - 1.000 - - - - - - - diacylglycerol lipase alpha [Source:HGNC Symbol;Acc:HGNC:1165]
25. ARHGEF5 ENSGALG00000017276 32 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
26. DCAKD ENSGALG00000000870 4 1 - - 1.000 - - - - - - - dephospho-CoA kinase domain containing [Source:HGNC Symbol;Acc:HGNC:26238]
27. ZNF606L ENSGALG00000024335 4 1 - - - - - - - - - 1.000 zinc finger protein 606-like, transcript variant X9
28. TINAGL1 ENSGALG00000017715 3 1 - - - - - - - - - 1.000 tubulointerstitial nephritis antigen like 1 [Source:HGNC Symbol;Acc:HGNC:19168]
29. SYT9 ENSGALG00000005265 34 1 - - 1.000 - - - - - - - synaptotagmin 9 [Source:HGNC Symbol;Acc:HGNC:19265]
30. TAT ENSGALG00000000893 11 1 - - - - - - - - - 1.000 tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
31. ENSGALG00000013912 ENSGALG00000013912 3 1 - - - - - - - - - 1.000
32. RHBDF2 ENSGALG00000001943 1 1 - - - - - - - - - 1.000 rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
33. LECT2 ENSGALG00000006323 60 1 - - - - - - - - - 1.000 leukocyte cell derived chemotaxin 2 [Source:NCBI gene;Acc:396471]
34. C21H1orf158 C21H1orf158 1 1 - - 1.000 - - - - - - -
35. KDM1B ENSGALG00000012685 11 1 - - - - - - - - - 1.000 lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]
36. MSANTD1 ENSGALG00000015628 154 1 - - 1.000 - - - - - - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
37. SESN2 ENSGALG00000005648, ENSGALG00000037603 0 1 - - - - - - - - - 1.000 sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
38. HPDL ENSGALG00000023348 1 1 - - 1.000 - - - - - - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
39. CREB3L1 ENSGALG00000008393 3 1 - - - - - - - - - 1.000 cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
40. FAM46C 13 1 - - 1.000 - - - - - - - family with sequence similarity 46 member C
41. BEST1 ENSGALG00000007217 1 1 - - 1.000 - - - - - - - bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703]
42. LOC100858797 ENSGALG00000027167 7 1 - - 1.000 - - - - - - - feather keratin 1-like, transcript variant X1
43. CSMD3 ENSGALG00000031578 23 1 - - 1.000 - - - - - - - CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
44. FMNL2 ENSGALG00000012525 78 1 - - - - 1.000 - - - - - formin like 2 [Source:HGNC Symbol;Acc:HGNC:18267]
45. C3orf52 C3orf52 1 1 - - 1.000 - - - - - - -
46. CLVS1 ENSGALG00000043172 56 1 - - - - - - 1.000 - - - clavesin 1
47. LOXL4 ENSGALG00000013090 9 1 - - - - - - - - - 1.000 lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
48. PLEKHM3 ENSGALG00000008479 3 1 - - 1.000 - - - - - - - pleckstrin homology domain containing M3 [Source:HGNC Symbol;Acc:HGNC:34006]
49. TSPAN8 ENSGALG00000010152 2666 1 - - 1.000 - - - - - - - tetraspanin 8 [Source:NCBI gene;Acc:417854]
50. DGKI ENSGALG00000012890 3 1 - - 1.000 - - - - - - - diacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]
51. TEX2L ENSGALG00000005421 52 1 - - 1.000 - - - - - - - testis expressed 2-like, transcript variant X1
52. IL12RB2 ENSGALG00000011222 2 1 - - 1.000 - - - - - - - interleukin 12 receptor subunit beta 2 [Source:NCBI gene;Acc:424705]
53. NOG ENSGALG00000003114 12 1 - - 1.000 - - - - - - - noggin [Source:NCBI gene;Acc:373912]
54. LOC427545 ENSGALG00000004428 3 1 - - - - - - - - - 1.000 histamine H3 receptor-like
55. CCDC122 ENSGALG00000016968 5 1 - - - - - - - - - 1.000 coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
56. TLL2 ENSGALG00000005519 10 1 - - - - - - - - - 1.000 tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
57. TNNI3K ENSGALG00000011353 10 1 - - - - - - - - - 1.000 TNNI3 interacting kinase [Source:NCBI gene;Acc:100533999]
58. ENSGALG00000012217 ENSGALG00000012217 8 1 - - - - - - - - - 1.000
59. gga-mir-6699 ENSGALG00000027236 1 1 - - 1.000 - - - - - - - gga-mir-6699 [Source:miRBase;Acc:MI0022521]
60. RUNDC3A ENSGALG00000026518 2 1 - - - - - - - - - 1.000 RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
61. SLC44A3 ENSGALG00000005610 18 1 - - - - - - - - - 1.000 solute carrier family 44 member 3 [Source:HGNC Symbol;Acc:HGNC:28689]
62. ANKRD29 ENSGALG00000015034 1 1 - - 1.000 - - - - - - - ankyrin repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:27110]
63. ZDHHC1 ENSGALG00000002091 3 1 - - - - - - - - - 1.000 zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
64. PDCL2 ENSGALG00000013783 9 1 - - 1.000 - - - - - - - phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
65. BFGF BFGF 1 1 - - 1.000 - - - - - - -
66. ANKRD42 8 1 - - - - - - - - - 1.000 ankyrin repeat domain 42
67. TECPR1 ENSGALG00000003507 20 1 - - 1.000 - - - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
68. B3GALT1 ENSGALG00000010931 6 1 - - 1.000 - - - - - - - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
69. WFDC2 ENSGALG00000031164 37 1 - - - - - - - - - 1.000 WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
70. ERGIC3 ENSGALG00000027834 0 1 - - - - - - - - - 1.000 ERGIC and golgi 3 [Source:HGNC Symbol;Acc:HGNC:15927]
71. LYSMD4 ENSGALG00000007092 1 1 - - 1.000 - - - - - - - LysM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:26571]
72. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - - - 1.000 solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
73. CXorf21 ENSGALG00000016286 4 1 - - - - - - - - - 1.000 chromosome X open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:25667]
74. RMDN2 ENSGALG00000010554 16 1 - - 1.000 - - - - - - - regulator of microtubule dynamics 2, transcript variant X1
75. GAL11 GAL11 0 1 - - - - - - - - - 1.000
76. PROC ENSGALG00000001780 26 1 - - 1.000 - - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
77. KLF11 ENSGALG00000016440 65 1 - - 1.000 - - - - - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
78. C21orf62 ENSGALG00000040059 5 1 - - - - - - - - - 1.000 chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
79. AVD ENSGALG00000023622 22 1 - - - - - - - - - 1.000 avidin [Source:NCBI gene;Acc:396260]
80. FTCD ENSGALG00000006131 0 1 - - - - - - - - - 1.000 formimidoyltransferase cyclodeaminase [Source:NCBI gene;Acc:395726]
81. NANOG ENSGALG00000027772 89 1 - - 1.000 - - - - - - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
82. MAML2 ENSGALG00000017199 13 0.972 - - - - 0.972 - - - - - mastermind like transcriptional coactivator 2 [Source:HGNC Symbol;Acc:HGNC:16259]
83. OTX2 ENSGALG00000034889 8 0.972 - - - - 0.972 - - - - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
84. ZBTB44 ENSGALG00000001341 3 0.972 - - - - 0.972 - - - - - zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
85. LOC422308 ENSGALG00000007546 7 0.972 - - - - 0.972 - - - - - exocyst complex component 1-like
86. SMYD3 ENSGALG00000010653 14 0.972 - - - - 0.972 - - - - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
87. DUSP13L ENSGALG00000005007 3 0.972 - - - - 0.972 - - - - - dual specificity protein phosphatase 13 isoform MDSP-like
88. RHOC ENSGALG00000001569 53 0.972 - - - - 0.972 - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
89. ENSGALG00000005026 ENSGALG00000005026 9 0.972 - - - - 0.972 - - - - -
90. TSKU ENSGALG00000000761 10 0.972 - - - - 0.972 - - - - - tsukushi, small leucine rich proteoglycan [Source:NCBI gene;Acc:419088]
91. GNPTG ENSGALG00000006441 50 0.972 - - - - 0.972 - - - - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
92. ATXN3 ENSGALG00000010766 48 0.972 - - - - 0.972 - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
93. PSD ENSGALG00000042551 6 0.972 - - - - 0.972 - - - - - pleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:HGNC:9507]
94. DIRAS2 ENSGALG00000005323 11 0.972 - - - - 0.972 - - - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
95. TMEM154 ENSGALG00000023355 19 0.964 - - - - 0.964 - - - - - transmembrane protein 154 [Source:HGNC Symbol;Acc:HGNC:26489]
96. F13A1 ENSGALG00000012802 16 0.962 - - - - - - - 0.962 - - coagulation factor XIII A chain [Source:NCBI gene;Acc:395420]
97. NUMBL ENSGALG00000016508 12 0.96 - - - - - 0.960 - - - - numb homolog (Drosophila)-like, transcript variant X2
98. MBD5 ENSGALG00000012449 27 0.959 - - - - - - - 0.959 - - methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
99. TMEM132D ENSGALG00000002671 12 0.958 - - - - - - - 0.958 - - transmembrane protein 132D, transcript variant X6
100. CCL1 ENSGALG00000002329 2 0.958 - - - - - - - 0.958 - - C-C motif chemokine ligand 1 [Source:NCBI gene;Acc:395552]

There are 226 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA