Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SRSF7

Gene Name Gene ID Reads Annotation
SRSF7 ENSGALG00000033120 43444 serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]











Genes with expression patterns similar to SRSF7

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRSF7 ENSGALG00000033120 43444 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
2. NDUFS4 ENSGALG00000028026 25876 1.651 - - - - 0.800 - 0.851 - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
3. BIRC5 ENSGALG00000008713 46856 1.511 - - - - 0.750 - - - 0.761 - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
4. NOL9 ENSGALG00000028958 23978 0.984 - - - - - - 0.984 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
5. NAA15 ENSGALG00000009782 18563 0.982 - - - - - - 0.982 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
6. BTG1 ENSGALG00000011276 17496 0.981 - - - - - - 0.981 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
7. PPP1R8 ENSGALG00000000729 11797 0.976 - - - - - - 0.976 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
8. GFPT1 ENSGALG00000036391 14025 0.974 - - - - - - 0.974 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
9. SSR1 ENSGALG00000012798 62626 0.974 - - - - - - 0.974 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
10. MTF2 ENSGALG00000043087 15225 0.973 - - - - - - 0.973 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
11. LPHN2 LPHN2 16507 0.973 - - - - - - 0.973 - - -
12. TMEM9B ENSGALG00000005908 14074 0.971 - - - - - - 0.971 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
13. PKM ENSGALG00000001992 93960 0.969 - - - - - - 0.969 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
14. PCNA ENSGALG00000029292 19163 0.969 - - - - - - 0.969 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
15. EIF5B ENSGALG00000016764 30681 0.967 - - - - - - 0.967 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
16. BID ENSGALG00000013039 12427 0.967 - - - - - - 0.967 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
17. STT3B ENSGALG00000011465 11939 0.966 - - - - - - 0.966 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
18. GAS41 GAS41 9941 0.966 - - - - - - 0.966 - - -
19. SF3A1 ENSGALG00000007937 11716 0.964 - - - - - - 0.964 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
20. ACTG1 ENSGALG00000001381 63905 0.964 - - - - - - 0.964 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
21. NSF ENSGALG00000001055 7399 0.964 - - - - - - 0.964 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
22. FKBP9 ENSGALG00000037669 12079 0.963 - - - - - - 0.963 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
23. WDR33 ENSGALG00000002043 6340 0.963 - - - - - - 0.963 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
24. SAMM50 ENSGALG00000014194 20437 0.962 - - - - - - 0.962 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
25. CASC4 ENSGALG00000008208 8338 0.962 - - - - - - 0.962 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
26. FAM206A ENSGALG00000019524 7170 0.961 - - - - - - 0.961 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
27. USP34 ENSGALG00000004455 6667 0.961 - - - - - - 0.961 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
28. PPP1CB ENSGALG00000010026 6909 0.961 - - - - - - 0.961 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
29. SH2D3C ENSGALG00000005036 5101 0.96 - - - - - - 0.960 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
30. TLE4 TLE4 7278 0.96 - - - - - - 0.960 - - -
31. CCDC47 ENSGALG00000000564 6584 0.96 - - - - - - 0.960 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
32. LARS ENSGALG00000007494 13966 0.959 - - - - - - 0.959 - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
33. FANCC ENSGALG00000012618 7002 0.958 - - - - - - 0.958 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
34. POGZ ENSGALG00000036365 4056 0.957 - - - - - - 0.957 - - - pogo transposable element with ZNF domain, transcript variant X2
35. ZCCHC17 ENSGALG00000000618 5163 0.956 - - - - - - 0.956 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
36. VPS41 ENSGALG00000031635 4391 0.956 - - - - - - 0.956 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
37. OLFML3 ENSGALG00000001956 28633 0.956 - - - - - - 0.956 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
38. SLC9A3R2 ENSGALG00000005608 4220 0.955 - - - - - - 0.955 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
39. TRIM37 ENSGALG00000005084 4036 0.954 - - - - - - 0.954 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
40. HOXB3 ENSGALG00000043219 5198 0.954 - - - - - - 0.954 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
41. GTF2I ENSGALG00000021665 6812 0.953 - - - - - - 0.953 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
42. RARRES2 ENSGALG00000042642 3043 0.953 - - - - - - 0.953 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
43. C-MET C-MET 1650 0.952 - - - - - - 0.952 - - -
44. GNB2L1 ENSGALG00000000122 194871 0.951 - - - - - - 0.951 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
45. FAAH ENSGALG00000010433 3309 0.951 - - - - - - 0.951 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
46. STK3 ENSGALG00000032850 6339 0.939 - - - - - - 0.939 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
47. SYNCRIP ENSGALG00000015830 30555 0.933 - - - - - - 0.933 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
48. POLR2E ENSGALG00000002591 26405 0.858 - - - - 0.858 - - - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
49. EEF1D 153795 0.857 - - - - - - 0.857 - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
50. EIF5A2 ENSGALG00000009309 143671 0.853 - - - - - - 0.853 - - - eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
51. HP1BP3 ENSGALG00000010079 33723 0.848 - - - - 0.848 - - - - - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
52. TBL1X ENSGALG00000040006 28597 0.839 - - - - 0.839 - - - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
53. MRPS26 ENSGALG00000014118 27422 0.837 - - - - 0.837 - - - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
54. ELOVL5 ENSGALG00000016314 18163 0.834 - - - - 0.834 - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
55. RRM2 ENSGALG00000016442 40375 0.833 - - - - 0.833 - - - - - ribonucleotide reductase regulatory subunit M2
56. UBE2D3 ENSGALG00000012311 39831 0.832 - - - - 0.832 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
57. SFSWAP ENSGALG00000002487 9977 0.829 - - - - - - 0.829 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
58. GSPT1 15580 0.827 - - - - 0.827 - - - - - G1 to S phase transition 1, transcript variant X1
59. CALM CALM 85776 0.822 - - - - 0.822 - - - - -
60. G3BP1 ENSGALG00000004160 36795 0.82 - - - - 0.820 - - - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
61. RPS2 ENSGALG00000005490 293634 0.819 - - - - 0.819 - - - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
62. KPNA2 ENSGALG00000003584 76058 0.818 - - - - 0.818 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
63. HDLBP ENSGALG00000005823 24636 0.817 - - - - 0.817 - - - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
64. KIF2A ENSGALG00000014737 16391 0.814 - - - - 0.814 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
65. Mar-05 Mar-05 6330 0.813 - - - - 0.813 - - - - -
66. ZC3H6 ENSGALG00000008269 10353 0.813 - - - - 0.813 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
67. UMPS ENSGALG00000011770 11331 0.813 - - - - 0.813 - - - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
68. GABARAPL2 ENSGALG00000003208 9195 0.813 - - - - 0.813 - - - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
69. PRCC ENSGALG00000040696 9346 0.812 - - - - 0.812 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
70. SPEN ENSGALG00000036932 9688 0.808 - - - - 0.808 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
71. CSNK2A1 ENSGALG00000006197 41409 0.805 - - - - 0.805 - - - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
72. MRPL21 ENSGALG00000004362 20796 0.803 - - - - 0.803 - - - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
73. STK4 ENSGALG00000004098 11366 0.801 - - - - 0.801 - - - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
74. EIF3A ENSGALG00000009328 39982 0.799 - - - - 0.799 - - - - - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
75. PSME3 ENSGALG00000002937 41148 0.798 - - - - 0.798 - - - - - proteasome activator subunit 3 [Source:NCBI gene;Acc:420017]
76. PSMA1 ENSGALG00000006022 26724 0.796 - - - - 0.796 - - - - - proteasome subunit alpha 1 [Source:NCBI gene;Acc:395874]
77. ZDHHC6 ENSGALG00000008870 16575 0.796 - - - - 0.796 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
78. SELT SELT 25524 0.796 - - - - 0.796 - - - - -
79. RPL22 ENSGALG00000000719 74238 0.796 - - - - 0.796 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
80. UQCRH ENSGALG00000017380 55734 0.796 - - - - 0.796 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
81. DDOST ENSGALG00000010073 18707 0.795 - - - - 0.795 - - - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
82. SEPHS1 ENSGALG00000014575 10701 0.795 - - - - 0.795 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
83. PSMD3 ENSGALG00000033162 25615 0.795 - - - - 0.795 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
84. PSMC1 ENSGALG00000010675 20633 0.792 - - - - 0.792 - - - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
85. RPS8 ENSGALG00000010124 363516 0.789 - - - - - - 0.789 - - - ribosomal protein S8 [Source:NCBI gene;Acc:424584]
86. NARS ENSGALG00000040506 9506 0.789 - - - - 0.789 - - - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
87. HDAC8 ENSGALG00000004825 12066 0.789 - - - - 0.789 - - - - - histone deacetylase 8, transcript variant X2
88. NEK6 ENSGALG00000001118 20333 0.787 - - - - 0.787 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
89. COMMD2 ENSGALG00000028001 18981 0.787 - - - - 0.787 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
90. ATP5MC1 ENSGALG00000001330 37766 0.786 - - - - 0.786 - - - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
91. DENR ENSGALG00000003795 30805 0.786 - - - - 0.786 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
92. EIF3B ENSGALG00000040999 49971 0.785 - - - - 0.785 - - - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
93. ACTG1_1 ENSGALG00000001381 64662 0.783 - - - - 0.783 - - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
94. MINOS1 ENSGALG00000004039 37740 0.783 - - - - 0.783 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
95. RNF4 ENSGALG00000015668 15780 0.782 - - - - 0.782 - - - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
96. SRGAP1 ENSGALG00000009825 6753 0.782 - - - - 0.782 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
97. TOP2B ENSGALG00000011300 25048 0.781 - - - - 0.781 - - - - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
98. NUP88 ENSGALG00000032280 9847 0.78 - - - - 0.780 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
99. CDCA7 ENSGALG00000040833 7484 0.779 - - - - 0.779 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
100. CDCA3 ENSGALG00000014513 17047 0.779 - - - - 0.779 - - - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]

There are 109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA