Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRSF5

Gene Name Gene ID Reads Annotation
SRSF5 ENSGALG00000009421 8502 serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]











Genes with expression patterns similar to SRSF5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRSF5 ENSGALG00000009421 8502 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
2. NUMB ENSGALG00000009300 4220 1.625 - - - - - - 0.845 0.780 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
3. CPOX ENSGALG00000015240 5292 1.598 - - - - - - 0.803 0.795 - - coproporphyrinogen oxidase
4. FAM207A ENSGALG00000007513 8748 1.585 - - - - - - 0.815 0.770 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
5. PSMD10 ENSGALG00000008287 11380 1.572 - - - - - - 0.753 0.819 - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
6. RIT1 ENSGALG00000014647 7174 1.563 - - - - - - 0.778 0.785 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
7. TMEM39B ENSGALG00000003287 4125 1.532 - - - - - - 0.743 0.789 - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
8. E2F7 ENSGALG00000031340 3430 1.529 - - - - - - 0.758 0.771 - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
9. RPE ENSGALG00000002847 7644 1.528 - - - - - - 0.779 0.749 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
10. TLK1 ENSGALG00000009569 5446 1.518 - - - - - - 0.744 0.774 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
11. HISTH1 ENSGALG00000011747 16825 1.509 - - - - - - 0.744 0.765 - - histone H1
12. RNF219 ENSGALG00000016911 4458 1.503 - - - - - - 0.719 0.784 - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
13. SDF2L1 ENSGALG00000031982 6084 1.502 - - - - - - 0.744 0.758 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
14. PARN ENSGALG00000003091 6363 1.501 - - - - - - 0.796 0.705 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
15. TRAPPC4 ENSGALG00000007707 3568 1.5 - - - - - - 0.735 0.765 - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
16. CNI CNI 18453 1.493 - - - - - - 0.763 0.730 - -
17. QTRTD1 QTRTD1 10765 1.484 - - - - - - 0.725 0.759 - -
18. NIPA2 ENSGALG00000016737 3792 1.479 - - - - - - 0.741 0.738 - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
19. PEX10 ENSGALG00000001223 5704 1.477 - - - - - - 0.749 0.728 - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
20. Sep-09 Sep-09 4723 1.477 - - - - - - 0.745 0.732 - -
21. FLCN ENSGALG00000004816 4101 1.476 - - - - - - 0.717 0.759 - - folliculin, transcript variant X1
22. PCDHGC3 ENSGALG00000028565 18583 1.473 - - - - - - 0.755 0.718 - - Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001245037]
23. MPRIP ENSGALG00000004798 6700 1.448 - - - - - - 0.705 0.743 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
24. ZCCHC2 ENSGALG00000012889 3163 1.439 - - - - - - 0.707 0.732 - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
25. SNRPC ENSGALG00000002773 21965 1.42 - - - - - - 0.704 0.716 - - small nuclear ribonucleoprotein polypeptide C [Source:NCBI gene;Acc:419901]
26. NDUFS5 ENSGALG00000003625 27698 0.897 - - - - - - - 0.897 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
27. SUV39H2 ENSGALG00000013920 4360 0.897 - - - - - - 0.897 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
28. C1GALT1 ENSGALG00000009752 7148 0.856 - - - - - - - 0.856 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
29. SMU1 ENSGALG00000002014 8136 0.839 - - - - - - 0.839 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
30. LEPROT ENSGALG00000011047 7132 0.839 - - - - - - 0.839 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
31. RPL7L1 ENSGALG00000011974 20292 0.838 - - - - - - 0.838 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
32. TM4SF18 4553 0.838 - - - - - - - 0.838 - - transmembrane 4 L six family member 18, transcript variant X2
33. MFAP1 ENSGALG00000028295 6043 0.838 - - - - - - - 0.838 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
34. SRSF6 ENSGALG00000000990 12424 0.837 - - - - - - 0.837 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
35. SBNO1 ENSGALG00000003392 6731 0.836 - - - - - - 0.836 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
36. EIF5B ENSGALG00000016764 30681 0.835 - - - - - - - 0.835 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
37. MOSPD1 ENSGALG00000006132 8503 0.832 - - - - - - 0.832 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
38. RANBP9 ENSGALG00000012696 4871 0.83 - - - - - - - 0.830 - - RAN binding protein 9 [Source:HGNC Symbol;Acc:HGNC:13727]
39. CAP1 ENSGALG00000036294 18598 0.83 - - - - - - 0.830 - - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
40. VPS35 ENSGALG00000004375 8059 0.828 - - - - - - 0.828 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
41. ANLN 10479 0.828 - - - - - - - 0.828 - - anillin actin binding protein, transcript variant X2
42. MRPS18A ENSGALG00000010296 11039 0.825 - - - - - - 0.825 - - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
43. TRIP12 ENSGALG00000002929 11713 0.825 - - - - - - 0.825 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
44. UBE2G2 ENSGALG00000005667 12689 0.823 - - - - - - 0.823 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
45. UTP18 ENSGALG00000002985 7129 0.822 - - - - - - - 0.822 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
46. CDC20 ENSGALG00000009971 11197 0.822 - - - - - - 0.822 - - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
47. TBL3 ENSGALG00000005558 8363 0.821 - - - - - - - 0.821 - - transducin beta like 3 [Source:NCBI gene;Acc:416545]
48. ARPC1A ENSGALG00000004693 11583 0.821 - - - - - - 0.821 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
49. SEC62 ENSGALG00000009379 15745 0.821 - - - - - - - 0.821 - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
50. GABPB1 ENSGALG00000023440 5676 0.82 - - - - - - - 0.820 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
51. CSK ENSGALG00000031270 11541 0.82 - - - - - - 0.820 - - - C-terminal Src kinase [Source:NCBI gene;Acc:396396]
52. PDHA1 ENSGALG00000016430 7070 0.82 - - - - - - 0.820 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
53. PRKACB ENSGALG00000028530 12506 0.82 - - - - - - - 0.820 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
54. CNOT11 ENSGALG00000039563 11251 0.819 - - - - - - - 0.819 - - CCR4-NOT transcription complex subunit 11
55. DNTTIP2 4528 0.819 - - - - - - - 0.819 - - deoxynucleotidyltransferase, terminal, interacting protein 2, transcript variant X3
56. TSTD1 TSTD1 3613 0.818 - - - - - - - 0.818 - -
57. NUP85 ENSGALG00000007974 21249 0.817 - - - - - - - 0.817 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
58. SF3B3 ENSGALG00000002531 19397 0.817 - - - - - - - 0.817 - - splicing factor 3b subunit 3, transcript variant X2
59. SAT1 ENSGALG00000016348 8469 0.817 - - - - - - - 0.817 - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
60. ERO1LB ERO1LB 2910 0.816 - - - - - - - 0.816 - -
61. GLI2 ENSGALG00000011630 3347 0.816 - - - - - - - 0.816 - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
62. SH3BGRL ENSGALG00000007128 18708 0.815 - - - - - - - 0.815 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
63. MKRN1 ENSGALG00000012852 6907 0.815 - - - - - - - 0.815 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
64. GLRX5 ENSGALG00000011079 28943 0.814 - - - - - - 0.814 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
65. SIAH1 ENSGALG00000003916 6682 0.813 - - - - - - - 0.813 - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
66. EMC7 ENSGALG00000009637 4969 0.813 - - - - - - 0.813 - - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
67. NUP214 ENSGALG00000041111 4902 0.81 - - - - - - - 0.810 - - nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
68. TOMM20 ENSGALG00000035299 23431 0.809 - - - - - - 0.809 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
69. ZFR ENSGALG00000003235 8466 0.809 - - - - - - 0.809 - - - zinc finger RNA binding protein, transcript variant X3
70. CPSF6 ENSGALG00000019355 7634 0.809 - - - - - - 0.809 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
71. DDX42 ENSGALG00000000581 8780 0.808 - - - - - - - 0.808 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
72. TPD52L2 ENSGALG00000004683 13624 0.808 - - - - - - 0.808 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
73. MAEA ENSGALG00000013310 13230 0.807 - - - - - - - 0.807 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
74. HMGB3 ENSGALG00000009071 12011 0.806 - - - - - - - 0.806 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
75. DTYMK ENSGALG00000006305 11736 0.804 - - - - - - 0.804 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
76. NUBPL ENSGALG00000009983 3328 0.803 - - - - - - - 0.803 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
77. PCF11 ENSGALG00000017249 4714 0.803 - - - - - - - 0.803 - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
78. CCNG2 ENSGALG00000010347 9122 0.803 - - - - - - - 0.803 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
79. GFM1 ENSGALG00000009634 7213 0.801 - - - - - - - 0.801 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
80. DAD1 ENSGALG00000035626 32604 0.801 - - - - - - - 0.801 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
81. ANAPC16 ENSGALG00000004410 18001 0.801 - - - - - - - 0.801 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
82. TMBIM1 ENSGALG00000011436 7399 0.8 - - - - - - - 0.800 - - transmembrane BAX inhibitor motif containing 1 [Source:HGNC Symbol;Acc:HGNC:23410]
83. R3HDM1 ENSGALG00000012246 6580 0.799 - - - - - - - 0.799 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
84. VTA1 ENSGALG00000013810 4998 0.799 - - - - - - - 0.799 - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
85. CPSF2 ENSGALG00000010783 5236 0.799 - - - - - - 0.799 - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
86. LMAN1 ENSGALG00000034821 12788 0.798 - - - - - - 0.798 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
87. C4orf27 C4orf27 16724 0.798 - - - - - - - 0.798 - -
88. SRRM1 ENSGALG00000001283 23820 0.798 - - - - - - 0.798 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
89. SEC22B ENSGALG00000039704 16080 0.797 - - - - - - 0.797 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
90. NFYB ENSGALG00000041193 6158 0.797 - - - - - - - 0.797 - - nuclear transcription factor Y subunit beta [Source:NCBI gene;Acc:396205]
91. PSMD13 ENSGALG00000043684 14720 0.797 - - - - - - - 0.797 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
92. HOMER3_1 ENSGALG00000003058, ENSGALG00000003074 1364 0.796 - - - - - - - 0.796 - - homer scaffolding protein 3, transcript variant X4
93. MYEOV2 MYEOV2 5155 0.795 - - - - - - - 0.795 - -
94. EMC3 ENSGALG00000003738 10363 0.793 - - - - - - - 0.793 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
95. CCNH ENSGALG00000015641 8051 0.793 - - - - - - - 0.793 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
96. ARPC4 ENSGALG00000006691 33311 0.793 - - - - - - - 0.793 - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
97. PPP2R5A ENSGALG00000009828 10309 0.793 - - - - - - 0.793 - - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
98. CHDZ CHDZ 10381 0.792 - - - - - - - 0.792 - -
99. FN3KRP ENSGALG00000028979 4160 0.792 - - - - - - - 0.792 - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
100. LPAR1 ENSGALG00000015729 3874 0.791 - - - - - - 0.791 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]

There are 401 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA