Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRSF4

Gene Name Gene ID Reads Annotation
SRSF4 1200 serine and arginine rich splicing factor 4, transcript variant X2











Genes with expression patterns similar to SRSF4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRSF4 1200 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine and arginine rich splicing factor 4, transcript variant X2
2. GKAP1 ENSGALG00000012586 2908 1.737 - - 0.818 - 0.919 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
3. VRTN ENSGALG00000010232 692 1.675 - - 0.813 - 0.862 - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
4. NAT9 ENSGALG00000007723 2098 1.651 - - 0.726 - 0.925 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
5. gga-mir-1306 ENSGALG00000025271 1231 1.618 - - - - 0.855 - - - - 0.763 gga-mir-1306 [Source:miRBase;Acc:MI0007057]
6. RUFY2 1442 1.617 - - 0.817 - 0.800 - - - - - RUN and FYVE domain containing 2, transcript variant X1
7. SGOL1 SGOL1 3919 1.562 - - 0.805 - 0.757 - - - - -
8. PCP4 ENSGALG00000022819 880 1.53 - - 0.828 - - - 0.702 - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
9. AARSD1 ENSGALG00000002880 3068 1.516 - - 0.728 - 0.788 - - - - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
10. IVD ENSGALG00000040267 5820 1.487 - - 0.742 - - - - - 0.745 - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
11. FAM178A FAM178A 2738 1.468 - - 0.723 - 0.745 - - - - -
12. CLN8 ENSGALG00000039606 4209 1.453 - - 0.730 - - - - - 0.723 - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
13. STON2 ENSGALG00000010579 76 0.982 - - - - 0.982 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
14. PAQR8 ENSGALG00000016675 85 0.98 - - - - 0.980 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
15. CECR1 336 0.979 - - - - 0.979 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
16. CCDC6 ENSGALG00000003165 93 0.979 - - - - 0.979 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
17. ASTE1 ENSGALG00000036171 155 0.975 - - - - 0.975 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
18. MOCS3 ENSGALG00000007986 308 0.972 - - - - 0.972 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
19. CSPP1 1756 0.971 - - - - 0.971 - - - - - centrosome and spindle pole associated protein 1
20. CLIC3 ENSGALG00000038789 233 0.969 - - - - 0.969 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
21. FAM171B ENSGALG00000002646 837 0.968 - - - - 0.968 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
22. KCNC4 ENSGALG00000000400 129 0.968 - - - - 0.968 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
23. DUS2 856 0.965 - - - - 0.965 - - - - - dihydrouridine synthase 2, transcript variant X2
24. BBX ENSGALG00000015353 1281 0.961 - - - - 0.961 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
25. CANT1 ENSGALG00000011822 2218 0.958 - - - - 0.958 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
26. SPSB3 ENSGALG00000002285 1329 0.957 - - - - 0.957 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
27. PPTC7 ENSGALG00000004550 154 0.957 - - - - 0.957 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
28. CMTM3 ENSGALG00000000424 393 0.953 - - - - 0.953 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
29. TAC1 ENSGALG00000009737 2211 0.949 - - - - 0.949 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
30. GGA.10540 GGA.10540 3324 0.947 - - - - 0.947 - - - - -
31. GLT8D1 ENSGALG00000001642 4232 0.947 - - - - 0.947 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
32. KCNB1 ENSGALG00000004758 620 0.945 - - - - 0.945 - - - - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
33. ENSGALG00000022967 ENSGALG00000022967 240 0.944 - - - - 0.944 - - - - -
34. CADM3 ENSGALG00000036925 1753 0.942 - - - - 0.942 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
35. ADAMTS9 ENSGALG00000041750 1291 0.941 - - 0.941 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 9 [Source:HGNC Symbol;Acc:HGNC:13202]
36. CAMLG ENSGALG00000006411 662 0.94 - - - - 0.940 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
37. ABCD2 ENSGALG00000042554 1607 0.94 - - - - 0.940 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
38. TEF ENSGALG00000011958 375 0.939 - - - - 0.939 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
39. ENSGALG00000001346 ENSGALG00000001346 233 0.938 - - - - 0.938 - - - - -
40. DPP7 ENSGALG00000038145 4888 0.937 - - - - 0.937 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
41. B3GAT2 ENSGALG00000031590 615 0.935 - - - - 0.935 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
42. GPR158 ENSGALG00000007667 111 0.935 - - - - 0.935 - - - - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
43. CCDC102A ENSGALG00000029999 324 0.933 - - - - 0.933 - - - - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
44. TFAP2B ENSGALG00000016680 829 0.933 - - 0.933 - - - - - - - transcription factor AP-2 beta [Source:NCBI gene;Acc:395713]
45. PLEKHB1 ENSGALG00000017321 443 0.933 - - - - 0.933 - - - - - pleckstrin homology domain containing B1 [Source:NCBI gene;Acc:419064]
46. FAM183A 242 0.93 - - - - 0.930 - - - - - family with sequence similarity 183 member A, transcript variant 2
47. SCAF4 ENSGALG00000033965 2027 0.929 - - - - 0.929 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
48. ENSGALG00000006865 ENSGALG00000006865 307 0.929 - - - - 0.929 - - - - -
49. KIAA1407 KIAA1407 252 0.929 - - - - 0.929 - - - - -
50. PRMT10 PRMT10 1169 0.926 - - - - 0.926 - - - - -
51. ENSGALG00000020497 ENSGALG00000020497 446 0.924 - - - - 0.924 - - - - -
52. OFD1 ENSGALG00000016576 1916 0.922 - - - - 0.922 - - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
53. CCDC88A ENSGALG00000043587 2208 0.921 - - - - 0.921 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
54. SCARB2 ENSGALG00000011499 2763 0.92 - - - - 0.920 - - - - - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
55. PLEK2 ENSGALG00000009562 706 0.92 - - - - 0.920 - - - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
56. LRRC6 ENSGALG00000042548 227 0.919 - - - - 0.919 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
57. MYO9B ENSGALG00000003717 746 0.918 - - 0.918 - - - - - - - myosin IXB [Source:NCBI gene;Acc:420135]
58. PPM1M ENSGALG00000033277 556 0.917 - - - - 0.917 - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1M [Source:NCBI gene;Acc:415941]
59. SNRNP35 ENSGALG00000003318 1253 0.917 - - - - 0.917 - - - - - small nuclear ribonucleoprotein U11/U12 subunit 35 [Source:NCBI gene;Acc:416823]
60. CNN2 ENSGALG00000027777 512 0.914 - - - - 0.914 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
61. NEK3 ENSGALG00000017024 696 0.911 - - - - 0.911 - - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
62. BMP2 ENSGALG00000029301 379 0.91 - - 0.910 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
63. APTX ENSGALG00000001954 692 0.91 - - - - 0.910 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
64. RIOK3 ENSGALG00000015004 4249 0.909 - - - - 0.909 - - - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
65. MED7 ENSGALG00000003870 4244 0.908 - - - - 0.908 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
66. LARS2 ENSGALG00000036309 2624 0.908 - - 0.908 - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17095]
67. AVL9 ENSGALG00000041568 1558 0.906 - - - - 0.906 - - - - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
68. MYO18A ENSGALG00000003741 1023 0.906 - - 0.906 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
69. KIFC3 ENSGALG00000043034 802 0.904 - - - - 0.904 - - - - - kinesin family member C3 [Source:HGNC Symbol;Acc:HGNC:6326]
70. FDX1 ENSGALG00000026507 2573 0.903 - - - - 0.903 - - - - - ferredoxin 1 [Source:NCBI gene;Acc:373947]
71. NMB ENSGALG00000043506 1387 0.902 - - - - 0.902 - - - - - neuromedin B [Source:NCBI gene;Acc:415333]
72. ENSGALG00000001591 ENSGALG00000001591 784 0.901 - - - - 0.901 - - - - -
73. ATG10 ENSGALG00000027714 1100 0.9 - - 0.900 - - - - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
74. TSN ENSGALG00000011652 905 0.9 - - 0.900 - - - - - - - translin [Source:NCBI gene;Acc:395955]
75. CDC16 ENSGALG00000016816 2162 0.897 - - - - 0.897 - - - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
76. C11H19ORF12 C11H19ORF12 5149 0.897 - - - - 0.897 - - - - -
77. C1orf50 ENSGALG00000004800 4894 0.896 - - - - 0.896 - - - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
78. RPA3 ENSGALG00000010700 6212 0.895 - - - - 0.895 - - - - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
79. INPP5E ENSGALG00000001964 3580 0.894 - - - - 0.894 - - - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
80. CEP44 ENSGALG00000020201 1060 0.893 - - - - 0.893 - - - - - centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
81. ACP6 ENSGALG00000015485 3147 0.893 - - - - 0.893 - - - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
82. GALNT16 ENSGALG00000009452 675 0.893 - - - - 0.893 - - - - - polypeptide N-acetylgalactosaminyltransferase 16 [Source:HGNC Symbol;Acc:HGNC:23233]
83. BCCIP ENSGALG00000006617 13291 0.892 - - 0.892 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
84. EPB41 ENSGALG00000001329 787 0.891 - - 0.891 - - - - - - - erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
85. KIAA0930 ENSGALG00000014226 1243 0.891 - - 0.891 - - - - - - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
86. U2SURP ENSGALG00000002612 4255 0.89 - - - - 0.890 - - - - - U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
87. TRPC6 ENSGALG00000029416 281 0.89 - - - - 0.890 - - - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
88. PPWD1 ENSGALG00000014756 1118 0.89 - - - - 0.890 - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:28954]
89. C26H6ORF89 C26H6ORF89 1826 0.888 - - - - 0.888 - - - - -
90. ENSGALG00000028772 ENSGALG00000028772 1636 0.888 - - - - 0.888 - - - - -
91. RNF126 ENSGALG00000042948 4724 0.887 - - - - 0.887 - - - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
92. PIGN ENSGALG00000012903 853 0.885 - - - - 0.885 - - - - - phosphatidylinositol glycan anchor biosynthesis class N [Source:HGNC Symbol;Acc:HGNC:8967]
93. RNF4 ENSGALG00000015668 15780 0.883 - - 0.883 - - - - - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
94. PDIA5 ENSGALG00000011689 6913 0.882 - - - - 0.882 - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
95. HDAC4 ENSGALG00000004288 2124 0.881 - - - - 0.881 - - - - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
96. AASDHPPT ENSGALG00000027981 1017 0.878 - - - - 0.878 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
97. APMAP ENSGALG00000008651 2167 0.877 - - - - 0.877 - - - - - adipocyte plasma membrane associated protein [Source:NCBI gene;Acc:416715]
98. ENSGALG00000028359 ENSGALG00000028359 479 0.877 - - 0.877 - - - - - - -
99. PIH1D3 ENSGALG00000004870 1365 0.877 - - 0.877 - - - - - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
100. ZNF385D ENSGALG00000011283 2578 0.876 - - - - 0.876 - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]

There are 452 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA