Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRSF3

Gene Name Gene ID Reads Annotation
SRSF3 ENSGALG00000000533 51281 serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]











Genes with expression patterns similar to SRSF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRSF3 ENSGALG00000000533 51281 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
2. ACTG1 ENSGALG00000001381 63905 1.492 - - 0.729 - 0.763 - - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
3. CLNS1A ENSGALG00000008574 25675 1.464 - - 0.748 - - - - 0.716 - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
4. NUP188 ENSGALG00000043394 9288 0.962 - - - - - - - 0.962 - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
5. OLA1 ENSGALG00000009325 26414 0.937 - - - - 0.937 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
6. HNRNPA0 ENSGALG00000006160 54117 0.934 - - - - - - 0.934 - - - heterogeneous nuclear ribonucleoprotein A0 [Source:HGNC Symbol;Acc:HGNC:5030]
7. CTNNB1 ENSGALG00000037203 56399 0.932 - - - - - - 0.932 - - - catenin beta 1 [Source:NCBI gene;Acc:395964]
8. TBCA ENSGALG00000004353 18510 0.922 - - - - 0.922 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
9. PNRC2 ENSGALG00000004122 19228 0.921 - - - - 0.921 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
10. DHFR ENSGALG00000026757 18478 0.918 - - - - 0.918 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
11. SKP2 ENSGALG00000003547 14637 0.916 - - - - 0.916 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
12. DYNLRB1 ENSGALG00000034509 28361 0.915 - - - - 0.915 - - - - - dynein light chain roadblock-type 1
13. KPNA3 ENSGALG00000017009 17330 0.913 - - - - 0.913 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
14. OGT ENSGALG00000005425 31074 0.913 - - - - 0.913 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
15. EIF3E ENSGALG00000037067 36561 0.912 - - - - - - - 0.912 - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
16. PAPOLA ENSGALG00000033099 20532 0.911 - - - - 0.911 - - - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
17. METTL23 ENSGALG00000001790 7906 0.909 - - - - 0.909 - - - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
18. CCT4 ENSGALG00000008812 78267 0.909 - - - - 0.909 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
19. STRAP ENSGALG00000013092 13100 0.908 - - - - 0.908 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
20. SELT SELT 25524 0.908 - - - - - - - 0.908 - -
21. ADD3 ENSGALG00000008542 13814 0.906 - - - - 0.906 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
22. C20H20ORF24 ENSGALG00000001054 22026 0.904 - - - - 0.904 - - - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
23. PSMC2 ENSGALG00000008236 25980 0.904 - - - - 0.904 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
24. RANGAP1 ENSGALG00000011966 20170 0.904 - - - - 0.904 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
25. PSPC1 ENSGALG00000017142 13036 0.904 - - - - 0.904 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
26. LARP1 ENSGALG00000040109 14808 0.902 - - - - 0.902 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
27. RPL24 ENSGALG00000015339 227460 0.901 - - - - 0.901 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
28. GFPT1 ENSGALG00000036391 14025 0.901 - - - - 0.901 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
29. MRPL23 ENSGALG00000006561 13737 0.901 - - - - 0.901 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
30. MT-ATP8 MT-ATP8 28754 0.9 - - - - - - 0.900 - - -
31. SMC2 ENSGALG00000015691 34013 0.9 - - - - 0.900 - - - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
32. NDUFA8 ENSGALG00000040987 49453 0.899 - - - - 0.899 - - - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
33. MRPS25 ENSGALG00000008506 12131 0.899 - - - - 0.899 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
34. PCBP4 ENSGALG00000027695 7937 0.897 - - - - 0.897 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
35. FH ENSGALG00000013165 13669 0.896 - - - - 0.896 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
36. NOP58 ENSGALG00000008454 34630 0.896 - - - - 0.896 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
37. IGBP1 ENSGALG00000044628 9200 0.895 - - - - 0.895 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
38. RCAN3 ENSGALG00000004282 7778 0.894 - - - - 0.894 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
39. MKI67 ENSGALG00000025996 28136 0.893 - - - - 0.893 - - - - - marker of proliferation Ki-67, transcript variant X3
40. ENSGALG00000014852 ENSGALG00000014852 15288 0.893 - - - - 0.893 - - - - -
41. GBAS 18453 0.893 - - - - 0.893 - - - - - glioblastoma amplified sequence
42. ATP2A2 ENSGALG00000032287 12734 0.893 - - - - 0.893 - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
43. PUM1 ENSGALG00000042598 9392 0.89 - - - - 0.890 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
44. PTPN12 9302 0.889 - - - - 0.889 - - - - - protein tyrosine phosphatase, non-receptor type 12
45. COIL ENSGALG00000003158 7806 0.889 - - - - 0.889 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
46. TK2 ENSGALG00000034216 5394 0.889 - - - - 0.889 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
47. TLK2 ENSGALG00000000410 4690 0.888 - - - - 0.888 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
48. STK3 ENSGALG00000032850 6339 0.888 - - - - 0.888 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
49. PRDX4 ENSGALG00000016357 32208 0.888 - - - - 0.888 - - - - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
50. ATG5 ENSGALG00000015387 7752 0.888 - - - - 0.888 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
51. NAA25 ENSGALG00000041821 12729 0.886 - - - - 0.886 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
52. FBXO9 ENSGALG00000016320 9600 0.885 - - - - 0.885 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
53. COMMD8 ENSGALG00000026279 13509 0.885 - - - - 0.885 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
54. RABEP1 ENSGALG00000001737 2650 0.885 - - - - 0.885 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
55. CSNK1G1 ENSGALG00000030812 31618 0.884 - - - - 0.884 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
56. SIRT1 ENSGALG00000002761 9028 0.883 - - - - 0.883 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
57. SFSWAP ENSGALG00000002487 9977 0.883 - - - - 0.883 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
58. SHROOM2 ENSGALG00000030802 4517 0.883 - - - - 0.883 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
59. CZH9ORF41 CZH9ORF41 3492 0.883 - - - - 0.883 - - - - -
60. BAG4 ENSGALG00000003254 5751 0.883 - - - - 0.883 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
61. NAP1L1 ENSGALG00000010238 14506 0.882 - - - - 0.882 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
62. POLR2B ENSGALG00000011387 4864 0.881 - - - - 0.881 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
63. WDR82 ENSGALG00000025904 4783 0.88 - - - - 0.880 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
64. FERMT2 ENSGALG00000012425 5480 0.88 - - - - 0.880 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
65. KNOP1 ENSGALG00000002042 6251 0.88 - - - - 0.880 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
66. TMEM165 ENSGALG00000027886 5468 0.879 - - - - 0.879 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
67. UBE2N ENSGALG00000030515 32059 0.879 - - - - 0.879 - - - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
68. LATS2 4776 0.879 - - - - 0.879 - - - - - large tumor suppressor kinase 2
69. TLCD1 ENSGALG00000003973 17569 0.878 - - - - 0.878 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
70. PLAA ENSGALG00000001782 5459 0.878 - - - - 0.878 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
71. MRPS27 ENSGALG00000015002 6541 0.878 - - - - 0.878 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
72. EAPP ENSGALG00000010007 5080 0.876 - - - - 0.876 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
73. IGDCC4 ENSGALG00000007410 5457 0.876 - - - - 0.876 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
74. CBWD1 ENSGALG00000010147 2765 0.876 - - - - 0.876 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
75. SAR1B ENSGALG00000038753 6493 0.876 - - - - 0.876 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
76. AATF ENSGALG00000005420 6501 0.875 - - - - 0.875 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
77. TCP11L1 ENSGALG00000011688 2427 0.873 - - - - 0.873 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
78. SSR2 ENSGALG00000000764 32190 0.872 - - - - 0.872 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
79. REEP5 ENSGALG00000023157 6282 0.872 - - - - 0.872 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
80. TRAPPC12 ENSGALG00000016387 2593 0.872 - - - - 0.872 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
81. REST 2394 0.871 - - - - 0.871 - - - - - RE1 silencing transcription factor
82. RAP1B ENSGALG00000009927 26562 0.87 - - - - 0.870 - - - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
83. XPO7 ENSGALG00000001838 1875 0.87 - - - - 0.870 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
84. DNAJC12 ENSGALG00000002769 1418 0.87 - - - - 0.870 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
85. ZBTB10 ENSGALG00000034376 3271 0.87 - - - - 0.870 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
86. ENSGALG00000011687 ENSGALG00000011687 4553 0.87 - - - - 0.870 - - - - -
87. EXO1 ENSGALG00000010748 7572 0.868 - - - - 0.868 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
88. NFASC ENSGALG00000031776 4264 0.868 - - - - 0.868 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
89. DDX55 ENSGALG00000003298 2315 0.868 - - - - 0.868 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
90. ELL2 ENSGALG00000014678 1111 0.868 - - - - 0.868 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
91. SSPN ENSGALG00000014042 638 0.867 - - - - 0.867 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
92. IGF1R ENSGALG00000040651 772 0.866 - - - - 0.866 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
93. POLR3F ENSGALG00000008749 5645 0.866 - - - - 0.866 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
94. CTSZ ENSGALG00000007462 630 0.865 - - - - 0.865 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
95. CDC42SE2 ENSGALG00000027258 4725 0.865 - - - - 0.865 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
96. SH2D3C ENSGALG00000005036 5101 0.863 - - - - 0.863 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
97. PTTG1 17936 0.862 - - - - 0.862 - - - - - pituitary tumor-transforming 1, transcript variant X1
98. LY6E ENSGALG00000041621 16227 0.862 - - - - 0.862 - - - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
99. YY1 ENSGALG00000017388 1933 0.854 - - - - 0.854 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
100. CTDP1 ENSGALG00000031461 4818 0.851 - - - - - - - 0.851 - - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]

There are 153 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA