Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRSF1

Gene Name Gene ID Reads Annotation
SRSF1 ENSGALG00000005525 4376 serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]











Genes with expression patterns similar to SRSF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRSF1 ENSGALG00000005525 4376 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
2. DAD1 ENSGALG00000035626 32604 1.64 - - - - - - 0.796 0.844 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
3. C26H6ORF89 C26H6ORF89 1826 1.599 - - 0.755 - - - 0.844 - - -
4. WDR3 ENSGALG00000014791 5856 1.59 - - - - - - 0.856 0.734 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
5. RAB40C ENSGALG00000030481 3095 1.578 - - - - - - 0.830 0.748 - - RAB40C, member RAS oncogene family [Source:NCBI gene;Acc:769960]
6. R3HDM1 ENSGALG00000012246 6580 1.562 - - - - - - 0.728 0.834 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
7. CCDC135 CCDC135 220 1.561 - - 0.771 - - - 0.790 - - -
8. VPS8 ENSGALG00000006704 5419 1.547 - - - - - - 0.823 0.724 - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
9. MCM3AP ENSGALG00000004363 3247 1.537 - - - - - - 0.785 0.752 - - minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
10. HSCB ENSGALG00000005706 12953 1.532 - - - - - - 0.774 0.758 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
11. TRAPPC6B ENSGALG00000010157 7567 1.532 - - - - - - 0.744 0.788 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
12. PLXNB2 ENSGALG00000039861 338 1.529 - - 0.739 - - - 0.790 - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
13. AKR7L ENSGALG00000004005 6040 1.525 - - - - - - - 0.737 0.788 - aldo-keto reductase family 7 like (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:24056]
14. NOP16 ENSGALG00000003355 10692 1.521 - - - - - - 0.778 0.743 - - NOP16 nucleolar protein
15. UBE2Q2 3861 1.517 - - - - - - 0.811 - 0.706 - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
16. NCBP2 ENSGALG00000006843 938 1.511 - - 0.723 - - - 0.788 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
17. MICALL1 ENSGALG00000012265 3753 1.496 - - - - - - 0.773 0.723 - - MICAL like 1 [Source:NCBI gene;Acc:418032]
18. ENTPD4 ENSGALG00000000390 1394 1.476 - - 0.736 - - - 0.740 - - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
19. EGFR ENSGALG00000038089 1526 1.473 - - - - - - 0.748 0.725 - - epidermal growth factor receptor [Source:NCBI gene;Acc:396494]
20. KIF11 ENSGALG00000030597 5528 1.47 - - - - - - 0.735 0.735 - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
21. AGO3 ENSGALG00000043711 5086 1.464 - - - - - - 0.726 0.738 - - argonaute 3, RISC catalytic component [Source:NCBI gene;Acc:419628]
22. SPDL1 ENSGALG00000001942 4403 1.459 - - - - - - 0.711 0.748 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
23. ADRM1 ENSGALG00000005200 5417 1.453 - - - - - - 0.703 0.750 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
24. APRT ENSGALG00000031000 7535 1.45 - - - - - - 0.737 0.713 - - adenine phosphoribosyltransferase [Source:NCBI gene;Acc:100857155]
25. GSK3B ENSGALG00000014977 7950 1.45 - - - - - - 0.715 0.735 - - glycogen synthase kinase 3 beta [Source:HGNC Symbol;Acc:HGNC:4617]
26. RRAGC ENSGALG00000033079 4966 1.438 - - 0.722 - - - - 0.716 - - Ras related GTP binding C [Source:NCBI gene;Acc:419605]
27. HOMER3_1 ENSGALG00000003058, ENSGALG00000003074 1364 1.426 - - - - - - 0.716 0.710 - - homer scaffolding protein 3, transcript variant X4
28. CYP2R1 ENSGALG00000006050 1521 1.41 - - - - - - 0.707 - 0.703 - cytochrome P450 family 2 subfamily R member 1 [Source:HGNC Symbol;Acc:HGNC:20580]
29. C1H12ORF4 2696 0.894 - - - - - - 0.894 - - - chromosome 1 open reading frame, human C12orf4
30. NR2C1 ENSGALG00000011327 5109 0.891 - - - - - - 0.891 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
31. PLK1 ENSGALG00000006110 12892 0.889 - - - - - - - 0.889 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
32. HOXB-7 HOXB-7 2066 0.885 - - - - - - 0.885 - - -
33. Mar-06 Mar-06 1218 0.884 - - - - - - 0.884 - - -
34. QARS ENSGALG00000029980 4207 0.88 - - - - - - 0.880 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
35. SMAD1 ENSGALG00000009977 3540 0.878 - - - - - - 0.878 - - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
36. RAB5C ENSGALG00000003359 5597 0.878 - - - - - - - 0.878 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
37. PHPT1 ENSGALG00000039061 17343 0.876 - - - - - - - 0.876 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
38. RAB21 ENSGALG00000010183 7718 0.864 - - - - - - 0.864 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
39. ADAMTSL1 1479 0.864 - - - - - - 0.864 - - - ADAMTS like 1, transcript variant X3
40. UBAC2 ENSGALG00000016880 1343 0.863 - - - - - - 0.863 - - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
41. RAPGEF5 ENSGALG00000034024 1264 0.856 - - - - - - 0.856 - - - Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]
42. CEP76 ENSGALG00000013858 1809 0.855 - - - - - - 0.855 - - - centrosomal protein 76
43. NFKB1 ENSGALG00000012304 1253 0.855 - - - - - - 0.855 - - - nuclear factor kappa B subunit 1 [Source:NCBI gene;Acc:396033]
44. DMD ENSGALG00000016281 5657 0.85 - - - - - - 0.850 - - - dystrophin [Source:NCBI gene;Acc:396236]
45. CCDC117 ENSGALG00000005784 185 0.85 - - - - - - 0.850 - - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
46. BLCAP ENSGALG00000027126 12200 0.849 - - - - - - 0.849 - - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
47. TFAP2C ENSGALG00000007690 768 0.848 - - - - - - 0.848 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
48. ERLIN2 ENSGALG00000003092 18251 0.848 - - - - - - - 0.848 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
49. MAK16 ENSGALG00000001663 7455 0.847 - - - - - - 0.847 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
50. OXSR1 ENSGALG00000005979 2905 0.847 - - - - - - 0.847 - - - oxidative stress responsive 1
51. CACTIN ENSGALG00000024391 1408 0.846 - - - - - - 0.846 - - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
52. NOL8 ENSGALG00000004750 1433 0.846 - - - - - - 0.846 - - - nucleolar protein 8 [Source:HGNC Symbol;Acc:HGNC:23387]
53. ENSGALG00000027927 ENSGALG00000027927 654 0.846 - - - - - - 0.846 - - -
54. KCNK1 ENSGALG00000011005 1643 0.845 - - - - - - 0.845 - - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
55. RNF207 2949 0.844 - - - - - - 0.844 - - - ring finger protein 207, transcript variant X1
56. AGA ENSGALG00000010716 2299 0.844 - - - - - - 0.844 - - - aspartylglucosaminidase [Source:NCBI gene;Acc:422558]
57. FAM47E-STBD1 FAM47E-STBD1 1148 0.842 - - - - - - 0.842 - - -
58. DNMT3B ENSGALG00000041461 12959 0.841 - - - - - - - 0.841 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
59. SLC30A5 ENSGALG00000014787 5573 0.841 - - - - - - 0.841 - - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
60. TM4SF18 4553 0.841 - - - - - - - 0.841 - - transmembrane 4 L six family member 18, transcript variant X2
61. SYAP1 ENSGALG00000016548 3347 0.84 - - - - - - 0.840 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
62. MCFD2 ENSGALG00000010017 8905 0.84 - - - - - - 0.840 - - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
63. MPZL3 ENSGALG00000021271 1857 0.838 - - - - - - 0.838 - - - myelin protein zero like 3 [Source:NCBI gene;Acc:419778]
64. CABLES1 ENSGALG00000014998 1636 0.838 - - - - - - 0.838 - - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
65. SNX16 ENSGALG00000029678 1104 0.837 - - - - - - 0.837 - - - sorting nexin 16 [Source:NCBI gene;Acc:420202]
66. MN1 ENSGALG00000026119 1808 0.837 - - - - - - 0.837 - - - MN1 proto-oncogene, transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:7180]
67. RCN2 ENSGALG00000039284 17848 0.835 - - - - - - - 0.835 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
68. DPM2 ENSGALG00000005066 9121 0.834 - - - - - - 0.834 - - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
69. DHX35 ENSGALG00000003658 1090 0.833 - - - - - - 0.833 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
70. CLK1 ENSGALG00000028438 3550 0.833 - - - - - - - 0.833 - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
71. ENSGALG00000013067 ENSGALG00000013067 10741 0.833 - - - - - - - 0.833 - -
72. SLC44A3 ENSGALG00000005610 18 0.833 - - - - - 0.833 - - - - solute carrier family 44 member 3 [Source:HGNC Symbol;Acc:HGNC:28689]
73. PSMD13 ENSGALG00000043684 14720 0.831 - - - - - - - 0.831 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
74. TALPID3 TALPID3 1896 0.83 - - - - - - 0.830 - - -
75. NDUFS5 ENSGALG00000003625 27698 0.829 - - - - - - - 0.829 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
76. DNTTIP1 ENSGALG00000003575 4687 0.828 - - - - - - 0.828 - - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
77. METRN ENSGALG00000035634 1871 0.828 - - - - - - 0.828 - - - meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
78. ARFIP1 ENSGALG00000041361 7351 0.828 - - - - - - - 0.828 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
79. NDE1 ENSGALG00000032590 3277 0.828 - - - - - - 0.828 - - - nudE neurodevelopment protein 1 [Source:NCBI gene;Acc:416597]
80. COPS7B ENSGALG00000007752 1588 0.828 - - - - - - 0.828 - - - COP9 signalosome subunit 7B [Source:HGNC Symbol;Acc:HGNC:16760]
81. CSTF1 ENSGALG00000007757 789 0.827 - - - - - - 0.827 - - - cleavage stimulation factor subunit 1 [Source:HGNC Symbol;Acc:HGNC:2483]
82. TOR4A ENSGALG00000008623 1364 0.826 - - - - - - 0.826 - - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
83. AGPAT5 ENSGALG00000016329 1399 0.826 - - - - - - 0.826 - - - 1-acylglycerol-3-phosphate O-acyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:20886]
84. IQCB1 ENSGALG00000011655 378 0.826 - - - - - - 0.826 - - - IQ motif containing B1 [Source:HGNC Symbol;Acc:HGNC:28949]
85. DDX42 ENSGALG00000000581 8780 0.825 - - - - - - - 0.825 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
86. CREBL2 ENSGALG00000037030 1247 0.825 - - - - - - 0.825 - - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
87. DCPS ENSGALG00000031143 10191 0.825 - - - - - - - 0.825 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
88. EMC3 ENSGALG00000003738 10363 0.824 - - - - - - - 0.824 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
89. GPR180 ENSGALG00000016897 1545 0.823 - - - - - - 0.823 - - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
90. SEC62 ENSGALG00000009379 15745 0.823 - - - - - - - 0.823 - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
91. EIF5B ENSGALG00000016764 30681 0.822 - - - - - - - 0.822 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
92. FKBP7 ENSGALG00000009149 6742 0.822 - - - - - - - 0.822 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
93. COG5 ENSGALG00000042764 4205 0.822 - - - - - - 0.822 - - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
94. PCYOX1L ENSGALG00000040340 2162 0.822 - - - - - - 0.822 - - - prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
95. LRRC41 ENSGALG00000010359 709 0.821 - - - - - - 0.821 - - - leucine rich repeat containing 41 [Source:HGNC Symbol;Acc:HGNC:16917]
96. GNB1L ENSGALG00000001925 1981 0.821 - - - - - - 0.821 - - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
97. ADSL ENSGALG00000012034 10280 0.82 - - - - - - - 0.820 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
98. CPT1A ENSGALG00000007077 3199 0.82 - - - - - - - 0.820 - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
99. TLK1 ENSGALG00000009569 5446 0.819 - - - - - - - 0.819 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
100. SCN9A ENSGALG00000027793 161 0.819 - - - - - - 0.819 - - - sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]

There are 751 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA