Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRR_1

Gene Name Gene ID Reads Annotation
SRR_1 SRR_1 0










Genes with expression patterns similar to SRR_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. MFAP4_7 MFAP4_7 43 1 - 1.000 - - - - - - -
2. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -
3. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - 1.000 - - - - - - -
4. SNORA31 SNORA31 23 1 - 1.000 - - - - - - -
5. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
6. chrna6 ENSDARG00000055559 60 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
7. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
8. si:dkey-24p1.7 ENSDARG00000089404 7 1 - 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
9. PTGR2 ENSDARG00000070673 43 1 - 1.000 - - - - - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
10. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
11. CABZ01073954.1 CABZ01073954.1 258 1 - 1.000 - - - - - - -
12. MCMDC2 0 1 - 1.000 - - - - - - - minichromosome maintenance domain containing 2, transcript variant X2
13. CU457778.1 ENSDARG00000098976 38 1 - 1.000 - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
14. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
15. BX321870.1 ENSDARG00000098519 9 1 - 1.000 - - - - - - -
16. b3galtla b3galtla 111 1 - 1.000 - - - - - - -
17. SDR16C5 SDR16C5 34 1 - 1.000 - - - - - - -
18. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -
19. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
20. BX005294.2 ENSDARG00000109361 3 1 - 1.000 - - - - - - -
21. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
22. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
23. mtus2 mtus2 22 1 - 1.000 - - - - - - -
24. cdh18 cdh18 64 1 - 1.000 - - - - - - -
25. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
26. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - 1.000 - - - - - - -
27. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
28. rims1a ENSDARG00000074680 143 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
29. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
30. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
31. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
32. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
33. NFATC4 ENSDARG00000054162 44 1 - 1.000 - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
34. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
35. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
36. aatkb ENSDARG00000104442 392 1 - 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
37. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
38. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
39. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
40. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
41. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
42. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
43. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
44. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
45. PRR12 PRR12 38 1 - 1.000 - - - - - - -
46. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
47. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
48. msgn1 ENSDARG00000070546 188 1 - 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
49. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
50. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
51. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
52. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
53. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
54. si:ch1073-143l10.2 ENSDARG00000094899 32 1 - 1.000 - - - - - - - si:ch1073-143l10.2 [Source:ZFIN;Acc:ZDB-GENE-030131-863]
55. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 - 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
56. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
57. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
58. si:ch211-122l14.8 si:ch211-122l14.8 4 1 - 1.000 - - - - - - -
59. galr1 galr1 9 1 - 1.000 - - - - - - -
60. si:dkey-273e13.2 si:dkey-273e13.2 0 1 - 1.000 - - - - - - -
61. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
62. dmrt1 ENSDARG00000007349 16 1 - 1.000 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
63. fam5b fam5b 45 1 - 1.000 - - - - - - -
64. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
65. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
66. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
67. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
68. BX470131.1 BX470131.1 86 1 - 1.000 - - - - - - -
69. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
70. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
71. ZNF337_11 ZNF337_11 11 1 - 1.000 - - - - - - -
72. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
73. alp3 ENSDARG00000098063 0 1 - 1.000 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
74. fez1 ENSDARG00000023174 701 1 - 1.000 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
75. thbs2a ENSDARG00000060410 0 1 - 1.000 - - - - - - - thrombospondin 2a [Source:ZFIN;Acc:ZDB-GENE-020708-2]
76. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
77. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
78. si:dkey-81p22.11 ENSDARG00000093797 68 1 - 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
79. si:dkeyp-10a3.2 18 1 - 1.000 - - - - - - - si:dkeyp-10a3.2
80. kcnh1a ENSDARG00000024167 9 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
81. kcna1 kcna1 174 1 - 1.000 - - - - - - -
82. SDSL ENSDARG00000074698 34 1 - 1.000 - - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
83. LRG1 LRG1 304 1 - 1.000 - - - - - - -
84. GAS2 18 1 - 1.000 - - - - - - - growth arrest specific 2, transcript variant X1
85. GADD45G_1 GADD45G_1 236 1 - 1.000 - - - - - - -
86. supt3h ENSDARG00000098141 18 1 - 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
87. prl ENSDARG00000037946 80 1 - 1.000 - - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
88. C24H11orf65 C24H11orf65 1 1 - 1.000 - - - - - - -
89. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
90. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
91. CABZ01068324.1 CABZ01068324.1 4 1 - 1.000 - - - - - - -
92. tmem178 ENSDARG00000020758 77 1 - 1.000 - - - - - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
93. CABZ01021538.1 CABZ01021538.1 67 1 - 1.000 - - - - - - -
94. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
95. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - 1.000 - - - - - - -
96. wdr17 ENSDARG00000075098 83 1 - 1.000 - - - - - - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
97. st6gal1 ENSDARG00000044514 142 1 - 1.000 - - - - - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
98. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - 1.000 - - - - - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
99. CABZ01007222.1 CABZ01007222.1 78 1 - 1.000 - - - - - - -
100. si:ch211-237l4.6 ENSDARG00000056915 49 1 - 1.000 - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]

There are 270 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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