Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRR_1

Gene Name Gene ID Reads Annotation
SRR_1 SRR_1 0










Genes with expression patterns similar to SRR_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. U1_4 U1_4 0 1 - 1.000 - - - - - - -
2. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
3. kif20a ENSDARG00000044491 12 1 - 1.000 - - - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
4. si:dkeyp-77c8.1 ENSDARG00000093940 0 1 - 1.000 - - - - - - - si:dkeyp-77c8.1 [Source:ZFIN;Acc:ZDB-GENE-090313-397]
5. FBXO40_1 FBXO40_1 59 1 - 1.000 - - - - - - -
6. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
7. LRG1 LRG1 304 1 - 1.000 - - - - - - -
8. SNORA31 SNORA31 23 1 - 1.000 - - - - - - -
9. galr1 galr1 9 1 - 1.000 - - - - - - -
10. zgc:174224_1 ENSDARG00000093875 7 1 - 1.000 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
11. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - 1.000 - - - - - - -
12. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
13. CABZ01057951.1 CABZ01057951.1 10 1 - 1.000 - - - - - - -
14. cdh18 cdh18 64 1 - 1.000 - - - - - - -
15. entpd2b ENSDARG00000044795 7 1 - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
16. lrrc18b ENSDARG00000076236 5 1 - 1.000 - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
17. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - 1.000 - - - - - - -
18. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - 1.000 - - - - - - -
19. fam43b ENSDARG00000070222 92 1 - 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
20. zgc:66455 ENSDARG00000052375 3 1 - 1.000 - - - - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
21. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
22. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - 1.000 - - - - - - -
23. mtus2 mtus2 22 1 - 1.000 - - - - - - -
24. FAIM2 FAIM2 43 1 - 1.000 - - - - - - -
25. si:ch73-7i4.1 ENSDARG00000094554 771 1 - 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
26. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
27. si:ch211-122l14.8 si:ch211-122l14.8 4 1 - 1.000 - - - - - - -
28. alp3 ENSDARG00000098063 0 1 - 1.000 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
29. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
30. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -
31. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
32. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - 1.000 - - - - - - -
33. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - 1.000 - - - - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
34. lsm10 5 1 - 1.000 - - - - - - - LSM10, U7 small nuclear RNA associated
35. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
36. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
37. olfm1a ENSDARG00000018270 107 1 - 1.000 - - - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
38. si:dkey-222h21.4 1 1 - 1.000 - - - - - - - si:dkey-222h21.4
39. slc1a9 ENSDARG00000098269 12 1 - 1.000 - - - - - - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
40. CABZ01021538.1 CABZ01021538.1 67 1 - 1.000 - - - - - - -
41. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
42. CR626874.1 ENSDARG00000100141 55 1 - 1.000 - - - - - - -
43. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
44. b3galtla b3galtla 111 1 - 1.000 - - - - - - -
45. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
46. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
47. FP236851.1 FP236851.1 10 1 - 1.000 - - - - - - -
48. adam10b ENSDARG00000015502 26 1 - 1.000 - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
49. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - 1.000 - - - - - - -
50. CR792453.1 ENSDARG00000095699 4 1 - 1.000 - - - - - - -
51. ODF2 ODF2 6 1 - 1.000 - - - - - - -
52. GAS2 18 1 - 1.000 - - - - - - - growth arrest specific 2, transcript variant X1
53. PTGR2 ENSDARG00000070673 43 1 - 1.000 - - - - - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
54. CABZ01008480.1 CABZ01008480.1 0 1 - 1.000 - - - - - - -
55. LRFN4_1 LRFN4_1 5 1 - 1.000 - - - - - - -
56. si:dkey-193c22.1 ENSDARG00000093687 104 1 - 1.000 - - - - - - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
57. chrna6 ENSDARG00000055559 60 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
58. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - 1.000 - - - - - - -
59. si:ch211-188i4.4 5 1 - 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
60. SNORD59 SNORD59 7 1 - 1.000 - - - - - - -
61. bmp1b ENSDARG00000028053 25 1 - 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
62. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
63. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
64. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
65. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1 - 1.000 - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
66. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
67. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
68. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
69. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
70. cybb ENSDARG00000056615 177 1 - 1.000 - - - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
71. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
72. arhgef9a ENSDARG00000061746 58 1 - 1.000 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
73. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
74. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
75. si:ch211-214j24.15 ENSDARG00000063481 8 1 - 1.000 - - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
76. FAXC FAXC 102 1 - 1.000 - - - - - - -
77. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - 1.000 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
78. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
79. tnxb 30 1 - 1.000 - - - - - - - tenascin XB
80. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
81. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
82. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
83. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
84. il12bb ENSDARG00000054542 6 1 - 1.000 - - - - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
85. pja2 ENSDARG00000100296 1 1 - 1.000 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
86. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
87. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
88. kcnh1a ENSDARG00000024167 9 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
89. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
90. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
91. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -
92. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
93. apnl ENSDARG00000090900 21 1 - 1.000 - - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
94. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
95. scg2b ENSDARG00000038574 345 1 - 1.000 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
96. si:rp71-36a1.3 ENSDARG00000071662 2 1 - 1.000 - - - - - - - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
97. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
98. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - 1.000 - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
99. PRR12 PRR12 38 1 - 1.000 - - - - - - -
100. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]

There are 270 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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