Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRRD

Gene Name Gene ID Reads Annotation
SRRD ENSGALG00000005614 234 SRR1 domain containing [Source:NCBI gene;Acc:416908]











Genes with expression patterns similar to SRRD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRRD ENSGALG00000005614 234 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRR1 domain containing [Source:NCBI gene;Acc:416908]
2. HS1BP3 ENSGALG00000016486 380 1.689 - - - - - - - - 0.784 0.905 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
3. ITM2B ENSGALG00000016996 1112 1.654 - - - - - - - - 0.761 0.893 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
4. MYO3A ENSGALG00000007647 643 1.612 - - - - 0.771 - - - 0.841 - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
5. RBMX2 809 1.552 - - - - - - - - 0.819 0.733 RNA binding motif protein, X-linked 2, transcript variant X3
6. VPS13B 2293 1.491 - - - - - 0.721 - - 0.770 - vacuolar protein sorting 13 homolog B
7. DHRS7B ENSGALG00000004759 2193 1.458 - - - - - - - - 0.715 0.743 dehydrogenase/reductase 7B [Source:HGNC Symbol;Acc:HGNC:24547]
8. PITX1 ENSGALG00000030237 842 0.947 - - - - 0.947 - - - - - paired like homeodomain 1 [Source:NCBI gene;Acc:374201]
9. ZMYND10 ENSGALG00000035883 58 0.946 - - - - - - - - - 0.946 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
10. BOK ENSGALG00000005772 117 0.946 - - - - - - - - - 0.946 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
11. TNFAIP3 ENSGALG00000013861 11 0.944 - - - - - - - - - 0.944 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
12. NMBR ENSGALG00000013813 15 0.944 - - - - - - - - - 0.944 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
13. gga-mir-6544 ENSGALG00000027916 19 0.944 - - - - - - - - - 0.944 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
14. TRMT61A ENSGALG00000011522 14 0.944 - - - - - - - - - 0.944 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
15. LRRC72 9 0.943 - - - - 0.943 - - - - - leucine rich repeat containing 72, transcript variant X4
16. C3orf58 ENSGALG00000002347 27 0.942 - - - - - - - - - 0.942 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
17. TRAK2 ENSGALG00000008370 46 0.941 - - - - - - - - - 0.941 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
18. TNN ENSGALG00000004538 21 0.939 - - - - - - - - - 0.939 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
19. IRF-4 IRF-4 19 0.938 - - - - 0.938 - - - - -
20. CLIC3 ENSGALG00000038789 233 0.937 - - - - - - - - - 0.937 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
21. LOC416530 ENSGALG00000005291 207 0.937 - - - - 0.937 - - - - - uncharacterized LOC416530, transcript variant X1
22. AKAP11 ENSGALG00000022739 82 0.936 - - - - - - - - - 0.936 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
23. SLC7A2 ENSGALG00000013627 58 0.936 - - - - - - - - - 0.936 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
24. PKD2 ENSGALG00000010921 55 0.935 - - - - - - - - - 0.935 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
25. TBX5 ENSGALG00000008253 820 0.934 - - - - - - - - - 0.934 T-box 5 [Source:NCBI gene;Acc:373988]
26. TMEM200B ENSGALG00000024318 117 0.934 - - - - - - - - - 0.934 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
27. ERRFI1 ENSGALG00000000535 83 0.933 - - - - - - - - - 0.933 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
28. ENSGALG00000018879 ENSGALG00000018879 9 0.931 - - - - 0.931 - - - - -
29. GPR132 ENSGALG00000027407 9 0.931 - - - - 0.931 - - - - - G protein-coupled receptor 132, transcript variant X2
30. BRD8 ENSGALG00000037646 100 0.931 - - - - 0.931 - - - - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
31. SMEK1 SMEK1 95 0.93 - - - - - - - - - 0.930
32. KIF24 ENSGALG00000005806 124 0.929 - - - - - - - - - 0.929 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
33. ROGDI ENSGALG00000001841 313 0.928 - - - - - - - - - 0.928 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
34. KAT6B ENSGALG00000005035 301 0.928 - - - - - - - - - 0.928 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
35. TM6SF1 ENSGALG00000006027 20 0.927 - - - - - - - - - 0.927 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
36. NME6 ENSGALG00000038044 1231 0.926 - - - - - - - - - 0.926 NME/NM23 nucleoside diphosphate kinase 6
37. TRAF-5 TRAF-5 102 0.925 - - - - - - - - - 0.925
38. SENP7 ENSGALG00000044642 48 0.925 - - - - - - - - - 0.925 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
39. STXBP5L ENSGALG00000032361 41 0.923 - - - - 0.923 - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
40. TNFAIP2 ENSGALG00000011446 32 0.923 - - - - - - - - - 0.923 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
41. KIAA0895 ENSGALG00000036301 280 0.922 - - - - - - - - - 0.922 KIAA0895 [Source:HGNC Symbol;Acc:HGNC:22206]
42. INADL INADL 51 0.921 - - - - - - - - - 0.921
43. PHF11 ENSGALG00000019094 770 0.92 - - - - - - - - - 0.920 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
44. KCNB1 ENSGALG00000004758 620 0.919 - - - - - - - - - 0.919 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
45. LRRC10 ENSGALG00000009976 318 0.919 - - - - 0.919 - - - - - leucine rich repeat containing 10 [Source:HGNC Symbol;Acc:HGNC:20264]
46. TRAIP ENSGALG00000002908 6901 0.918 - - - - - - - - - 0.918 TRAF interacting protein [Source:NCBI gene;Acc:415927]
47. RAB4A ENSGALG00000036218 20 0.916 - - - - 0.916 - - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
48. ING5 ENSGALG00000006317 149 0.915 - - - - - - - - - 0.915 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
49. SLC20A1 ENSGALG00000013740 40 0.914 - - - - - - - - - 0.914 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
50. TMEM116 ENSGALG00000004760 217 0.913 - - - - - - - - - 0.913 transmembrane protein 116 [Source:HGNC Symbol;Acc:HGNC:25084]
51. FAM154B FAM154B 175 0.913 - - - - - - - - - 0.913
52. GSS ENSGALG00000003281 57 0.913 - - - - - - - - - 0.913 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
53. ZNF385B ENSGALG00000009012 290 0.913 - - - - - - - - - 0.913 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
54. GCNT7 ENSGALG00000007717 11 0.911 - - - - 0.911 - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
55. KSR1 ENSGALG00000005685 78 0.911 - - - - 0.911 - - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
56. MYCN ENSGALG00000016462 1930 0.91 - - - - - - - - - 0.910 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
57. BMP2K ENSGALG00000010885 37 0.907 - - - - - - - - - 0.907 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
58. PDE3A ENSGALG00000013143 28 0.906 - - - - - - - - - 0.906 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
59. LMBR1 ENSGALG00000030379 29 0.906 - - - - - - - - - 0.906 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
60. TGFBRAP1 ENSGALG00000016795 81 0.905 - - - - - - - - - 0.905 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
61. KIAA0232 ENSGALG00000015538 717 0.904 - - - - - - - - 0.904 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
62. ZEB2 ENSGALG00000040465 315 0.903 - - - - - - - - - 0.903 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
63. OSBPL2 ENSGALG00000005195 94 0.903 - - - - - - - - - 0.903 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
64. PXK ENSGALG00000007052 121 0.902 - - - - - - - - - 0.902 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
65. IFT27 ENSGALG00000042990 221 0.9 - - - - - - - - 0.900 - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
66. GALNT11 ENSGALG00000006233 210 0.897 - - - - 0.897 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
67. SMOC2 ENSGALG00000011205 340 0.891 - - - - - - - - - 0.891 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
68. CCDC113 20 0.891 - - - - 0.891 - - - - - coiled-coil domain containing 113, transcript variant X2
69. ATF2 ENSGALG00000009287 73 0.891 - - - - - - - - - 0.891 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
70. TDRD9 ENSGALG00000011565 146 0.888 - - - - - - - - - 0.888 tudor domain containing 9 [Source:HGNC Symbol;Acc:HGNC:20122]
71. SRR ENSGALG00000003155 93 0.886 - - - - - - - - - 0.886 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
72. LMTK2 ENSGALG00000003479 46 0.885 - - - - - - 0.885 - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
73. GZMA ENSGALG00000013548 22 0.885 - - - - - - 0.885 - - - granzyme A [Source:NCBI gene;Acc:395108]
74. SERAC1 ENSGALG00000013732 24 0.884 - - - - - - - - - 0.884 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
75. VPS51 ENSGALG00000004166 204 0.883 - - - - - - - - 0.883 - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
76. NIF3L1 ENSGALG00000008226 1500 0.883 - - - - - - - - 0.883 - NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]
77. RAD1 ENSGALG00000003365 1417 0.882 - - - - - - - - - 0.882 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
78. TRMT11 ENSGALG00000014831 305 0.881 - - - - - - - - - 0.881 tRNA methyltransferase 11 homolog [Source:NCBI gene;Acc:378793]
79. BLOC1S2 ENSGALG00000005794 544 0.881 - - - - - - - - - 0.881 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
80. MYH11 ENSGALG00000006520 166 0.88 - - - - - - - - - 0.880 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
81. MCOLN3 ENSGALG00000008709 21 0.88 - - - - 0.880 - - - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
82. SLC30A9 ENSGALG00000031415 36 0.878 - - - - - - - - - 0.878 solute carrier family 30 member 9
83. MASP2 ENSGALG00000003016 35 0.878 - - - - 0.878 - - - - - mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
84. ZDHHC5 ENSGALG00000007362 296 0.877 - - - - 0.877 - - - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
85. SETX ENSGALG00000003661 701 0.877 - - - - - - - - 0.877 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
86. CREB5 ENSGALG00000038265 92 0.877 - - - - - - - - - 0.877 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
87. NR5A2 ENSGALG00000002182 392 0.877 - - - - - - - - - 0.877 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]
88. SNRK ENSGALG00000039920 174 0.876 - - - - - - - - 0.876 - SNF related kinase [Source:NCBI gene;Acc:420675]
89. TSPAN1 106 0.875 - - - - 0.875 - - - - - tetraspanin 1
90. KCNB2 ENSGALG00000031693 31 0.874 - - - - - - - - - 0.874 potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
91. FMR1 ENSGALG00000009177 561 0.873 - - - - - - - - 0.873 - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
92. BPHL ENSGALG00000029659 501 0.873 - - - - - - - - 0.873 - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
93. NAALAD2 202 0.872 - - - - - - - - - 0.872 N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
94. NAPG ENSGALG00000013932 67 0.871 - - - - - - - - - 0.871 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
95. COQ2 ENSGALG00000041294 25 0.87 - - - - - - - - - 0.870 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
96. LARP6 ENSGALG00000004046 97 0.869 - - - - 0.869 - - - - - La ribonucleoprotein domain family member 6 [Source:HGNC Symbol;Acc:HGNC:24012]
97. FGF12 ENSGALG00000036971 2631 0.869 - - - - - - - - 0.869 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
98. AIDA ENSGALG00000009426 219 0.867 - - - - - - - - 0.867 - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
99. PIK3R3 ENSGALG00000010335 374 0.867 - - - - 0.867 - - - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
100. FAM192A ENSGALG00000021473 10213 0.866 - - - - - - - - - 0.866 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]

There are 327 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA