Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRR

Gene Name Gene ID Reads Annotation
SRR ENSGALG00000003155 93 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]











Genes with expression patterns similar to SRR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRR ENSGALG00000003155 93 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
2. INADL INADL 51 1.945 - - - - - - 1.000 - - 0.945
3. NPR2 ENSGALG00000027630 871 1.83 - - - 0.833 - - - 0.997 - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
4. TMEM161A ENSGALG00000025809 2813 1.788 - - - 0.837 - - - 0.951 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
5. CLCN5 ENSGALG00000007234 1143 1.763 - - - - - - - 0.989 - 0.774 chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
6. CABP1 ENSGALG00000007116 54 1.69 - - - 0.891 - - 0.799 - - - calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1384]
7. SMOC2 ENSGALG00000011205 340 1.678 - - - 0.793 - - - - - 0.885 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
8. LMBR1 ENSGALG00000030379 29 1.676 - - 0.761 - - - - - - 0.915 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
9. NMB ENSGALG00000043506 1387 1.674 - - - - - - - 0.906 - 0.768 neuromedin B [Source:NCBI gene;Acc:415333]
10. ITFG2 ENSGALG00000014335 1896 1.645 - - - - - - - 0.885 - 0.760 integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
11. TTK ENSGALG00000015874 1610 1.432 - - - - - - - 0.722 - 0.710 TTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]
12. DMRTB1 ENSGALG00000029023 35 1 - - - - - - 1.000 - - - DMRT like family B with proline rich C-terminal 1 [Source:NCBI gene;Acc:429107]
13. GDAP1L1 ENSGALG00000004309 47 1 - - - - - - 1.000 - - - ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
14. TIGD3 TIGD3 36 1 - - - - - - 1.000 - - -
15. ANKRD44 ENSGALG00000007996 17 1 - - - - - - 1.000 - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
16. DOCK9 ENSGALG00000016883 128 1 - - - - - - 1.000 - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
17. FGF22 ENSGALG00000041822 37 1 - - - - - - 1.000 - - - fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
18. BDKRB2 ENSGALG00000011080 12 1 - - - - - - 1.000 - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
19. ANO2 ENSGALG00000017271 4 1 - - - - - - 1.000 - - - anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]
20. OTOP3 ENSGALG00000028214 1 1 - - - - - - 1.000 - - - otopetrin 3 [Source:HGNC Symbol;Acc:HGNC:19658]
21. ENSGALG00000024286 ENSGALG00000024286 2 1 - - - - - - 1.000 - - -
22. ENSGALG00000022155 ENSGALG00000022155 80 1 - - - - - - 1.000 - - -
23. SNORA4 SNORA4 12 1 - - - - - - 1.000 - - -
24. KCNJ15 ENSGALG00000016055 66 1 - - - - - - 1.000 - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
25. B4GALT2 ENSGALG00000010094 36 1 - - - - - - 1.000 - - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
26. MAPK13 ENSGALG00000030966 1 1 - - - - - - 1.000 - - - mitogen-activated protein kinase 13 [Source:HGNC Symbol;Acc:HGNC:6875]
27. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - 1.000 - - -
28. ENSGALG00000013985 ENSGALG00000013985 11 1 - - - - - - 1.000 - - -
29. RNF165 ENSGALG00000031018 4 1 - - - - - - 1.000 - - - ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
30. AMHR2 ENSGALG00000012055 55 1 - - - - - - 1.000 - - - anti-Mullerian hormone receptor, type II, transcript variant X1
31. CLCA1 ENSGALG00000006322 5 1 - - - - - - 1.000 - - - chloride channel accessory 1 [Source:HGNC Symbol;Acc:HGNC:2015]
32. MFHAS1 ENSGALG00000011444 7 1 - - - - - - 1.000 - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
33. ENSGALG00000020349 ENSGALG00000020349 10 1 - - - - - - 1.000 - - -
34. PRG4 3 1 - - - - - - 1.000 - - - proteoglycan 4
35. ENSGALG00000012928 ENSGALG00000012928 2 1 - - - - - - 1.000 - - -
36. TTC7B ENSGALG00000010680 4 1 - - - - - - 1.000 - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
37. TMEFF2 ENSGALG00000007759 93 1 - - - - - - 1.000 - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
38. TROVE2 ENSGALG00000002504 14 1 - - - - - - 1.000 - - - TROVE domain family member 2 [Source:HGNC Symbol;Acc:HGNC:11313]
39. PPIL6 ENSGALG00000015237 11 1 - - - - - - 1.000 - - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
40. FAM149B1 ENSGALG00000002693 16 1 - - - - - - 1.000 - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
41. ADCY1 ENSGALG00000031170 4 1 - - - - - - 1.000 - - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
42. MYO1E ENSGALG00000004150 40 1 - - - - - - 1.000 - - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
43. TIAM1 ENSGALG00000015842 17 1 - - - - - - 1.000 - - - T cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:HGNC:11805]
44. OGFRL1 ENSGALG00000015951 69 1 - - - - - - 1.000 - - - opioid growth factor receptor like 1 [Source:HGNC Symbol;Acc:HGNC:21378]
45. TMEM156 ENSGALG00000024490 9 1 - - - - - - 1.000 - - - transmembrane protein 156, transcript variant X5
46. IL8 ENSGALG00000026098 16 1 - - - - - - 1.000 - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
47. ABCA2 ENSGALG00000036894 12 1 - - - - - - 1.000 - - - ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]
48. GTPBP6 ENSGALG00000016717 17 1 - - - - - - 1.000 - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
49. RPA3-AS1 RPA3-AS1 2 1 - - - - - - 1.000 - - -
50. SPAG17 55 1 - - - - - - 1.000 - - - sperm associated antigen 17
51. GRIA4 ENSGALG00000038995 29 1 - - - - - - 1.000 - - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
52. ENSGALG00000021344 ENSGALG00000021344 50 1 - - - - - - 1.000 - - -
53. SPEF2 ENSGALG00000023552 23 1 - - - - - - 1.000 - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
54. SNORA73 SNORA73 1644 1 - - - - - - 1.000 - - -
55. CLDN15 ENSGALG00000038964 21 1 - - - - - - 1.000 - - - claudin 15, transcript variant X4
56. KLHL23 ENSGALG00000020737 13 1 - - - - - - 1.000 - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
57. IL10R1 IL10R1 9 1 - - - - - - 1.000 - - -
58. INSRR ENSGALG00000013253 54 1 - - - - - - 1.000 - - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
59. RFX7 ENSGALG00000041896 69 0.999 - - - - - - - 0.999 - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
60. TRPC1 ENSGALG00000002639 296 0.999 - - - - - - - 0.999 - - transient receptor potential cation channel subfamily C member 1 [Source:NCBI gene;Acc:424776]
61. ENSGALG00000011233 ENSGALG00000011233 42 0.999 - - - - - - - 0.999 - -
62. DMA DMA 1012 0.999 - - - - - - - 0.999 - -
63. CRABP2 ENSGALG00000029140 559 0.998 - - - - - - - 0.998 - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
64. RBM46 ENSGALG00000009278 98 0.997 - - - - - - - 0.997 - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
65. PAIP1 ENSGALG00000014867 202 0.996 - - - - - - - 0.996 - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
66. SPATA2L ENSGALG00000044991 463 0.996 - - - - - - - 0.996 - - spermatogenesis associated 2 like [Source:HGNC Symbol;Acc:HGNC:28393]
67. NRG1 ENSGALG00000015422 196 0.995 - - - - - - - 0.995 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
68. APBB2 ENSGALG00000014262 569 0.992 - - - - - - - 0.992 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
69. KIAA1009 KIAA1009 1261 0.991 - - - - - - - 0.991 - -
70. ABHD12B ENSGALG00000020342 511 0.99 - - - - - - - 0.990 - - abhydrolase domain containing 12B, transcript variant X2
71. CCDC117 ENSGALG00000005784 185 0.99 - - - - - - - 0.990 - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
72. GP1BB ENSGALG00000021529 348 0.989 - - - - - - - 0.989 - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
73. ZNF750 ENSGALG00000001518 151 0.988 - - - - - - - 0.988 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
74. ASTN2 ENSGALG00000007038 1748 0.987 - - - - - - - 0.987 - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
75. SLC25A28 ENSGALG00000007479 4902 0.986 - - - - - - - 0.986 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
76. HAGHL ENSGALG00000021040 1568 0.985 - - - - - - - 0.985 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
77. RIMKLB ENSGALG00000040184 281 0.984 - - - - - - - 0.984 - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
78. SPATA2 ENSGALG00000008026 2040 0.984 - - - - - - - 0.984 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
79. TPM3 ENSGALG00000013537 934 0.983 - - - - - - - 0.983 - - Gallus gallus tropomyosin 3 (TPM3), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352039]
80. ANGPTL1 ENSGALG00000004290 1922 0.981 - - - - - - - 0.981 - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
81. CCDC80 ENSGALG00000015193 1387 0.98 - - - - - - - 0.980 - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
82. GKAP1 ENSGALG00000012586 2908 0.978 - - - - - - - 0.978 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
83. RASAL2 ENSGALG00000004323 55 0.976 - - - 0.976 - - - - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
84. PKN3 532 0.975 - - - - - - - 0.975 - - protein kinase N3, transcript variant X2
85. ARNTL2 ENSGALG00000014096 998 0.973 - - - - - - - 0.973 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
86. NUDT6 ENSGALG00000011834 1309 0.972 - - - - - - - 0.972 - - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
87. ITFG1 ENSGALG00000004049 2934 0.969 - - - - - - - 0.969 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
88. LRIG3 ENSGALG00000009755 6655 0.968 - - - - - - - 0.968 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
89. TXNDC11 ENSGALG00000003154 2224 0.967 - - - - - - - 0.967 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
90. BUD13 ENSGALG00000025882 1800 0.967 - - - - - - - 0.967 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
91. EPGN ENSGALG00000010859 187 0.967 - - - - - - - 0.967 - - epithelial mitogen [Source:NCBI gene;Acc:497270]
92. SELENBP1 ENSGALG00000000866 1253 0.966 - - - - - - - 0.966 - - selenium binding protein 1 [Source:NCBI gene;Acc:425664]
93. HOOK1 ENSGALG00000010889 1007 0.965 - - - - - - - 0.965 - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
94. ZBTB18 ENSGALG00000010705 3433 0.964 - - - - - - - 0.964 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
95. MAOB ENSGALG00000032836 1054 0.963 - - - - - - - 0.963 - - monoamine oxidase B
96. ENSGALG00000018634 ENSGALG00000018634 414 0.962 - - - - - - - 0.962 - -
97. ENTPD4 ENSGALG00000000390 1394 0.962 - - - - - - - 0.962 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
98. SH3TC1 ENSGALG00000015568 484 0.962 - - - - - - - 0.962 - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
99. EFCAB10 ENSGALG00000045949 514 0.96 - - - - - - - 0.960 - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
100. ATP1B3 ENSGALG00000002764 1890 0.96 - - - - - - - 0.960 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]

There are 469 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA