Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SRPR

Gene Name Gene ID Reads Annotation
SRPR SRPR 21067











Genes with expression patterns similar to SRPR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRPR SRPR 21067 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. AP3B2 2331 1.758 - - - - - - 0.985 - - 0.773 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
3. DCTN3 ENSGALG00000021365 22839 1.645 - - - - - - 0.901 - - 0.744 dynactin subunit 3 [Source:NCBI gene;Acc:427404]
4. RNF4 ENSGALG00000015668 15780 0.996 - - - - - - 0.996 - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
5. UFM1 ENSGALG00000017042 15794 0.996 - - - - - - 0.996 - - - ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]
6. NUS1 ENSGALG00000014899 13352 0.995 - - - - - - 0.995 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:21042]
7. ENSGALG00000023447 ENSGALG00000023447 17486 0.995 - - - - - - 0.995 - - -
8. TPX2 ENSGALG00000006267 26087 0.995 - - - - - - 0.995 - - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
9. CKS1B ENSGALG00000028664 42261 0.994 - - - - - - 0.994 - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
10. USMG5 ENSGALG00000034645 33263 0.994 - - - - - - 0.994 - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
11. BCKDHB ENSGALG00000040702 9373 0.993 - - - - - - 0.993 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:NCBI gene;Acc:395375]
12. COL4A5 ENSGALG00000008141 15874 0.993 - - - - - - 0.993 - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
13. INPP5K ENSGALG00000002739 8120 0.993 - - - - - - 0.993 - - - inositol polyphosphate-5-phosphatase K [Source:NCBI gene;Acc:771549]
14. MRPS21 ENSGALG00000000456 35298 0.992 - - - - - - 0.992 - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
15. CTNNA1 ENSGALG00000002447 22379 0.992 - - - - - - 0.992 - - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
16. PSMD7 ENSGALG00000000707 26350 0.992 - - - - - - 0.992 - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
17. SESTD1 ENSGALG00000009031 13090 0.992 - - - - - - 0.992 - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
18. RNF11 ENSGALG00000010539 8617 0.992 - - - - - - 0.992 - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
19. FASN ENSGALG00000040896 17372 0.992 - - - - - - 0.992 - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
20. TMEM258 ENSGALG00000038292 31116 0.991 - - - - - - 0.991 - - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
21. SSB ENSGALG00000009677 25335 0.99 - - - - - - 0.990 - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
22. RALGAPA1 ENSGALG00000010088 6005 0.99 - - - - - - 0.990 - - - Ral GTPase activating protein catalytic alpha subunit 1 [Source:NCBI gene;Acc:423327]
23. HEY1 ENSGALG00000035031 8795 0.99 - - - - - - 0.990 - - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
24. CFL2 ENSGALG00000010027 16952 0.988 - - - - - - 0.988 - - - cofilin 2 [Source:NCBI gene;Acc:423320]
25. MAST4 ENSGALG00000014784 4153 0.988 - - - - - - 0.988 - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
26. RANBP3 ENSGALG00000000577 8856 0.988 - - - - - - 0.988 - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
27. RWDD2B ENSGALG00000015807 3601 0.987 - - - - - - 0.987 - - - RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
28. UFSP2 ENSGALG00000010601 5809 0.987 - - - - - - 0.987 - - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
29. XRCC3 ENSGALG00000011533 3768 0.987 - - - - - - 0.987 - - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
30. DGCR14 DGCR14 2633 0.986 - - - - - - 0.986 - - -
31. ENSGALG00000023608 ENSGALG00000023608 1538 0.986 - - - - - - 0.986 - - -
32. DNAH17 1389 0.986 - - - - - - 0.986 - - - dynein axonemal heavy chain 17, transcript variant X6
33. ACAT1 ENSGALG00000017163 6239 0.986 - - - - - - 0.986 - - - acetyl-CoA acetyltransferase 1 [Source:NCBI gene;Acc:418968]
34. CEP19 ENSGALG00000006405 1645 0.986 - - - - - - 0.986 - - - centrosomal protein 19 [Source:NCBI gene;Acc:424858]
35. ZNF385D ENSGALG00000011283 2578 0.986 - - - - - - 0.986 - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
36. GCC1 ENSGALG00000033149 1915 0.986 - - - - - - 0.986 - - - GRIP and coiled-coil domain containing 1 [Source:NCBI gene;Acc:430581]
37. H3-IX_1 H3-IX_1 54392 0.986 - - - - - - 0.986 - - -
38. MSH2 ENSGALG00000008962 9709 0.984 - - - - - - 0.984 - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
39. MAPRE1 ENSGALG00000006657 64346 0.98 - - - - - - 0.980 - - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
40. HNRNPA2B1 ENSGALG00000011036 53662 0.966 - - - - - - 0.966 - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
41. ERH ENSGALG00000017384 74926 0.932 - - - - - - 0.932 - - - ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
42. SNRNP27 ENSGALG00000013883 22212 0.898 - - - - - - - 0.898 - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
43. RNF220 ENSGALG00000010109 3114 0.885 - - - - - - - - - 0.885 ring finger protein 220 [Source:NCBI gene;Acc:424580]
44. PTCHD1 ENSGALG00000016358 3882 0.881 - - - - - - - - - 0.881 patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
45. DGKB ENSGALG00000033561 170 0.871 - - - - - - - - - 0.871 diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
46. PURH PURH 28410 0.858 - - - - - - - - - 0.858
47. RPS10 ENSGALG00000002813 541909 0.858 - - - - - - 0.858 - - - ribosomal protein S10 [Source:NCBI gene;Acc:419904]
48. PERP PERP 734 0.858 - - - - - - - - - 0.858
49. CMIP ENSGALG00000038494 5016 0.856 - - - - - - - - - 0.856 c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
50. COQ7 ENSGALG00000006861 5118 0.854 - - - - - - - - - 0.854 coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
51. INPP5B ENSGALG00000001606 458 0.853 - - - - - - - - - 0.853 inositol polyphosphate-5-phosphatase B [Source:HGNC Symbol;Acc:HGNC:6077]
52. CEP55 ENSGALG00000006639 258 0.852 - - - - - - - - - 0.852 centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]
53. PDCD4 ENSGALG00000008700 574 0.85 - - - - - - - - - 0.850 programmed cell death 4 [Source:NCBI gene;Acc:374191]
54. GLRX3 ENSGALG00000010464 22578 0.848 - - - - - - - - - 0.848 glutaredoxin 3 [Source:NCBI gene;Acc:423968]
55. ENSGALG00000000882 ENSGALG00000000882 1208 0.848 - - - - - - - - - 0.848
56. C3H20ORF94 C3H20ORF94 414 0.844 - - - - - - - - - 0.844
57. ANKRA2 ENSGALG00000013511 3460 0.84 - - - - - - - - - 0.840 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
58. gga-mir-6681 ENSGALG00000027840 546 0.84 - - - - - - - - - 0.840 gga-mir-6681 [Source:miRBase;Acc:MI0022502]
59. RFWD3 2315 0.839 - - - - - - - - - 0.839 ring finger and WD repeat domain 3
60. TXNRD2 ENSGALG00000001988 1208 0.836 - - - - - - - - - 0.836 thioredoxin reductase 2 [Source:NCBI gene;Acc:416782]
61. ZNF276 ENSGALG00000000513 2410 0.835 - - - - - - - - - 0.835 zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
62. TBC1D9 ENSGALG00000009855 658 0.835 - - - - - - - - - 0.835 TBC1 domain family member 9 [Source:HGNC Symbol;Acc:HGNC:21710]
63. SLC15A4 ENSGALG00000002695 2729 0.833 - - - - - - - - - 0.833 solute carrier family 15 member 4 [Source:HGNC Symbol;Acc:HGNC:23090]
64. PRKAB2 ENSGALG00000001678 1999 0.833 - - - - - - - - - 0.833 protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
65. SRA1 ENSGALG00000040453 266 0.832 - - - - - - - - - 0.832 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
66. C5orf24 ENSGALG00000006371 1573 0.831 - - - - - - - - - 0.831 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
67. CACNA2D2 ENSGALG00000038242 2078 0.83 - - - - - - - - - 0.830 calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
68. ZNF142 ENSGALG00000011393 2078 0.83 - - - - - - - - - 0.830 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
69. USP36 ENSGALG00000037018 783 0.829 - - - - - - - - - 0.829 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
70. SMOC1 ENSGALG00000009415 2403 0.829 - - - - - 0.829 - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
71. FTSJ3 ENSGALG00000032993 8929 0.829 - - - - - - - - - 0.829 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
72. FAM96B 14435 0.827 - - - - - - - - - 0.827 family with sequence similarity 96 member B
73. RAB34 ENSGALG00000026315 1193 0.825 - - - - - - - - - 0.825 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
74. ENSGALG00000014441 ENSGALG00000014441 1442 0.825 - - - - - - - - - 0.825
75. CTK-1 CTK-1 1618 0.825 - - - - - - - - - 0.825
76. ARIH2 ENSGALG00000006956 3692 0.824 - - - - - - - - - 0.824 ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
77. VOPP1 ENSGALG00000042773 771 0.823 - - - - - - - - - 0.823 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
78. TMEM199 ENSGALG00000023757 10781 0.821 - - - - - - - - - 0.821 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
79. VPRBP VPRBP 4037 0.821 - - - - - - - - - 0.821
80. MED18 ENSGALG00000028149 2684 0.818 - - - - - - - - - 0.818 mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
81. RGP1 ENSGALG00000002394 5937 0.818 - - - - - - - - - 0.818 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
82. TWF2 ENSGALG00000003977 6597 0.817 - - - - - - - - - 0.817 twinfilin actin binding protein 2 [Source:NCBI gene;Acc:415940]
83. CDC42 ENSGALG00000004796 59878 0.817 - - - - - - - - - 0.817 cell division cycle 42 [Source:NCBI gene;Acc:395917]
84. PSMB4 ENSGALG00000000905 46735 0.816 - - - - - - - - - 0.816 proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
85. TATDN1 ENSGALG00000041072 1585 0.816 - - - - - - - - - 0.816 TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
86. CEP57 ENSGALG00000017201 524 0.814 - - - - - - - - - 0.814 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
87. CHURC1 ENSGALG00000042309 12066 0.813 - - - - - - - - - 0.813 churchill domain containing 1 [Source:NCBI gene;Acc:395448]
88. ENSGALG00000004772 ENSGALG00000004772 173 0.813 - - - - - - - - - 0.813
89. MBD4 ENSGALG00000020747 3644 0.811 - - - - - - - - - 0.811 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
90. TBC1D32 ENSGALG00000014876 681 0.81 - - - - - - - - - 0.810 TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
91. CEPT1 ENSGALG00000000142 4219 0.81 - - - - - - - - - 0.810 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
92. ENSGALG00000008594 ENSGALG00000008594 54 0.81 - - - - - - - - - 0.810
93. DUSP23 1663 0.81 - - - - - - - - - 0.810 dual specificity phosphatase 23, transcript variant X1
94. PSMB7 ENSGALG00000001103 42683 0.809 - - - - - - - 0.809 - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
95. ANGEL1 ENSGALG00000010372 1763 0.809 - - - - - - - - - 0.809 angel homolog 1 [Source:NCBI gene;Acc:423370]
96. TCP1 ENSGALG00000011637 73216 0.809 - - - - - - - 0.809 - - t-complex 1 [Source:NCBI gene;Acc:421586]
97. PROCR ENSGALG00000006547 645 0.808 - - - - - - - - - 0.808 protein C receptor [Source:NCBI gene;Acc:424867]
98. CREG2 ENSGALG00000040947 1279 0.807 - - - - - - - - - 0.807 cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]
99. ADAMTS12 55 0.807 - - - - - - - - - 0.807 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
100. MAP3K8 ENSGALG00000007356 188 0.806 - - - - - - - - - 0.806 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]

There are 242 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA