Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRPK1

Gene Name Gene ID Reads Annotation
SRPK1 ENSGALG00000037546 1849 SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]











Genes with expression patterns similar to SRPK1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRPK1 ENSGALG00000037546 1849 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
2. ZNF142 ENSGALG00000011393 2078 1.68 - - - - - - 0.887 - - 0.793 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
3. CCDC101 CCDC101 9111 1.503 - - - - - - 0.771 - - 0.732
4. AMDHD2 ENSGALG00000009234 1730 1.462 - - 0.710 - - - - - - 0.752 Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
5. PLCE1 ENSGALG00000039528 151 0.964 - - - - - - 0.964 - - - phospholipase C epsilon 1
6. SUGP1 ENSGALG00000042132 2771 0.962 - - - - - - 0.962 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
7. SLC25A21 ENSGALG00000010117 536 0.956 - - - - - - 0.956 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
8. PGAP2 ENSGALG00000027762 2583 0.952 - - - - - - 0.952 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
9. MBNL2 ENSGALG00000016890 3162 0.947 - - - - - - 0.947 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
10. PEX6 ENSGALG00000045514 4582 0.944 - - - - - - 0.944 - - - peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
11. TM9SF4 ENSGALG00000006568 567 0.937 - - - - - - 0.937 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
12. USP54 ENSGALG00000005232 2749 0.937 - - - - - - 0.937 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
13. EFNB2 ENSGALG00000029175 5664 0.936 - - - - - - 0.936 - - - ephrin B2 [Source:NCBI gene;Acc:395625]
14. USP8 ENSGALG00000005894 4499 0.936 - - - - - - 0.936 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
15. RBL1 ENSGALG00000001332 2568 0.935 - - - - - - 0.935 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
16. PTN ENSGALG00000040493 864 0.933 - - - - - - 0.933 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
17. NSRP1 ENSGALG00000004186 1683 0.932 - - - - - - 0.932 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
18. GRB14 ENSGALG00000020703 42 0.931 - - - - - - 0.931 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
19. SMAD5 ENSGALG00000006309 1748 0.931 - - - - - - 0.931 - - - SMAD family member 5 [Source:NCBI gene;Acc:395679]
20. TCTE1 ENSGALG00000010165 65 0.931 - - - - - - 0.931 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
21. HEMK1 ENSGALG00000002253 40 0.93 - - - - - - 0.930 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
22. SCUBE1 ENSGALG00000014178 91 0.93 - - - - - - 0.930 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
23. METTL24 ENSGALG00000041120 60 0.93 - - - - - - 0.930 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
24. DIEXF ENSGALG00000009887 4782 0.929 - - - - - - 0.929 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
25. ENSGALG00000026925 ENSGALG00000026925 119 0.929 - - - - - - 0.929 - - -
26. MXRA5 ENSGALG00000016635 352 0.929 - - - - - - 0.929 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
27. ENSGALG00000003619 ENSGALG00000003619 58 0.928 - - - - - - 0.928 - - -
28. ENSGALG00000016099 ENSGALG00000016099 138 0.928 - - - - - - 0.928 - - -
29. FAM183A 242 0.927 - - - - - - 0.927 - - - family with sequence similarity 183 member A, transcript variant 2
30. HESX1 ENSGALG00000005506 203 0.927 - - - - - - 0.927 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
31. SNORA31 SNORA31 183 0.926 - - - - - - 0.926 - - -
32. DNAJC16 ENSGALG00000032832 750 0.925 - - - - - - 0.925 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
33. ENSGALG00000013233 ENSGALG00000013233 3265 0.925 - - - - - - 0.925 - - -
34. WDSUB1 ENSGALG00000012574 2038 0.924 - - - - - - 0.924 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
35. MESDC1 1013 0.921 - - - - - - 0.921 - - - mesoderm development candidate 1
36. ENTPD8L ENSGALG00000008936 731 0.921 - - - - - - 0.921 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
37. GAS6 ENSGALG00000016820 481 0.92 - - - - - - 0.920 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
38. PIK3R3 ENSGALG00000010335 374 0.92 - - - - - - 0.920 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
39. UPK3BL ENSGALG00000001885 1650 0.919 - - - - - - 0.919 - - - uroplakin 3B-like
40. CEP290 ENSGALG00000011177 1559 0.917 - - - - - - 0.917 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
41. RPIA ENSGALG00000015960 2784 0.914 - - - - - - 0.914 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
42. INTS7 ENSGALG00000009843 2395 0.914 - - - - - - 0.914 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
43. UBE3B ENSGALG00000013851 1672 0.913 - - - - - - 0.913 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
44. WDR47 ENSGALG00000002129 2624 0.912 - - - - - - 0.912 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
45. RAB1A ENSGALG00000031582 6929 0.912 - - - - - - 0.912 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
46. MBNL1 ENSGALG00000029190 3953 0.911 - - - - - - 0.911 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
47. TM2D3 ENSGALG00000026271 2566 0.91 - - - - - - 0.910 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
48. MPST ENSGALG00000040840 2122 0.909 - - - - - - 0.909 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
49. FAM193A ENSGALG00000015667 3075 0.909 - - - - - - 0.909 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
50. SGSM3 ENSGALG00000012033 1839 0.906 - - - - - - 0.906 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
51. PKN3 532 0.904 - - - - - - 0.904 - - - protein kinase N3, transcript variant X2
52. C14orf80 C14orf80 1921 0.903 - - - - - - 0.903 - - -
53. TPR ENSGALG00000005105 2924 0.902 - - - - - - 0.902 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
54. LFNG ENSGALG00000038515 5178 0.902 - - - - - - 0.902 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
55. NUP205 ENSGALG00000011662 4157 0.902 - - - - - - 0.902 - - - nucleoporin 205
56. SPG11 ENSGALG00000008180 1890 0.901 - - - - - - 0.901 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
57. FAM57A ENSGALG00000004820 1492 0.9 - - - - - - 0.900 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
58. RBM34 ENSGALG00000029915 5618 0.898 - - - - - - 0.898 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
59. ZFYVE19 ENSGALG00000008460 2750 0.898 - - - - - - 0.898 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
60. MST1 ENSGALG00000002722 994 0.898 - - - - - - 0.898 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
61. GPN3 ENSGALG00000003807 6320 0.897 - - - - - - 0.897 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
62. XPO7 ENSGALG00000001838 1875 0.897 - - - - - - 0.897 - - - exportin 7 [Source:NCBI gene;Acc:426925]
63. MORC3 ENSGALG00000036556 2976 0.897 - - - - - - 0.897 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
64. ENSGALG00000028164 ENSGALG00000028164 3325 0.895 - - - - - - 0.895 - - -
65. SCAF4 ENSGALG00000033965 2027 0.895 - - - - - - 0.895 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
66. JMJD7 ENSGALG00000026846 1320 0.894 - - - - - - 0.894 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
67. MED16 ENSGALG00000001978 2387 0.893 - - - - - - 0.893 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
68. NPHP4 ENSGALG00000000966 1698 0.89 - - - - - - 0.890 - - - nephrocystin 4, transcript variant X5
69. SPAG9 ENSGALG00000034001 2314 0.89 - - - - - - 0.890 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
70. NSMCE4A ENSGALG00000009504 1302 0.89 - - - - - - 0.890 - - - NSE4 homolog A, SMC5-SMC6 complex component
71. SDK2 ENSGALG00000031895 2682 0.89 - - - - - - 0.890 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
72. TUBA4A ENSGALG00000000433 1367 0.889 - - - - - - 0.889 - - - tubulin alpha 4a
73. HELLS ENSGALG00000005451 7094 0.887 - - - - - - 0.887 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
74. CCNL1 ENSGALG00000009699 1033 0.886 - - - - - - 0.886 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
75. NT5C2 ENSGALG00000008179 1760 0.886 - - - - - - 0.886 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
76. GPC3 ENSGALG00000006087 3744 0.884 - - - - - - 0.884 - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
77. MSL3 ENSGALG00000041433 2957 0.884 - - - - - - 0.884 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
78. ERMP1 ENSGALG00000000438 1136 0.884 - - - - - - 0.884 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
79. MGLL ENSGALG00000032736 612 0.884 - - - - - - 0.884 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
80. RNF20 ENSGALG00000015548 7199 0.883 - - - - - - 0.883 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
81. WIPI1 ENSGALG00000004215 3359 0.883 - - - - - - 0.883 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
82. CCNE2 ENSGALG00000040794 1229 0.883 - - - - - - 0.883 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
83. NCAPG2 ENSGALG00000006525 2319 0.882 - - - - - - 0.882 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
84. NIN ENSGALG00000012361 2284 0.881 - - - - - - 0.881 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
85. ASB6 ENSGALG00000004378 1080 0.881 - - - - - - 0.881 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
86. SUN1 ENSGALG00000003781 3442 0.879 - - - - - - 0.879 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
87. KANK4 ENSGALG00000010953 726 0.878 - - - - - - 0.878 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
88. PARD3B ENSGALG00000042645 2893 0.878 - - - - - - 0.878 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
89. COPS8 ENSGALG00000033385 10166 0.877 - - - - - - 0.877 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
90. HYOU1 ENSGALG00000007659 3555 0.877 - - - - - - 0.877 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
91. ATM ENSGALG00000017159 893 0.876 - - - - - - 0.876 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
92. NDUFV3 ENSGALG00000022813 4456 0.876 - - - - - - 0.876 - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:NCBI gene;Acc:418541]
93. GAS2 ENSGALG00000003655 2672 0.873 - - - - - - 0.873 - - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
94. BPHL ENSGALG00000029659 501 0.873 - - - - - - 0.873 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
95. SCLT1 2397 0.872 - - - - - - 0.872 - - - sodium channel and clathrin linker 1, transcript variant X6
96. EIF3I ENSGALG00000003337 28832 0.872 - - - - - - 0.872 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
97. TAF8 ENSGALG00000003498 2071 0.872 - - - - - - 0.872 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
98. RFT1 ENSGALG00000001945 2446 0.871 - - - - - - 0.871 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
99. LIMCH1 ENSGALG00000014258 1987 0.87 - - - - - - 0.870 - - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
100. IFT74 ENSGALG00000001801 1932 0.869 - - - - - - 0.869 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]

There are 375 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA