Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SRP9

Gene Name Gene ID Reads Annotation
SRP9 ENSGALG00000026009 12418 signal recognition particle 9 [Source:NCBI gene;Acc:770243]











Genes with expression patterns similar to SRP9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRP9 ENSGALG00000026009 12418 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal recognition particle 9 [Source:NCBI gene;Acc:770243]
2. MRPL28 ENSGALG00000007473 19134 1.731 - - - - - - 0.764 0.967 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
3. UBE2J2 ENSGALG00000001848 6527 1.7 - - - - - - 0.731 0.969 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
4. TNRC6A ENSGALG00000006068 9166 1.645 - - - - - - 0.710 0.935 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
5. HIPK3 ENSGALG00000011695 6842 1.643 - - - - - - 0.712 0.931 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
6. ENSGALG00000007574 ENSGALG00000007574 7695 1.59 - - - - - - 0.752 0.838 - -
7. GLRX3 ENSGALG00000010464 22578 1.575 - - - - - - 0.803 0.772 - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
8. CSK ENSGALG00000031270 11541 1.572 - - - - - - 0.763 0.809 - - C-terminal Src kinase [Source:NCBI gene;Acc:396396]
9. PSMD12 ENSGALG00000026225 17473 1.568 - - - - - - 0.843 0.725 - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
10. ATP2B1 ENSGALG00000030550 15123 1.504 - - - - - - 0.712 0.792 - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
11. HSPA4 ENSGALG00000040882 20966 1.454 - - - - - - 0.733 0.721 - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
12. TAF12 ENSGALG00000000991 8709 0.979 - - - - - - - 0.979 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
13. TCEA2 ENSGALG00000005976 9143 0.975 - - - - - - - 0.975 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
14. TARS ENSGALG00000003288 12702 0.972 - - - - - - - 0.972 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
15. DLGAP4 ENSGALG00000001046 6872 0.97 - - - - - - - 0.970 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
16. LUC7L3 ENSGALG00000007386 11944 0.969 - - - - - - - 0.969 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
17. MAP4K5 ENSGALG00000012321 3036 0.968 - - - - - - - 0.968 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
18. POLDIP2 ENSGALG00000003211 11664 0.967 - - - - - - - 0.967 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
19. VPS26A ENSGALG00000004174 9198 0.967 - - - - - - - 0.967 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
20. FNTA ENSGALG00000015397 3741 0.966 - - - - - - - 0.966 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
21. CABLES1 ENSGALG00000014998 1636 0.966 - - - - - - - 0.966 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
22. EMC1 ENSGALG00000003969 6876 0.966 - - - - - - - 0.966 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
23. METTL6 ENSGALG00000040665 4467 0.966 - - - - - - - 0.966 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
24. CHST2 ENSGALG00000034507 6172 0.965 - - - - - - - 0.965 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
25. UTP23 ENSGALG00000032400 3601 0.965 - - - - - - - 0.965 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
26. UBE2Q2 3861 0.965 - - - - - - - 0.965 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
27. ITCH ENSGALG00000040474 2646 0.964 - - - - - - - 0.964 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
28. WDR45B ENSGALG00000001563 5870 0.964 - - - - - - - 0.964 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
29. MRPL10 ENSGALG00000014387 12386 0.963 - - - - - - - 0.963 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
30. WDR82 ENSGALG00000025904 4783 0.963 - - - - - - - 0.963 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
31. PAM16 9684 0.963 - - - - - - - 0.963 - - presequence translocase associated motor 16 homolog, transcript variant X2
32. FGD3 ENSGALG00000005237 4410 0.962 - - - - - - - 0.962 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
33. C2CD2 ENSGALG00000016148 2734 0.962 - - - - - - - 0.962 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
34. AKR1B10L3 ENSGALG00000019284 5869 0.962 - - - - - - - 0.962 - - aldo-keto reductase family 1 member B10-like 3
35. POLR2C ENSGALG00000001168 10703 0.961 - - - - - - - 0.961 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
36. TLN2 2295 0.961 - - - - - - - 0.961 - - talin 2, transcript variant X5
37. RABL5 RABL5 5264 0.959 - - - - - - - 0.959 - -
38. SRPK2 ENSGALG00000008154 7385 0.959 - - - - - - - 0.959 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
39. AARSD1 ENSGALG00000002880 3068 0.959 - - - - - - - 0.959 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
40. C1orf21 ENSGALG00000020922 4035 0.958 - - - - - - - 0.958 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
41. CDC73 ENSGALG00000002469 4586 0.957 - - - - - - - 0.957 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
42. C5orf63 C5orf63 3718 0.957 - - - - - - - 0.957 - -
43. CTSA ENSGALG00000006876 5380 0.956 - - - - - - - 0.956 - - cathepsin A [Source:NCBI gene;Acc:428163]
44. ENSGALG00000005615 ENSGALG00000005615 4354 0.956 - - - - - - - 0.956 - -
45. KPNA4 ENSGALG00000009549 3674 0.955 - - - - - - - 0.955 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
46. TBCE ENSGALG00000013950 3076 0.955 - - - - - - - 0.955 - - tubulin folding cofactor E
47. SEMA3F ENSGALG00000029621 2079 0.954 - - - - - - - 0.954 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
48. CAPRIN2 1473 0.954 - - - - - - - 0.954 - - caprin family member 2, transcript variant X7
49. HVCN1 ENSGALG00000004562 2550 0.954 - - - - - - - 0.954 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
50. SETD2 ENSGALG00000042051 2981 0.953 - - - - - - - 0.953 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
51. LIPA ENSGALG00000006378 4414 0.953 - - - - - - - 0.953 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
52. GNE ENSGALG00000015331 1577 0.953 - - - - - - - 0.953 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
53. EXOSC1 ENSGALG00000039917 5259 0.952 - - - - - - - 0.952 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
54. HIP1R ENSGALG00000031511 1981 0.952 - - - - - - - 0.952 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
55. GNB1L ENSGALG00000001925 1981 0.951 - - - - - - - 0.951 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
56. HMOX1 ENSGALG00000012550 1186 0.951 - - - - - - - 0.951 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
57. VASH1 ENSGALG00000043036 1235 0.95 - - - - - - - 0.950 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
58. FGD5 ENSGALG00000008546 4031 0.95 - - - - - - - 0.950 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
59. FTSJ2 FTSJ2 2951 0.95 - - - - - - - 0.950 - -
60. ENSGALG00000001591 ENSGALG00000001591 784 0.95 - - - - - - - 0.950 - -
61. PLA2G7 ENSGALG00000016713 2100 0.949 - - - - - - - 0.949 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
62. NR3C2 ENSGALG00000010035 603 0.949 - - - - - - - 0.949 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
63. MOB4 ENSGALG00000008128 10322 0.948 - - - - - - - 0.948 - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
64. WNK2 ENSGALG00000038850 4712 0.948 - - - - - - - 0.948 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
65. SLX4 ENSGALG00000031841 1208 0.947 - - - - - - - 0.947 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
66. RASGEF1B 2014 0.946 - - - - - - - 0.946 - - RasGEF domain family member 1B, transcript variant X8
67. ASPM ENSGALG00000032398 12784 0.946 - - - - - - - 0.946 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
68. PHF20L1 ENSGALG00000033205 7598 0.945 - - - - - - - 0.945 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
69. CXorf23 1582 0.945 - - - - - - - 0.945 - - chromosome X open reading frame 23, transcript variant X3
70. NCS1 ENSGALG00000012710 1104 0.943 - - - - - - - 0.943 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
71. FPGT ENSGALG00000026958 788 0.943 - - - - - - - 0.943 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
72. SLC26A8 ENSGALG00000040498 253 0.942 - - - - - - - 0.942 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
73. TOR1B TOR1B 197 0.941 - - - - - - - 0.941 - -
74. YTHDF3 ENSGALG00000039774 170 0.941 - - - - - - - 0.941 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
75. NKX-6.2 NKX-6.2 1370 0.941 - - - - - - - 0.941 - -
76. CAPN9 158 0.94 - - - - - - - 0.940 - - calpain 9
77. LOC420160 ENSGALG00000004252 188 0.94 - - - - - - - 0.940 - - cathepsin L1-like, transcript variant X3
78. APPBP2 ENSGALG00000005314 6447 0.936 - - - - - - - 0.936 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
79. TYW3 ENSGALG00000032549 4869 0.935 - - - - - - - 0.935 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
80. CPEB2 ENSGALG00000014516 1187 0.934 - - - - - - - 0.934 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
81. C10orf11 C10orf11 3087 0.926 - - - - - - - 0.926 - -
82. CCT8 ENSGALG00000015821 12161 0.923 - - - - - - - 0.923 - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
83. RALBP1 ENSGALG00000008405 13780 0.922 - - - - - - - 0.922 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
84. MBNL2 ENSGALG00000016890 3162 0.922 - - - - - - - 0.922 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
85. ENSGALG00000020092 ENSGALG00000020092 3067 0.919 - - - - - - - 0.919 - -
86. PCDH1 ENSGALG00000002553 2938 0.918 - - - - - - - 0.918 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
87. NPEPL1 ENSGALG00000007533 5908 0.916 - - - - - - - 0.916 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
88. CDC20 ENSGALG00000009971 11197 0.891 - - - - - - 0.891 - - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
89. THOC2 ENSGALG00000008507 9501 0.878 - - - - - - - 0.878 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
90. ENSGALG00000000360 ENSGALG00000000360 15320 0.877 - - - - - - - 0.877 - -
91. NPM3 ENSGALG00000032329 21138 0.868 - - - - - - - 0.868 - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
92. HSDL2 ENSGALG00000015663 8966 0.867 - - - - - - 0.867 - - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
93. RAP1A ENSGALG00000001476 5287 0.865 - - - - - - - 0.865 - - RAP1A, member of RAS oncogene family
94. CCAR1 ENSGALG00000004108 13219 0.862 - - - - - - - 0.862 - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
95. HAT1 ENSGALG00000009525 24864 0.861 - - - - - - - 0.861 - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
96. COX16 ENSGALG00000020449 5959 0.859 - - - - - - - 0.859 - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
97. WDR61 ENSGALG00000003221 11352 0.857 - - - - - - 0.857 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
98. CIAPIN1 ENSGALG00000029268 23036 0.855 - - - - - - 0.855 - - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
99. CLINT1 ENSGALG00000003702 11269 0.851 - - - - - - - 0.851 - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
100. ZNF451 ENSGALG00000016282 3380 0.849 - - - - - - - 0.849 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]

There are 353 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA