Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRP54

Gene Name Gene ID Reads Annotation
SRP54 ENSGALG00000023135 372 signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]











Genes with expression patterns similar to SRP54

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRP54 ENSGALG00000023135 372 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
2. CNR1 ENSGALG00000037511 38 1.638 - - 0.780 - 0.858 - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
3. STK40 ENSGALG00000032925 340 1.499 - - - - 0.733 - - - - 0.766 serine/threonine kinase 40 [Source:NCBI gene;Acc:395120]
4. CFD ENSGALG00000040832 222 1.448 - - 0.734 - - - - - - 0.714 complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
5. RAB37 ENSGALG00000027789 17 0.929 - - - - 0.929 - - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
6. PRKAR2B ENSGALG00000008060 40 0.914 - - - - 0.914 - - - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
7. gga-mir-99a ENSGALG00000018242 192 0.914 - - - - 0.914 - - - - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
8. TRIM14 ENSGALG00000015315 22 0.914 - - - - 0.914 - - - - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
9. THRB ENSGALG00000011294 7 0.914 - - - - 0.914 - - - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
10. IL22RA1 ENSGALG00000004221 71 0.914 - - - - 0.914 - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
11. ZNFX1 ENSGALG00000004859 33 0.909 - - - - 0.909 - - - - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
12. SLCO1B1 ENSGALG00000019276 7 0.908 - - - - 0.908 - - - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
13. MAL2 ENSGALG00000040768 75 0.907 - - - - 0.907 - - - - - mal, T cell differentiation protein 2 [Source:NCBI gene;Acc:420280]
14. LDHD ENSGALG00000023828 60 0.905 - - - - 0.905 - - - - - lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
15. ENSGALG00000027427 ENSGALG00000027427 16 0.897 - - - - 0.897 - - - - -
16. SLC24A2 ENSGALG00000015080 54 0.889 - - - - 0.889 - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
17. MALSU1 ENSGALG00000010954 51 0.889 - - - - 0.889 - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
18. SCUBE1 ENSGALG00000014178 91 0.881 - - - - 0.881 - - - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
19. CEP170B ENSGALG00000011639 71 0.879 - - - - 0.879 - - - - - centrosomal protein 170B, transcript variant X13
20. MIPOL1 ENSGALG00000010118 69 0.876 - - 0.876 - - - - - - - mirror-image polydactyly 1 [Source:HGNC Symbol;Acc:HGNC:21460]
21. ENSGALG00000005433 ENSGALG00000005433 55 0.875 - - - - 0.875 - - - - -
22. LOC100857745 ENSGALG00000027114 118 0.872 - - - - 0.872 - - - - - collagen alpha-1(I) chain-like
23. CP49 CP49 113 0.859 - - - - 0.859 - - - - -
24. LOC770405 ENSGALG00000013105 25 0.857 - - - - 0.857 - - - - - SUN domain-containing protein 3-like, transcript variant X2
25. GGH ENSGALG00000031130 40 0.855 - - 0.855 - - - - - - - gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]
26. MBLAC2 ENSGALG00000014649 16 0.852 - - 0.852 - - - - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
27. WARS ENSGALG00000011228 193 0.845 - - - - 0.845 - - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
28. HHLA2 ENSGALG00000022871 19 0.844 - - - - 0.844 - - - - - HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
29. SLC45A3 ENSGALG00000000703 85 0.841 - - - - 0.841 - - - - - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
30. FANCA ENSGALG00000000516 250 0.836 - - 0.836 - - - - - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
31. PKP2 ENSGALG00000012913 2547 0.834 - - - - 0.834 - - - - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
32. ANAPC1 ENSGALG00000008254 2519 0.833 - - 0.833 - - - - - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
33. SEPN1 SEPN1 58 0.831 - - - - 0.831 - - - - -
34. KIAA1549L ENSGALG00000012020 33 0.831 - - - - 0.831 - - - - - KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
35. WNT7B ENSGALG00000036255 3343 0.83 - - - - 0.830 - - - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
36. NUB1 ENSGALG00000006181 269 0.826 - - - - - - - - - 0.826 negative regulator of ubiquitin like proteins 1 [Source:NCBI gene;Acc:420433]
37. CDK14 ENSGALG00000009062 995 0.826 - - - - 0.826 - - - - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
38. ENSGALG00000023655 ENSGALG00000023655 133 0.821 - - 0.821 - - - - - - -
39. SLP76 SLP76 84 0.82 - - 0.820 - - - - - - -
40. APPL1 ENSGALG00000005527 104 0.819 - - 0.819 - - - - - - - adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 [Source:HGNC Symbol;Acc:HGNC:24035]
41. NMRK2 ENSGALG00000025751 57 0.818 - - 0.818 - - - - - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
42. AK2 ENSGALG00000003597 1415 0.817 - - - - 0.817 - - - - - adenylate kinase 2 [Source:HGNC Symbol;Acc:HGNC:362]
43. HIRA ENSGALG00000033598 296 0.816 - - - - - - - - - 0.816 histone cell cycle regulator [Source:NCBI gene;Acc:374074]
44. SERPINC1 ENSGALG00000004591 68 0.814 - - - - 0.814 - - - - - Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
45. ENSGALG00000003611 ENSGALG00000003611 22 0.813 - - - - 0.813 - - - - -
46. EX-FABP EX-FABP 516 0.813 - - 0.813 - - - - - - -
47. ENSGALG00000020349 ENSGALG00000020349 10 0.813 - - 0.813 - - - - - - -
48. TNS3 ENSGALG00000039139 63 0.813 - - 0.813 - - - - - - - tensin 3 [Source:NCBI gene;Acc:420792]
49. SH3PXD2A ENSGALG00000008293 243 0.812 - - 0.812 - - - - - - - SH3 and PX domains 2A [Source:HGNC Symbol;Acc:HGNC:23664]
50. ST6GAL2 ENSGALG00000016803 24 0.812 - - 0.812 - - - - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
51. OSBP2 ENSGALG00000007758 331 0.81 - - 0.810 - - - - - - - oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]
52. EPHX1 ENSGALG00000009291 46 0.808 - - 0.808 - - - - - - - epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]
53. IGSF6 ENSGALG00000007059 25 0.808 - - 0.808 - - - - - - - immunoglobulin superfamily member 6 [Source:NCBI gene;Acc:771906]
54. RAP2A ENSGALG00000016889 26 0.807 - - 0.807 - - - - - - - RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
55. TAF5L ENSGALG00000011098 17 0.806 - - 0.806 - - - - - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
56. OR11A1 ENSGALG00000041229 9 0.806 - - 0.806 - - - - - - - olfactory receptor family 11 subfamily A member 1
57. TLR5 ENSGALG00000009392 28 0.806 - - 0.806 - - - - - - - toll like receptor 5 [Source:NCBI gene;Acc:554217]
58. INPP5J ENSGALG00000023266 6 0.806 - - 0.806 - - - - - - - inositol polyphosphate-5-phosphatase J [Source:HGNC Symbol;Acc:HGNC:8956]
59. AIM1 51 0.806 - - 0.806 - - - - - - - absent in melanoma 1, transcript variant X2
60. ENSGALG00000007855 ENSGALG00000007855 7 0.806 - - 0.806 - - - - - - -
61. JMJD4 ENSGALG00000005417 10 0.806 - - 0.806 - - - - - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
62. TMIE 6 0.806 - - 0.806 - - - - - - - transmembrane inner ear
63. TRAIL-LIKE ENSGALG00000007240 8 0.806 - - 0.806 - - - - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
64. ENSGALG00000003796 ENSGALG00000003796 7 0.806 - - 0.806 - - - - - - -
65. EFHC1 ENSGALG00000016674 14 0.806 - - 0.806 - - - - - - - EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16406]
66. SENP5 ENSGALG00000008545 909 0.805 - - - - - - - - - 0.805 SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
67. TMCO4 ENSGALG00000004081 31 0.805 - - 0.805 - - - - - - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
68. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 0.804 - - 0.804 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
69. KCNC1 ENSGALG00000006220 15 0.804 - - 0.804 - - - - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
70. DRD2 ENSGALG00000007794 399 0.804 - - 0.804 - - - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
71. GNPTG ENSGALG00000006441 50 0.802 - - 0.802 - - - - - - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
72. FABP6 ENSGALG00000001445 1254 0.8 - - - - - - - - - 0.800 fatty acid binding protein 6 [Source:NCBI gene;Acc:416154]
73. SPATA2 ENSGALG00000008026 2040 0.799 - - 0.799 - - - - - - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
74. GATM ENSGALG00000023435 102 0.799 - - - - 0.799 - - - - - glycine amidinotransferase [Source:NCBI gene;Acc:395504]
75. MME ENSGALG00000010331 757 0.799 - - - - 0.799 - - - - - membrane metalloendopeptidase [Source:NCBI gene;Acc:425031]
76. LRP6 ENSGALG00000031503 39 0.799 - - 0.799 - - - - - - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
77. TMEM51 ENSGALG00000035819 83 0.799 - - - - 0.799 - - - - - transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]
78. ARHGDIG ENSGALG00000036819 18 0.799 - - 0.799 - - - - - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
79. MMP13 ENSGALG00000017183 7 0.798 - - 0.798 - - - - - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
80. SACM1L ENSGALG00000040902 70 0.798 - - 0.798 - - - - - - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
81. GALNT2 ENSGALG00000011106 167 0.798 - - 0.798 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
82. ZNF385C ENSGALG00000003403 9 0.798 - - 0.798 - - - - - - - zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
83. CCBL2 CCBL2 184 0.797 - - 0.797 - - - - - - -
84. C12orf29 ENSGALG00000011168 26 0.797 - - - - - - 0.797 - - - chromosome 12 open reading frame 29 [Source:HGNC Symbol;Acc:HGNC:25322]
85. ARF1 ENSGALG00000005393 364 0.797 - - - - - - 0.797 - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
86. UROS ENSGALG00000013688 10 0.796 - - 0.796 - - - - - - - uroporphyrinogen III synthase [Source:HGNC Symbol;Acc:HGNC:12592]
87. SLC2A1 ENSGALG00000004889 10 0.795 - - 0.795 - - - - - - - solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
88. ISOC1 ENSGALG00000000161 46 0.795 - - 0.795 - - - - - - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
89. TARS2 ENSGALG00000043416 179 0.792 - - - - 0.792 - - - - - threonyl-tRNA synthetase 2, mitochondrial (putative)
90. SLC30A9 ENSGALG00000031415 36 0.791 - - 0.791 - - - - - - - solute carrier family 30 member 9
91. SPOCK3 ENSGALG00000009568 33 0.791 - - 0.791 - - - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
92. AHCYL1 ENSGALG00000000329 866 0.79 - - 0.790 - - - - - - - adenosylhomocysteinase like 1 [Source:NCBI gene;Acc:419803]
93. STAB1 21 0.789 - - 0.789 - - - - - - - stabilin 1, transcript variant X2
94. WDR37 ENSGALG00000006749 44 0.788 - - 0.788 - - - - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
95. C10ORF57 C10ORF57 249 0.788 - - 0.788 - - - - - - -
96. ZNF438 ENSGALG00000007266 26 0.788 - - 0.788 - - - - - - - zinc finger protein 438 [Source:HGNC Symbol;Acc:HGNC:21029]
97. ENSGALG00000022661 ENSGALG00000022661 9 0.787 - - - - 0.787 - - - - -
98. IQSEC1 ENSGALG00000005042 24 0.786 - - 0.786 - - - - - - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
99. ALS2CL ENSGALG00000005430 161 0.785 - - 0.785 - - - - - - - ALS2 C-terminal like [Source:HGNC Symbol;Acc:HGNC:20605]
100. PPL ENSGALG00000002201 13 0.784 - - 0.784 - - - - - - - periplakin

There are 149 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA