Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SRP19

Gene Name Gene ID Reads Annotation
SRP19 ENSGALG00000000218 14207 signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]











Genes with expression patterns similar to SRP19

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRP19 ENSGALG00000000218 14207 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
2. NUP88 ENSGALG00000032280 9847 1.814 - - - - 0.960 - - 0.854 - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
3. ASAP2 ENSGALG00000016419 1393 1.732 - - - - 0.953 - 0.779 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
4. CCDC132 CCDC132 2632 1.719 - - - - 0.958 - 0.761 - - -
5. RPL22 ENSGALG00000000719 74238 1.718 - - - - 0.944 - 0.774 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
6. RSRC2 ENSGALG00000004493 9008 1.705 - - - - - - 0.846 0.859 - - arginine and serine rich coiled-coil 2 [Source:NCBI gene;Acc:416864]
7. DNAJC9 ENSGALG00000002701 19249 1.705 - - - - 0.950 - 0.755 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
8. C9orf85 ENSGALG00000026001 4110 1.697 - - - - 0.954 - 0.743 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
9. TMEM33 ENSGALG00000014248 6069 1.688 - - - - - - 0.811 0.877 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
10. RHOT1 ENSGALG00000003397 5149 1.676 - - - - 0.958 - 0.718 - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
11. ATXN2 ENSGALG00000004625 6306 1.664 - - - - - - 0.846 0.818 - - ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]
12. SREK1 ENSGALG00000014775 13961 1.659 - - - - 0.892 - 0.767 - - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
13. ZC3H6 ENSGALG00000008269 10353 1.657 - - - - 0.935 - 0.722 - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
14. G3BP1 ENSGALG00000004160 36795 1.655 - - - - 0.892 - 0.763 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
15. Mar-05 Mar-05 6330 1.644 - - - - 0.938 - 0.706 - - -
16. SERINC1 ENSGALG00000014868 12484 1.642 - - - - - - 0.742 0.900 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
17. SEMA6D ENSGALG00000030542 3780 1.641 - - - - - - 0.818 0.823 - - semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
18. ELOVL5 ENSGALG00000016314 18163 1.637 - - - - 0.842 - 0.795 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
19. DKK3 ENSGALG00000005551 7807 1.635 - - - - 0.906 - 0.729 - - - dickkopf WNT signaling pathway inhibitor 3 [Source:NCBI gene;Acc:396023]
20. ENSGALG00000014375 ENSGALG00000014375 4741 1.627 - - - - - - 0.739 0.888 - -
21. MAD2L1 ENSGALG00000011967 16125 1.624 - - - - 0.823 - - 0.801 - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
22. CNEP1R1 ENSGALG00000029793 6536 1.623 - - - - - - 0.724 0.899 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
23. CHMP2B ENSGALG00000015496 3973 1.589 - - - - - - 0.715 0.874 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
24. OSBPL1A ENSGALG00000015086 2702 1.571 - - - - - - 0.743 0.828 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
25. TAF1B ENSGALG00000016437 2318 1.56 - - - - - - 0.745 0.815 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
26. CHTF18 ENSGALG00000040157 2140 1.547 - - - - - - 0.775 0.772 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
27. DCUN1D2 ENSGALG00000029145 2414 1.541 - - - - - - 0.764 0.777 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
28. NAPEPLD ENSGALG00000008285 1295 1.541 - - - - - - 0.726 0.815 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
29. TMEM123 ENSGALG00000017185 6798 1.416 - - - - - - 0.711 0.705 - - transmembrane protein 123 [Source:NCBI gene;Acc:418984]
30. DENR ENSGALG00000003795 30805 0.966 - - - - 0.966 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
31. LGALS1 ENSGALG00000012420 13993 0.965 - - - - 0.965 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
32. NEK6 ENSGALG00000001118 20333 0.965 - - - - 0.965 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
33. PSMG3 ENSGALG00000004203 11240 0.964 - - - - 0.964 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
34. MRPL16 ENSGALG00000029419 8033 0.963 - - - - 0.963 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
35. ENSGALG00000027854 ENSGALG00000027854 5007 0.962 - - - - 0.962 - - - - -
36. PHTF1 ENSGALG00000001845 3276 0.962 - - - - 0.962 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
37. UTP6 ENSGALG00000003260 4909 0.962 - - - - 0.962 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
38. COQ5 ENSGALG00000007185 5614 0.961 - - - - 0.961 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
39. LOC426385 ENSGALG00000026301 2703 0.961 - - - - 0.961 - - - - - serine/threonine kinase 35-like, transcript variant X2
40. IARS2 ENSGALG00000009566 4599 0.961 - - - - 0.961 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
41. FNDC5 ENSGALG00000003567 3328 0.96 - - - - 0.960 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
42. KIF11 ENSGALG00000030597 5528 0.96 - - - - 0.960 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
43. ETS1 ENSGALG00000001143 7284 0.959 - - - - 0.959 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
44. DLD ENSGALG00000007931 11011 0.959 - - - - 0.959 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
45. LZIC ENSGALG00000002616 9052 0.959 - - - - 0.959 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
46. SYNE1 ENSGALG00000013505 2324 0.958 - - - - 0.958 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
47. CDKN1B ENSGALG00000022980 4606 0.958 - - - - 0.958 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
48. PSMD3 ENSGALG00000033162 25615 0.958 - - - - 0.958 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
49. ANKRD9 ENSGALG00000011376 525 0.957 - - - - 0.957 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
50. MYO9A ENSGALG00000033618 4505 0.957 - - - - 0.957 - - - - - myosin IXA, transcript variant X10
51. STARD3NL ENSGALG00000033038 4851 0.957 - - - - 0.957 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
52. MED8 ENSGALG00000009993 3095 0.957 - - - - 0.957 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
53. SFXN5 ENSGALG00000016094 2678 0.957 - - - - 0.957 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
54. ACAT2 ENSGALG00000011659 12825 0.956 - - - - 0.956 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
55. SLMO2 SLMO2 9207 0.956 - - - - 0.956 - - - - -
56. NDUFV1 ENSGALG00000042809 6222 0.956 - - - - 0.956 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
57. BAHD1 ENSGALG00000033675 1779 0.956 - - - - 0.956 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
58. CDCA7 ENSGALG00000040833 7484 0.956 - - - - 0.956 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
59. RBM34 ENSGALG00000029915 5618 0.956 - - - - 0.956 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
60. BRF1 ENSGALG00000011705 3406 0.956 - - - - 0.956 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
61. MYBL2 ENSGALG00000003503 15875 0.956 - - - - 0.956 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
62. RBM6 ENSGALG00000035578 1690 0.956 - - - - 0.956 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
63. HARS ENSGALG00000035080 11602 0.956 - - - - 0.956 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
64. PREP2 PREP2 238 0.955 - - - - 0.955 - - - - -
65. WDR92 ENSGALG00000008760 3934 0.955 - - - - 0.955 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
66. UPF3B ENSGALG00000008618 12350 0.955 - - - - 0.955 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
67. GTF2H1 ENSGALG00000042340 1553 0.955 - - - - 0.955 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
68. RALGDS ENSGALG00000003412 4478 0.955 - - - - 0.955 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
69. SMG7 ENSGALG00000004667 707 0.955 - - - - 0.955 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
70. RAMP3 ENSGALG00000037246 1187 0.955 - - - - 0.955 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
71. SDCBP ENSGALG00000015436 1228 0.955 - - - - 0.955 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
72. SNX14 ENSGALG00000015831 2554 0.954 - - - - 0.954 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
73. YARS ENSGALG00000003563 11093 0.954 - - - - 0.954 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
74. PBRM1 ENSGALG00000037455 6450 0.954 - - - - 0.954 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
75. NDUFS4 ENSGALG00000028026 25876 0.954 - - - - 0.954 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
76. PITHD1 ENSGALG00000003986 11470 0.953 - - - - 0.953 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
77. PTK2B ENSGALG00000016564 406 0.953 - - - - 0.953 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
78. HSF2 ENSGALG00000038420 5259 0.953 - - - - 0.953 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
79. RAD54B ENSGALG00000043597 1699 0.953 - - - - 0.953 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
80. SAP30 ENSGALG00000036252 2032 0.953 - - - - 0.953 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
81. PRDM4 ENSGALG00000012619 876 0.952 - - - - 0.952 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
82. LMAN2 ENSGALG00000033232 11740 0.952 - - - - 0.952 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
83. FUNDC2 ENSGALG00000029585 9334 0.951 - - - - 0.951 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
84. CDH3 5050 0.951 - - - - 0.951 - - - - - cadherin 3
85. HDAC8 ENSGALG00000004825 12066 0.951 - - - - 0.951 - - - - - histone deacetylase 8, transcript variant X2
86. MEF2BNB MEF2BNB 5578 0.951 - - - - 0.951 - - - - -
87. ENSGALG00000006569 ENSGALG00000006569 2169 0.951 - - - - 0.951 - - - - -
88. TSPO2 ENSGALG00000003212 5141 0.951 - - - - 0.951 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
89. LGMN ENSGALG00000010811 7401 0.95 - - - - 0.950 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
90. SH3BGR ENSGALG00000016127 2561 0.95 - - - - 0.950 - - - - - SH3 domain binding glutamate rich protein
91. MARC1 ENSGALG00000009453 5675 0.949 - - - - 0.949 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
92. MED21 ENSGALG00000027435 5766 0.949 - - - - 0.949 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
93. PRCC ENSGALG00000040696 9346 0.949 - - - - 0.949 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
94. TIMMDC1 ENSGALG00000024480 9337 0.948 - - - - 0.948 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
95. DGKZ ENSGALG00000008380 5389 0.948 - - - - 0.948 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
96. WNK2 ENSGALG00000038850 4712 0.948 - - - - 0.948 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
97. TMF1 ENSGALG00000013408 3344 0.948 - - - - 0.948 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
98. DLL1 ENSGALG00000011182 1613 0.947 - - - - 0.947 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
99. EDNRA ENSGALG00000010013 2472 0.947 - - - - 0.947 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
100. ZDHHC6 ENSGALG00000008870 16575 0.946 - - - - 0.946 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]

There are 535 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA