Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRM

Gene Name Gene ID Reads Annotation
SRM ENSG00000116649 8533 spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]



Genes with expression patterns similar to SRM

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SRM ENSG00000116649 8533 2 1.000 1.000 spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
2. CBS ENSG00000160200 15678 0.825 - 0.825 cystathionine-beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
3. AURKB ENSG00000178999 25157 0.824 - 0.824 aurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]
4. FASN ENSG00000169710 19582 0.819 - 0.819 fatty acid synthase [Source:HGNC Symbol;Acc:HGNC:3594]
5. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 314035 0.813 - 0.813 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
6. ATP5SL 25967 0.81 - 0.810 ATP5S like, transcript variant X1
7. TRIM28 ENSG00000130726 33518 0.8 - 0.800 tripartite motif containing 28 [Source:HGNC Symbol;Acc:HGNC:16384]
8. USP11 ENSG00000102226 8177 0.797 - 0.797 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]
9. ENO1 ENSG00000074800 57728 0.794 - 0.794 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
10. PPME1 ENSG00000214517 4946 0.792 - 0.792 protein phosphatase methylesterase 1 [Source:HGNC Symbol;Acc:HGNC:30178]
11. MED24 ENSG00000008838 7251 0.79 - 0.790 mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]
12. CUTA ENSG00000112514, ENSG00000226492 17547 0.787 - 0.787 cutA divalent cation tolerance homolog [Source:HGNC Symbol;Acc:HGNC:21101]
13. EHMT2 ENSG00000204371, ENSG00000206376, ENSG00000224143, ENSG00000227333, ENSG00000232045, ENSG00000236759, ENSG00000238134 6990 0.784 - 0.784 euchromatic histone lysine methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:14129]
14. POLR2E ENSG00000099817 7529 0.781 - 0.781 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
15. DNMT1 ENSG00000130816 23001 0.781 - 0.781 DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]
16. DCTN1 ENSG00000204843 19815 0.781 - 0.781 dynactin subunit 1 [Source:HGNC Symbol;Acc:HGNC:2711]
17. TPI1 ENSG00000111669 19510 0.781 - 0.781 triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:12009]
18. HN1 33065 0.78 - 0.780 hematological and neurological expressed 1, transcript variant 7
19. OLMALINC ENSG00000235823 4999 0.779 - 0.779 oligodendrocyte maturation-associated long intergenic non-coding RNA [Source:HGNC Symbol;Acc:HGNC:28060]
20. EEF2 ENSG00000167658 47680 0.779 - 0.779 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
21. PDAP1 ENSG00000106244 8971 0.776 - 0.776 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
22. PKM ENSG00000067225 58854 0.774 - 0.774 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
23. FARSA ENSG00000179115 9055 0.773 - 0.773 phenylalanyl-tRNA synthetase subunit alpha [Source:HGNC Symbol;Acc:HGNC:3592]
24. FUS ENSG00000089280 23952 0.773 - 0.773 FUS RNA binding protein [Source:HGNC Symbol;Acc:HGNC:4010]
25. CTDNEP1 ENSG00000175826 15483 0.771 - 0.771 CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:19085]
26. PSME3 ENSG00000131467 10433 0.771 - 0.771 proteasome activator subunit 3 [Source:HGNC Symbol;Acc:HGNC:9570]
27. U2AF2 ENSG00000063244 19476 0.77 - 0.770 U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:HGNC:23156]
28. TUBA1C ENSG00000167553 11023 0.769 - 0.769 tubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]
29. SLC25A1 ENSG00000100075 6981 0.768 - 0.768 solute carrier family 25 member 1 [Source:HGNC Symbol;Acc:HGNC:10979]
30. GPS2 ENSG00000132522 22685 0.767 - 0.767 G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:HGNC:4550]
31. CARM1 ENSG00000142453 4208 0.767 - 0.767 coactivator associated arginine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23393]
32. CDK16 ENSG00000102225 4372 0.764 - 0.764 cyclin dependent kinase 16 [Source:HGNC Symbol;Acc:HGNC:8749]
33. ACTR1A ENSG00000138107 7033 0.762 - 0.762 ARP1 actin related protein 1 homolog A [Source:HGNC Symbol;Acc:HGNC:167]
34. HDGF ENSG00000143321 18626 0.762 - 0.762 heparin binding growth factor [Source:HGNC Symbol;Acc:HGNC:4856]
35. SRSF2 ENSG00000161547 77112 0.761 - 0.761 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
36. TBCB ENSG00000105254 27421 0.756 - 0.756 tubulin folding cofactor B [Source:HGNC Symbol;Acc:HGNC:1989]
37. NNAT ENSG00000053438 98856 0.755 - 0.755 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
38. SNRPB ENSG00000125835 24302 0.755 - 0.755 small nuclear ribonucleoprotein polypeptides B and B1 [Source:HGNC Symbol;Acc:HGNC:11153]
39. SNRPA ENSG00000077312 4577 0.754 - 0.754 small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:HGNC:11151]
40. NDUFS2 ENSG00000158864 10441 0.754 - 0.754 NADH:ubiquinone oxidoreductase core subunit S2 [Source:HGNC Symbol;Acc:HGNC:7708]
41. TNPO2 ENSG00000105576 7612 0.754 - 0.754 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
42. RNF157 ENSG00000141576 3450 0.753 - 0.753 ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
43. GAPDH ENSG00000111640 150576 0.752 - 0.752 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
44. PLK1 ENSG00000166851 4839 0.75 - 0.750 polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]
45. C19orf43 16805 0.748 - 0.748 chromosome 19 open reading frame 43
46. PUF60 ENSG00000179950, ENSG00000274081 9938 0.747 - 0.747 poly(U) binding splicing factor 60 [Source:HGNC Symbol;Acc:HGNC:17042]
47. UBA1 ENSG00000130985 20298 0.747 - 0.747 ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
48. GPX4 ENSG00000167468 16446 0.745 - 0.745 glutathione peroxidase 4 [Source:HGNC Symbol;Acc:HGNC:4556]
49. EIF5A ENSG00000132507 27570 0.744 - 0.744 eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:HGNC:3300]
50. GPS1 ENSG00000169727 2907 0.743 - 0.743 G protein pathway suppressor 1 [Source:HGNC Symbol;Acc:HGNC:4549]
51. BANF1 ENSG00000175334 19847 0.743 - 0.743 barrier to autointegration factor 1 [Source:HGNC Symbol;Acc:HGNC:17397]
52. H1FX ENSG00000184897 16213 0.737 - 0.737 H1 histone family member X [Source:HGNC Symbol;Acc:HGNC:4722]
53. GTSE1 ENSG00000075218 6178 0.736 - 0.736 G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]
54. PKNOX2 ENSG00000165495 3717 0.735 - 0.735 PBX/knotted 1 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:16714]
55. PRDX2 ENSG00000167815 5248 0.734 - 0.734 peroxiredoxin 2 [Source:HGNC Symbol;Acc:HGNC:9353]
56. GPI ENSG00000105220, ENSG00000282019 6107 0.733 - 0.733 glucose-6-phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:4458]
57. NCAPH2 ENSG00000025770 5066 0.731 - 0.731 non-SMC condensin II complex subunit H2 [Source:HGNC Symbol;Acc:HGNC:25071]
58. HCFC1 ENSG00000172534 21012 0.729 - 0.729 host cell factor C1 [Source:HGNC Symbol;Acc:HGNC:4839]
59. MCM7 ENSG00000166508 22547 0.727 - 0.727 minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]
60. HOXC6 ENSG00000197757 13409 0.727 - 0.727 homeobox C6 [Source:HGNC Symbol;Acc:HGNC:5128]
61. VPS72 ENSG00000163159 11202 0.727 - 0.727 vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
62. TKT ENSG00000163931 3721 0.727 - 0.727 transketolase [Source:HGNC Symbol;Acc:HGNC:11834]
63. EPN1 ENSG00000063245 5192 0.726 - 0.726 epsin 1 [Source:HGNC Symbol;Acc:HGNC:21604]
64. TUBA1B ENSG00000123416 396924 0.726 - 0.726 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
65. IDH2 ENSG00000182054 14070 0.726 - 0.726 isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:5383]
66. UBE2I ENSG00000103275 13271 0.724 - 0.724 ubiquitin conjugating enzyme E2 I [Source:HGNC Symbol;Acc:HGNC:12485]
67. MARCKSL1 ENSG00000175130 73054 0.724 - 0.724 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
68. PSMC4 ENSG00000013275, ENSG00000281221 6978 0.724 - 0.724 proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551]
69. RPL4 ENSG00000174444 87809 0.723 - 0.723 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
70. SF3B3 ENSG00000189091 8156 0.722 - 0.722 splicing factor 3b subunit 3 [Source:HGNC Symbol;Acc:HGNC:10770]
71. IMP3 ENSG00000177971 12586 0.721 - 0.721 IMP3, U3 small nucleolar ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14497]
72. FN3KRP ENSG00000141560 4993 0.718 - 0.718 fructosamine 3 kinase related protein [Source:HGNC Symbol;Acc:HGNC:25700]
73. HNRNPUL1 ENSG00000105323 23988 0.716 - 0.716 heterogeneous nuclear ribonucleoprotein U like 1 [Source:HGNC Symbol;Acc:HGNC:17011]
74. COTL1 ENSG00000103187 30280 0.715 - 0.715 coactosin like F-actin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:18304]
75. XPO6 ENSG00000169180 5152 0.715 - 0.715 exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
76. MLF2 ENSG00000089693 18042 0.715 - 0.715 myeloid leukemia factor 2 [Source:HGNC Symbol;Acc:HGNC:7126]
77. DDX19B ENSG00000157349 1392 0.714 - 0.714 DEAD-box helicase 19B [Source:HGNC Symbol;Acc:HGNC:2742]
78. NES ENSG00000132688 20034 0.714 - 0.714 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
79. SMARCA4 ENSG00000127616 21398 0.713 - 0.713 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
80. RNASEH2A ENSG00000104889 5434 0.713 - 0.713 ribonuclease H2 subunit A [Source:HGNC Symbol;Acc:HGNC:18518]
81. FAM127B 11371 0.712 - 0.712 family with sequence similarity 127 member B, transcript variant 2
82. KHSRP ENSG00000088247 13538 0.711 - 0.711 KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]
83. CENPV ENSG00000166582 18001 0.71 - 0.710 centromere protein V [Source:HGNC Symbol;Acc:HGNC:29920]
84. SH3BGRL3 ENSG00000142669 26565 0.71 - 0.710 SH3 domain binding glutamate rich protein like 3 [Source:HGNC Symbol;Acc:HGNC:15568]
85. CDC20 ENSG00000117399 3927 0.709 - 0.709 cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]
86. FBL ENSG00000105202, ENSG00000280548 28225 0.709 - 0.709 fibrillarin [Source:HGNC Symbol;Acc:HGNC:3599]
87. RAB8A ENSG00000167461 5438 0.707 - 0.707 RAB8A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:7007]
88. MCM5 ENSG00000100297 8452 0.707 - 0.707 minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]
89. TBCD ENSG00000141556, ENSG00000278759 1934 0.705 - 0.705 tubulin folding cofactor D [Source:HGNC Symbol;Acc:HGNC:11581]
90. VPS51 ENSG00000149823 3337 0.704 - 0.704 VPS51, GARP complex subunit [Source:HGNC Symbol;Acc:HGNC:1172]
91. PMF1 ENSG00000160783 12298 0.701 - 0.701 polyamine modulated factor 1 [Source:HGNC Symbol;Acc:HGNC:9112]
92. ATP6V0C ENSG00000185883 26903 0.7 - 0.700 ATPase H+ transporting V0 subunit c [Source:HGNC Symbol;Acc:HGNC:855]
93. HSP90AB1 ENSG00000096384 183977 0.7 - 0.700 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA