Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SRL

Gene Name Gene ID Reads Annotation
SRL ENSGALG00000038884 19 sarcalumenin [Source:NCBI gene;Acc:396269]











Genes with expression patterns similar to SRL

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRL ENSGALG00000038884 19 4 - - 1.000 1.000 1.000 - - - - 1.000 sarcalumenin [Source:NCBI gene;Acc:396269]
2. HPGDS ENSGALG00000010402 343 1.473 - - - 0.763 - - - - - 0.710 hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
3. STX17 ENSGALG00000013462 40 0.912 - - - 0.912 - - - - - - syntaxin 17 [Source:NCBI gene;Acc:420995]
4. SLC6A1 ENSGALG00000004921 118 0.85 - - - - - - - - - 0.850 solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
5. PCDH17 ENSGALG00000016941 1006 0.846 - - - - - - - - - 0.846 protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
6. TMTC1 ENSGALG00000012956 160 0.829 - - - 0.829 - - - - - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
7. STXBP5L ENSGALG00000032361 41 0.818 - - - - - - - - - 0.818 syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
8. BMPR-II BMPR-II 33 0.815 - - - - - - - - - 0.815
9. TITIN TITIN 589 0.813 - - - - - - - - - 0.813
10. U4 U4 69 0.806 - - - - 0.806 - - - - -
11. THSD4 ENSGALG00000004087 12 0.804 - - - 0.804 - - - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
12. ELF5 ENSGALG00000035867 6 0.804 - - - 0.804 - - - - - - E74 like ETS transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3320]
13. SV2C ENSGALG00000014967 7 0.804 - - - 0.804 - - - - - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
14. TAMM41 ENSGALG00000004940 2 0.804 - - - 0.804 - - - - - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:HGNC Symbol;Acc:HGNC:25187]
15. VPAC2 VPAC2 45 0.804 - - - 0.804 - - - - - -
16. CRYGS ENSGALG00000006574 9 0.804 - - - 0.804 - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
17. ZSWIM6 ENSGALG00000014734 7 0.804 - - - 0.804 - - - - - - zinc finger SWIM-type containing 6, transcript variant X2
18. SUFU ENSGALG00000008096 307 0.804 - - - 0.804 - - - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
19. COL15A1 ENSGALG00000034119 9 0.804 - - - 0.804 - - - - - - collagen type XV alpha 1 chain, transcript variant X6
20. C1ORF146 C1ORF146 2 0.804 - - - 0.804 - - - - - -
21. ENSGALG00000023271 ENSGALG00000023271 3 0.804 - - - 0.804 - - - - - -
22. ENSGALG00000021859 ENSGALG00000021859 2 0.804 - - - 0.804 - - - - - -
23. PTCH2 ENSGALG00000010133 16 0.804 - - - 0.804 - - - - - - patched 2 [Source:HGNC Symbol;Acc:HGNC:9586]
24. KCNJ16 ENSGALG00000004373 6 0.804 - - - 0.804 - - - - - - potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
25. DKK-1 DKK-1 146 0.802 - - - - 0.802 - - - - -
26. E2F3 ENSGALG00000012680 21 0.792 - - - - - - - - - 0.792 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
27. TLL2 ENSGALG00000005519 10 0.787 - - - 0.787 - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
28. CCDC3 ENSGALG00000030140 258 0.781 - - - - - - - - - 0.781 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
29. C9H2ORF82 ENSGALG00000040264 4201 0.78 - - - - - - - - - 0.780 chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
30. EPYC ENSGALG00000011269 17 0.779 - - - 0.779 - - - - - - epiphycan [Source:NCBI gene;Acc:417890]
31. MPEG1 ENSGALG00000028536 99 0.776 - - - - - - - - - 0.776 macrophage expressed 1 [Source:HGNC Symbol;Acc:HGNC:29619]
32. CCDC39 ENSGALG00000021855 23 0.775 - - - - - - - - - 0.775 coiled-coil domain containing 39
33. KCTD3 ENSGALG00000009678 335 0.775 - - - - - - - - - 0.775 potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
34. MYOG ENSGALG00000000172 460 0.774 - - - - - - - - - 0.774 myogenin [Source:NCBI gene;Acc:374004]
35. GPRC5B ENSGALG00000002028 28 0.774 - - - 0.774 - - - - - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
36. ANKRD34B ENSGALG00000044727 9 0.772 - - - 0.772 - - - - - - ankyrin repeat domain 34B [Source:HGNC Symbol;Acc:HGNC:33736]
37. PEAK1 ENSGALG00000002759 39 0.766 - - - - - - - - - 0.766 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
38. TWIST1 ENSGALG00000041640 1176 0.764 - - - - - - - - - 0.764 twist family bHLH transcription factor 1 [Source:NCBI gene;Acc:395491]
39. ENSGALG00000006213 ENSGALG00000006213 7 0.762 - - - 0.762 - - - - - -
40. SLC29A4 ENSGALG00000010497 43 0.761 - - - 0.761 - - - - - - solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
41. LRRTM1 ENSGALG00000015967 85 0.753 - - - 0.753 - - - - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
42. SPON2 ENSGALG00000038433 1240 0.753 - - - - - - - - - 0.753 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
43. VSTM2L ENSGALG00000006792 11 0.75 - - - - - - - - - 0.750 V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
44. ENSGALG00000010218 ENSGALG00000010218 12 0.744 - - - 0.744 - - - - - -
45. CARD9 ENSGALG00000001889 83 0.739 - - - - - - - - - 0.739 caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
46. ADCY7 ENSGALG00000003837 10 0.736 - - 0.736 - - - - - - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
47. EML4 ENSGALG00000009915 628 0.735 - - - - - - - - - 0.735 echinoderm microtubule associated protein like 4 [Source:HGNC Symbol;Acc:HGNC:1316]
48. GP130 GP130 42 0.731 - - - - - - - - - 0.731
49. BCR ENSGALG00000006695 22 0.731 - - - - - - - - - 0.731 BCR, RhoGEF and GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:1014]
50. TIMP3 ENSGALG00000028627 8706 0.73 - - - - - - - - - 0.730 TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
51. ITPR3 ENSGALG00000003149 2351 0.73 - - - - - - - - - 0.730 inositol 1,4,5-trisphosphate receptor type 3 [Source:HGNC Symbol;Acc:HGNC:6182]
52. CHADL ENSGALG00000011970 42 0.729 - - - - - - - - - 0.729 chondroadherin-like [Source:NCBI gene;Acc:417998]
53. AFTPH ENSGALG00000008828 21 0.728 - - - 0.728 - - - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
54. CCDC147 CCDC147 53 0.728 - - - - - - - - - 0.728
55. COL11A1 ENSGALG00000005180 244 0.728 - - - 0.728 - - - - - - collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
56. SLC25A12 ENSGALG00000009545 36 0.726 - - - - - - - - - 0.726 solute carrier family 25 member 12 [Source:HGNC Symbol;Acc:HGNC:10982]
57. HDAC9 ENSGALG00000010854 49 0.724 - - - - - - - - - 0.724 histone deacetylase 9 [Source:NCBI gene;Acc:420599]
58. MFAP2 ENSGALG00000030647 235 0.723 - - - 0.723 - - - - - - microfibril associated protein 2 [Source:HGNC Symbol;Acc:HGNC:7033]
59. TSPO ENSGALG00000014166 60 0.722 - - - - - - - - - 0.722 translocator protein [Source:NCBI gene;Acc:418226]
60. VIPR1 ENSGALG00000005259 3 0.722 - - - - - - - - - 0.722 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
61. CUBN ENSGALG00000008704 21 0.722 - - - - - - - - - 0.722 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
62. XKRX ENSGALG00000006637 13 0.722 - - - - - - - - - 0.722 XK related, X-linked, transcript variant X4
63. CKV6.3 CKV6.3 13 0.722 - - - - - - - - - 0.722
64. SNORA53 SNORA53 6 0.722 - - - - - - - - - 0.722
65. AZI2 ENSGALG00000011428 24 0.722 - - - 0.722 - - - - - - 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
66. BF1 ENSGALG00000033932 18 0.722 - - - - - - - - - 0.722 MHC BF1 class I [Source:NCBI gene;Acc:693260]
67. ENSGALG00000026222 ENSGALG00000026222 3 0.722 - - - - - - - - - 0.722
68. LYG2 ENSGALG00000016761 7 0.722 - - - - - - - - - 0.722 lysozyme g2 [Source:NCBI gene;Acc:395708]
69. COL25A1 ENSGALG00000039411 5 0.722 - - - - - - - - - 0.722 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
70. ETNK1 ENSGALG00000013205 18 0.72 - - - - 0.720 - - - - - ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
71. COL23A1 ENSGALG00000006708 181 0.72 - - - - - - - - - 0.720 collagen type XXIII alpha 1 chain, transcript variant X1
72. MAP3K2 42 0.718 - - - - 0.718 - - - - - mitogen-activated protein kinase kinase kinase 2, transcript variant X3
73. THSD1 ENSGALG00000028083 2 0.718 - - - - 0.718 - - - - - thrombospondin type 1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17754]
74. EPHA2 ENSGALG00000039895 12 0.718 - - - - 0.718 - - - - - EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
75. SLC13A4 ENSGALG00000012908 3 0.718 - - - - 0.718 - - - - - solute carrier family 13 member 4 [Source:HGNC Symbol;Acc:HGNC:15827]
76. CLPS ENSGALG00000034934 2 0.718 - - - - 0.718 - - - - - colipase [Source:NCBI gene;Acc:771102]
77. NHLRC3 ENSGALG00000017037 6 0.718 - - - - 0.718 - - - - - NHL repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:33751]
78. TMEM245 ENSGALG00000013138 501 0.718 - - - - - - - - - 0.718 transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
79. KIAA1324 ENSGALG00000030941 4 0.718 - - - - 0.718 - - - - - KIAA1324 [Source:HGNC Symbol;Acc:HGNC:29618]
80. SCARNA7 SCARNA7 2 0.718 - - - - 0.718 - - - - -
81. SACM1L ENSGALG00000040902 70 0.716 - - - 0.716 - - - - - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
82. RREB1 ENSGALG00000012799 125 0.716 - - - - - - - - - 0.716 ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
83. MUC5B MUC5B 62 0.714 - - - - - - - - - 0.714
84. RC3H1 ENSGALG00000004587 40 0.714 - - - 0.714 - - - - - - ring finger and CCCH-type domains 1 [Source:HGNC Symbol;Acc:HGNC:29434]
85. SNORA74 SNORA74 8 0.711 - - - 0.711 - - - - - -
86. FRRS1 ENSGALG00000005418 332 0.71 - - - - - - - - - 0.710 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
87. IQCE ENSGALG00000004329 442 0.708 - - - - - - - - - 0.708 IQ motif containing E, transcript variant X1
88. FNDC4 ENSGALG00000016507 55 0.708 - - - - - - - - - 0.708 Gallus gallus fibronectin type III domain containing 4 (FNDC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318412]
89. GDAP1L1 ENSGALG00000004309 47 0.706 - - - - 0.706 - - - - - ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
90. MANSC4 32 0.705 - - - - - - - - - 0.705 MANSC domain containing 4, transcript variant X1
91. MAF ENSGALG00000026258 45 0.703 - - - 0.703 - - - - - - MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
92. RARRES2 ENSGALG00000042642 3043 0.702 - - - - - - - - - 0.702 retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
93. PKIA ENSGALG00000035525 20 0.702 - - - 0.702 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor alpha [Source:NCBI gene;Acc:396333]
94. ENSGALG00000015793 ENSGALG00000015793 12 0.702 - - - 0.702 - - - - - -
95. ENTPD5 ENSGALG00000010202 69 0.701 - - - - - - - - - 0.701 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
96. FNDC1 ENSGALG00000011663 1040 0.701 - - - - - - - - - 0.701 fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
97. ENSGALG00000028680 ENSGALG00000028680 3 0.7 - - - 0.700 - - - - - -
98. C15orf27 C15orf27 1206 0.7 - - - - - - - - - 0.700
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA