Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SRI

Gene Name Gene ID Reads Annotation
SRI ENSGALG00000008985 13865 sorcin [Source:NCBI gene;Acc:420538]











Genes with expression patterns similar to SRI

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRI ENSGALG00000008985 13865 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorcin [Source:NCBI gene;Acc:420538]
2. COPB2 ENSGALG00000005357 15208 1.7 - - - - - - 0.715 0.985 - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
3. SDHD ENSGALG00000007878 25129 1.682 - - - - - - 0.749 0.933 - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
4. PPP2R5C ENSGALG00000029996 5759 1.647 - - - - - - 0.851 0.796 - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
5. FGFR2 ENSGALG00000009495 15391 1.608 - - - - - - 0.832 0.776 - - fibroblast growth factor receptor 2 [Source:NCBI gene;Acc:396259]
6. RPF1 ENSGALG00000008796 9809 1.597 - - - 0.788 - - - 0.809 - - ribosome production factor 1 homolog
7. DCAF7 ENSGALG00000000510 8681 1.584 - - - - - - 0.722 0.862 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
8. ST5 6869 1.577 - - - 0.727 - - - 0.850 - - suppression of tumorigenicity 5, transcript variant X1
9. GALNT1 ENSGALG00000013135 13583 1.575 - - - - - - 0.729 0.846 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
10. NDUFS7 ENSGALG00000009703 19674 1.573 - - - - - - 0.819 0.754 - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
11. MT-ND4L MT-ND4L 12537 1.567 - - - - - - 0.784 0.783 - -
12. NABP1 ENSGALG00000025884 4195 1.567 - - - - - - 0.711 0.856 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
13. TRNT1 ENSGALG00000017368 11932 1.565 - - - - - - 0.713 0.852 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
14. ENSGALG00000009044 ENSGALG00000009044 14492 1.56 - - - 0.711 - - 0.849 - - -
15. EGLN1 ENSGALG00000041422 11032 1.494 - - - - - - 0.737 0.757 - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
16. ZCCHC8 ENSGALG00000004486 3201 1.467 - - - - - - 0.720 0.747 - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
17. DBNDD2 ENSGALG00000003921 8301 1.443 - - - 0.736 - - - 0.707 - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
18. ALG2 ENSGALG00000013573 5229 0.958 - - - - - - - 0.958 - - ALG2, alpha-1,3/1,6-mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23159]
19. gga-mir-1778 ENSGALG00000025181 8765 0.919 - - - - - - - 0.919 - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
20. XBP1 ENSGALG00000005796 14007 0.901 - - - - - - 0.901 - - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
21. GPATCH1 ENSGALG00000004839 6455 0.901 - - - - - - - 0.901 - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
22. DEK ENSGALG00000012684 14179 0.895 - - - - - - 0.895 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
23. HMGB2 ENSGALG00000010745 89235 0.883 - - - - - - 0.883 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
24. TRABD ENSGALG00000030705 6577 0.879 - - - - - - 0.879 - - - TraB domain containing [Source:NCBI gene;Acc:417746]
25. PPP1R7 ENSGALG00000031766 22187 0.876 - - - - - - 0.876 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
26. AZIN1 ENSGALG00000029295 11085 0.876 - - - - - - 0.876 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
27. EIF2S1 ENSGALG00000009565 63906 0.871 - - - - - - 0.871 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
28. TMEM123 ENSGALG00000017185 6798 0.87 - - - - - - 0.870 - - - transmembrane protein 123 [Source:NCBI gene;Acc:418984]
29. PDZD11 ENSGALG00000004198 11484 0.87 - - - - - - - 0.870 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
30. PCNP ENSGALG00000015330 15750 0.869 - - - - - - 0.869 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
31. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.868 - - - - - - 0.868 - - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
32. MRPL20 ENSGALG00000001542 28764 0.863 - - - - - - 0.863 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
33. UQCRC2 ENSGALG00000002490 23477 0.861 - - - - - - 0.861 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
34. HCFC2 ENSGALG00000029616 4525 0.857 - - - - - - - 0.857 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
35. MMD ENSGALG00000003078 21311 0.857 - - - - - - 0.857 - - - monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
36. ENSGALG00000016887 ENSGALG00000016887 20086 0.857 - - - - - - 0.857 - - -
37. DHFR ENSGALG00000026757 18478 0.856 - - - - - - - 0.856 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
38. SDAD1 ENSGALG00000011543 5191 0.856 - - - - - - - 0.856 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
39. PI4KA ENSGALG00000040756 3973 0.856 - - - - - - - 0.856 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
40. LONP1 ENSGALG00000040492 7133 0.855 - - - - - - - 0.855 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
41. RP2 ENSGALG00000016728 3291 0.855 - - - - - - - 0.855 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
42. ABL ABL 9532 0.855 - - - - - - - 0.855 - -
43. SYNE2 ENSGALG00000011811 5542 0.854 - - - - - - - 0.854 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
44. PDCD10 ENSGALG00000009477 7061 0.854 - - - - - - 0.854 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
45. RGL1 ENSGALG00000004728 3004 0.854 - - - - - - - 0.854 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
46. NIFK ENSGALG00000011650 14990 0.853 - - - - - - 0.853 - - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
47. USP9X ENSGALG00000016236 9419 0.853 - - - - - - - 0.853 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
48. PPP3CB ENSGALG00000005243 8794 0.853 - - - - - - - 0.853 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
49. NDUFAF2 ENSGALG00000027564 7302 0.853 - - - - - - - 0.853 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
50. SSBP1 ENSGALG00000012876 34256 0.852 - - - - - - 0.852 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
51. DTD2 ENSGALG00000009978 4322 0.852 - - - - - - - 0.852 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
52. MFN1 ENSGALG00000041873 4170 0.851 - - - - - - - 0.851 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
53. DARS ENSGALG00000012355 2887 0.85 - - - - - - - 0.850 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
54. PYURF ENSGALG00000039869 5657 0.85 - - - - - - - 0.850 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
55. CSE1L ENSGALG00000004707 20653 0.85 - - - - - - 0.850 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
56. SEC11A ENSGALG00000037553 32123 0.85 - - - - - - 0.850 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
57. DUT ENSGALG00000038032 34659 0.85 - - - - - - 0.850 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
58. C3H6ORF120 C3H6ORF120 2712 0.85 - - - - - - - 0.850 - -
59. C C 7669 0.849 - - - - - - 0.849 - - -
60. DKC1 ENSGALG00000005054 30350 0.848 - - - - - - 0.848 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
61. GLO1 ENSGALG00000010127 31662 0.848 - - - - - - 0.848 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
62. UBQLN1 ENSGALG00000012585 5158 0.848 - - - - - - - 0.848 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
63. LYPLA2 ENSGALG00000004002 3939 0.848 - - - - - - - 0.848 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
64. TP53INP1 ENSGALG00000041353 6890 0.847 - - - - - - - 0.847 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
65. PHF12 ENSGALG00000031368 1960 0.847 - - - - - - - 0.847 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
66. SOD1 ENSGALG00000015844 35836 0.847 - - - - - - 0.847 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
67. AATF ENSGALG00000005420 6501 0.847 - - - - - - 0.847 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
68. HIC2 ENSGALG00000033416 4051 0.846 - - - - - - - 0.846 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
69. DIP2C ENSGALG00000006652 1858 0.846 - - - - - - - 0.846 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
70. NDUFA1 ENSGALG00000008613 20410 0.846 - - - - - - 0.846 - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:NCBI gene;Acc:772150]
71. RFWD3 2315 0.845 - - - - - - - 0.845 - - ring finger and WD repeat domain 3
72. RRAGD ENSGALG00000026971 2429 0.845 - - - - - - - 0.845 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
73. ENSGALG00000004643 ENSGALG00000004643 2297 0.844 - - - - - - - 0.844 - -
74. PPP1CC ENSGALG00000004571 14748 0.844 - - - - - - 0.844 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
75. ACTR10 ENSGALG00000012041 2752 0.844 - - - - - - - 0.844 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
76. HAPLN1 ENSGALG00000015627 14942 0.843 - - - - - - - 0.843 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
77. NDUFS8 ENSGALG00000040173 24745 0.843 - - - - - - 0.843 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
78. COMMD7 ENSGALG00000006630 11491 0.843 - - - - - - - 0.843 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
79. CDC123 ENSGALG00000014038 1418 0.843 - - - - - - - 0.843 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
80. DACH1 ENSGALG00000037015 5648 0.843 - - - - - - - 0.843 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
81. SOCS5 ENSGALG00000010016 1134 0.842 - - - - - - - 0.842 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
82. WDR47 ENSGALG00000002129 2624 0.842 - - - - - - - 0.842 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
83. NUDCD1 ENSGALG00000040879 2965 0.842 - - - - - - - 0.842 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
84. CUTC ENSGALG00000037283 2530 0.842 - - - - - - - 0.842 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
85. TMEFF1 ENSGALG00000013212 4222 0.842 - - - - - - - 0.842 - - transmembrane protein with EGF-like and two follistatin-like domains 1
86. DERL3 ENSGALG00000005994 1499 0.841 - - - - - - - 0.841 - - derlin 3 [Source:NCBI gene;Acc:416934]
87. SNAI1 ENSGALG00000008018 3930 0.841 - - - - - - - 0.841 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
88. PTPLB PTPLB 13107 0.841 - - - - - - - 0.841 - -
89. TTC39A ENSGALG00000010540 1025 0.841 - - - - - - - 0.841 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
90. SDF2 ENSGALG00000037709 12283 0.84 - - - - - - 0.840 - - - stromal cell derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]
91. RGMA ENSGALG00000039173 12874 0.84 - - - - - - - 0.840 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
92. TOLLIP ENSGALG00000006697 917 0.84 - - - - - - - 0.840 - - toll interacting protein [Source:NCBI gene;Acc:423099]
93. FAM114A1 ENSGALG00000013583 736 0.839 - - - - - - - 0.839 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
94. THRAP3 ENSGALG00000002144 21958 0.839 - - - - - - 0.839 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
95. ZNF639 ENSGALG00000005944 6387 0.839 - - - - - - - 0.839 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
96. SLC43A3 ENSGALG00000020479 1332 0.839 - - - - - - - 0.839 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
97. USP3 ENSGALG00000003427 1236 0.839 - - - - - - - 0.839 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
98. PPIH ENSGALG00000004874 25558 0.839 - - - - - - 0.839 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
99. ACL ACL 1813 0.839 - - - - - - - 0.839 - -
100. OLFM1 ENSGALG00000002515 1841 0.838 - - - - - - - 0.838 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]

There are 529 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA