Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRGAP3

Gene Name Gene ID Reads Annotation
SRGAP3 ENSGALG00000008378 4331 SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]











Genes with expression patterns similar to SRGAP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRGAP3 ENSGALG00000008378 4331 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
2. HES5 ENSGALG00000001141 6514 3.924 - - 0.816 0.706 0.743 0.880 - - 0.779 - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
3. RASSF2 ENSGALG00000030432 4822 3.719 - - - - 0.709 0.770 0.760 - 0.755 0.725 Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
4. ZIC1 ENSGALG00000040532 6543 3.367 - - 0.840 0.814 - 0.878 - - 0.835 - Zic family member 1 [Source:NCBI gene;Acc:374103]
5. ENSGALG00000027002 ENSGALG00000027002 7570 2.988 - - 0.736 - 0.761 0.701 - - 0.790 -
6. CSPG5 ENSGALG00000032184 991 2.943 - - 0.751 0.750 - 0.739 0.703 - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
7. DENND5B 4077 2.515 - - 0.784 - 0.829 0.902 - - - - DENN domain containing 5B, transcript variant X1
8. CERCAM ENSGALG00000004986 5158 2.471 - - 0.733 - 0.804 0.934 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
9. GNG10 ENSGALG00000015683 6905 2.441 - - 0.765 - 0.796 0.880 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
10. DRAXIN ENSGALG00000004631 3122 2.436 - - 0.790 0.811 - 0.835 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
11. CRABP-I ENSGALG00000003193 67258 2.432 - - 0.777 - - 0.895 - - 0.760 - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
12. ZIC3 ENSGALG00000031144 863 2.382 - - - 0.798 0.769 0.815 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
13. TUBB2B ENSGALG00000012821 41535 2.352 - - 0.736 - - 0.793 - - 0.823 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
14. PTPRZ1 ENSGALG00000040114 3410 2.301 - - 0.767 0.729 - 0.805 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
15. LIPG ENSGALG00000043734 2490 1.738 - - - - - 0.925 0.813 - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
16. NSG1 ENSGALG00000015010 5829 1.65 - - - - - 0.917 - - 0.733 - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
17. MARCKSL1 ENSGALG00000032335 88728 1.644 - - - - - 0.856 - - 0.788 - MARCKS like 1 [Source:NCBI gene;Acc:770764]
18. LFNG ENSGALG00000038515 5178 1.625 - - 0.753 - - 0.872 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
19. OPTC ENSGALG00000003554 3698 1.609 - - 0.732 - - 0.877 - - - - opticin [Source:NCBI gene;Acc:395130]
20. NPAS3 ENSGALG00000029022 1950 1.601 - - 0.754 - - 0.847 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
21. WNT4 ENSGALG00000041708 1277 1.586 - - - 0.731 - 0.855 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
22. FZD3 ENSGALG00000042308 3356 1.584 - - - - - 0.839 - - 0.745 - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
23. ACVR2B ENSGALG00000006158 8692 1.582 - - - - - 0.832 - - 0.750 - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
24. HOXD4 ENSGALG00000023419 6073 1.575 - - - - 0.773 0.802 - - - - homeobox D4 [Source:NCBI gene;Acc:424139]
25. CKB ENSGALG00000011511 2100 1.571 - - - - 0.767 0.804 - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
26. PROCA1 668 1.569 - - 0.766 - - 0.803 - - - - protein interacting with cyclin A1
27. IRX1 ENSGALG00000030991 1474 1.562 - - - - - 0.817 0.745 - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
28. TAGLN3 ENSGALG00000015379 7865 1.543 - - 0.742 - - - - - 0.801 - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
29. TRABD2A ENSGALG00000026395 704 1.534 - - - - 0.734 0.800 - - - - TraB domain containing 2A, transcript variant X3
30. PCDH8 ENSGALG00000036258 1945 1.522 - - - - 0.814 0.708 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
31. LDHB ENSGALG00000035836 169726 1.51 - - - - - 0.757 - - 0.753 - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
32. ENSGALG00000027373 ENSGALG00000027373 2129 1.487 - - 0.743 0.744 - - - - - -
33. LRP11 ENSGALG00000019987 3341 1.486 - - - - - - 0.785 - - 0.701 LDL receptor related protein 11 [Source:HGNC Symbol;Acc:HGNC:16936]
34. CRMP1B CRMP1B 18633 1.484 - - - - 0.712 - - - 0.772 -
35. PKM ENSGALG00000001992 93960 1.465 - - 0.720 - - - - - 0.745 - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
36. ARHGAP32 ENSGALG00000043511 7916 1.462 - - 0.742 - - - - - - 0.720 Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
37. ALDOC ENSGALG00000026077 106910 1.452 - - 0.712 - - 0.740 - - - - aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
38. ENPP2 ENSGALG00000032746 6086 1.444 - - - - - 0.731 - - 0.713 - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
39. CHCHD10 ENSGALG00000028810 10389 1.437 - - - - - - - 0.712 0.725 - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
40. SYNPR ENSGALG00000007284 1368 1.423 - - - - - - 0.719 - 0.704 - synaptoporin [Source:NCBI gene;Acc:396359]
41. PAX-6 PAX-6 2650 1.412 - - - - 0.708 - - - 0.704 -
42. RTN1 ENSGALG00000012006 2438 0.897 - - - - - 0.897 - - - - reticulon 1 [Source:NCBI gene;Acc:378791]
43. DLL1 ENSGALG00000011182 1613 0.89 - - - - - 0.890 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
44. HOXA7 ENSGALG00000026989 6746 0.878 - - - - - - - - 0.878 - homeobox A7 [Source:NCBI gene;Acc:395290]
45. PAX3 ENSGALG00000030944 2987 0.876 - - - - - 0.876 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
46. MYL4 ENSGALG00000000585 16982 0.868 - - - - - 0.868 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
47. ASTN1 ENSGALG00000004472 855 0.866 - - - - - 0.866 - - - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
48. FABP7 ENSGALG00000038933 6780 0.864 - - - - - 0.864 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
49. PAX-7 PAX-7 3856 0.859 - - - - - 0.859 - - - -
50. NEFM ENSGALG00000000317 6992 0.859 - - - - - 0.859 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
51. RGMA ENSGALG00000039173 12874 0.855 - - - - - - - - 0.855 - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
52. LASP-2 LASP-2 4415 0.85 - - - - - 0.850 - - - -
53. FGFR3 ENSGALG00000015708 16853 0.839 - - - - - 0.839 - - - - fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
54. GUK1 ENSGALG00000005336 5134 0.836 - - - - - - - 0.836 - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
55. RGCC ENSGALG00000016954 1282 0.83 - - - - 0.830 - - - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
56. BTBD17 ENSGALG00000023359 87 0.828 - - - - - 0.828 - - - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
57. MAP2 ENSGALG00000002789 6597 0.827 - - - - - 0.827 - - - - microtubule associated protein 2, transcript variant X33
58. CXCR4 ENSGALG00000012357 1320 0.824 - - - - - 0.824 - - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
59. NHLH1 ENSGALG00000025817 1617 0.82 - - - - - - - - 0.820 - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
60. TANGO2 ENSGALG00000002056 1971 0.818 - - - - - - - 0.818 - - transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
61. SLC35F1 ENSGALG00000029011 14728 0.818 - - - - - 0.818 - - - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
62. C17orf75 ENSGALG00000003434 4262 0.815 - - - - - 0.815 - - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
63. KIAA1671 ENSGALG00000005512 2540 0.814 - - - - - - - 0.814 - - KIAA1671 [Source:NCBI gene;Acc:768701]
64. GABRA3 ENSGALG00000007269 985 0.814 - - - - - 0.814 - - - - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
65. HES6 ENSGALG00000028415 4830 0.814 - - - - - 0.814 - - - - hes family bHLH transcription factor 6
66. SMPD3 ENSGALG00000034950 4335 0.813 - - - - - 0.813 - - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
67. FBP1 ENSGALG00000012613 258 0.807 - - - - - - - 0.807 - - fructose-bisphosphatase 1 [Source:NCBI gene;Acc:395218]
68. RSPO1 ENSGALG00000001946 400 0.806 - - - - - - - 0.806 - - R-spondin 1 [Source:NCBI gene;Acc:419613]
69. CLEC18B ENSGALG00000027183 284 0.805 - - - - - 0.805 - - - - C-type lectin domain family 18 member B, transcript variant X2
70. C1orf168 C1orf168 98 0.801 - - - - - - - 0.801 - -
71. CLN8 ENSGALG00000039606 4209 0.8 - - - - - - - 0.800 - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
72. GHOX-7 GHOX-7 2555 0.799 - - - - - 0.799 - - - -
73. TTYH2 ENSGALG00000026940 15628 0.799 - - - - - - - - 0.799 - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
74. FASN ENSGALG00000040896 17372 0.797 - - - - - 0.797 - - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
75. HEY1 ENSGALG00000035031 8795 0.795 - - - - - - - - 0.795 - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
76. AARS ENSGALG00000001965 1474 0.791 - - - - - - - 0.791 - - alanyl-tRNA synthetase [Source:NCBI gene;Acc:415668]
77. MAN1C1 ENSGALG00000001038 1679 0.79 - - - - - - - 0.790 - - mannosidase alpha class 1C member 1 [Source:HGNC Symbol;Acc:HGNC:19080]
78. COL14A1 ENSGALG00000037675 2652 0.789 - - - - - 0.789 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
79. GALNTL4 GALNTL4 3548 0.788 - - - - - - - 0.788 - -
80. ZBTB16 ENSGALG00000038540 5544 0.788 - - - - - 0.788 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
81. SLC47A1 ENSGALG00000037828 994 0.786 - - - - - - - 0.786 - - solute carrier family 47 member 1 [Source:NCBI gene;Acc:417617]
82. EIF5A2 ENSGALG00000009309 143671 0.785 - - - - - - - - 0.785 - eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
83. IRX2 ENSGALG00000013193 2170 0.783 - - - - - 0.783 - - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
84. BZW1 ENSGALG00000008220 1606 0.781 - - - - - - - 0.781 - - basic leucine zipper and W2 domains 1 [Source:NCBI gene;Acc:424073]
85. NFASC ENSGALG00000031776 4264 0.778 - - - - - 0.778 - - - - neurofascin [Source:NCBI gene;Acc:419824]
86. MOXD1 ENSGALG00000002911 8523 0.776 - - - - - 0.776 - - - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
87. C1orf159 ENSGALG00000027363 1672 0.775 - - - - - - - 0.775 - - chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]
88. FANCB ENSGALG00000016569 1193 0.774 - - - - - - - 0.774 - - FA complementation group B [Source:NCBI gene;Acc:418628]
89. TFAP2A ENSGALG00000012775 294 0.774 - - - - - 0.774 - - - - transcription factor AP-2 alpha [Source:NCBI gene;Acc:395982]
90. EPHA1 ENSGALG00000014687 174 0.773 - - - - - - - 0.773 - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
91. NFRKB ENSGALG00000001306 4469 0.773 - - - - - - - 0.773 - - nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
92. TIPRL ENSGALG00000015246 7875 0.772 - - - - - - - 0.772 - - TOR signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:30231]
93. BRSK2 ENSGALG00000006681 158 0.771 - - - - - 0.771 - - - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
94. TET3 ENSGALG00000037860 3129 0.77 - - - - - - - 0.770 - - tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:HGNC:28313]
95. PEX3 ENSGALG00000013777 3158 0.769 - - - - - - - 0.769 - - peroxisomal biogenesis factor 3
96. IFT46 ENSGALG00000007438 4094 0.769 - - - - - - - 0.769 - - intraflagellar transport 46, transcript variant X1
97. HOXB-7 HOXB-7 2066 0.769 - - - 0.769 - - - - - -
98. SPIRE2 ENSGALG00000000521 26 0.769 - - - - - 0.769 - - - - spire type actin nucleation factor 2 [Source:HGNC Symbol;Acc:HGNC:30623]
99. FABP5 ENSGALG00000041344 3984 0.768 - - - - - - 0.768 - - - fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
100. BMP7 ENSGALG00000007668 6645 0.767 - - - - - 0.767 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]

There are 135 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA