Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SRGAP3

Gene Name Gene ID Reads Annotation
SRGAP3 ENSDARG00000060309 5353 SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]










Genes with expression patterns similar to SRGAP3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SRGAP3 ENSDARG00000060309 5353 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
2. MAP4K4 ENSDARG00000098670 4665 2.717 - 0.966 0.806 - - - 0.945 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
3. CU633999.1 ENSDARG00000098197 2880 2.649 - - - - 0.939 - 0.768 - 0.942
4. ftr82 ENSDARG00000055647 3302 2.647 0.799 0.903 - - - - - - 0.945 finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
5. pdcd10b ENSDARG00000012591 3395 2.56 - 0.926 - - - - 0.826 0.808 - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
6. casc5 1487 2.527 - - - - 0.961 0.753 - 0.813 - cancer susceptibility candidate 5, transcript variant X3
7. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 2.513 - 0.960 0.732 - 0.821 - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
8. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.474 - - 0.770 0.734 0.970 - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
9. rbm4.2 ENSDARG00000055080 5241 2.444 - - 0.731 - 0.904 - 0.809 - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
10. LRP10 ENSDARG00000054539 1895 2.44 0.803 - - - - - 0.819 0.818 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
11. G3BP2_1 G3BP2_1 2390 2.337 0.713 - 0.722 - - - - 0.902 -
12. kdm1a ENSDARG00000060679 6152 2.316 - - 0.717 0.705 0.894 - - - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
13. spen ENSDARG00000074245, ENSDARG00000116696 3054 1.924 - 0.977 - - - - - - 0.947 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
14. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 1.912 - 0.959 - - 0.953 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
15. scube2 ENSDARG00000037362 2833 1.9 - 0.965 - - 0.935 - - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
16. smo ENSDARG00000002952 6411 1.898 - - - - 0.952 - - - 0.946 smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
17. hccs hccs 1758 1.895 - 0.955 - - 0.940 - - - -
18. NPR2 ENSDARG00000104393 1875 1.892 - - - - 0.947 - - - 0.945 natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
19. ing5b ENSDARG00000068175 2502 1.891 - 0.963 - - 0.928 - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
20. PELP1 ENSDARG00000079313 5771 1.855 - 0.921 - - - - - - 0.934 proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
21. spcs2 ENSDARG00000042823 10032 1.839 - - - - 0.956 - - - 0.883 signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
22. purbb ENSDARG00000103546 4983 1.831 - 0.887 - - - - - - 0.944 purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
23. eif4a3 ENSDARG00000102978 16162 1.829 - - - - - - 0.901 - 0.928 eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
24. acadvl ENSDARG00000016687 5329 1.814 - 0.971 - - 0.843 - - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
25. lmf2b ENSDARG00000025859, ENSDARG00000115591 2671 1.806 - - - - 0.960 0.846 - - - lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
26. paxip1 ENSDARG00000005606 1417 1.802 - - - - 0.958 - - 0.844 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
27. sltm ENSDARG00000052728 6234 1.786 - 0.941 - - - 0.845 - - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
28. nefma ENSDARG00000021351 790 1.784 - - - - 0.950 - 0.834 - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
29. med14 ENSDARG00000009953 1383 1.781 - - - - 0.954 - 0.827 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
30. rpl7l1 ENSDARG00000042864 3256 1.777 - 0.937 - - 0.840 - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
31. cd9b ENSDARG00000016691 15573 1.775 - - - - 0.886 - - - 0.889 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
32. klf6a ENSDARG00000029072 3758 1.773 - 0.960 - - - - 0.813 - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
33. flncb ENSDARG00000018820 5595 1.773 - 0.833 - - - - - - 0.940 filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
34. CORO1C CORO1C 5554 1.77 - - - - - - 0.813 - 0.957
35. loxl2b ENSDARG00000044074 1919 1.768 - - - - 0.951 - 0.817 - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
36. nup50 ENSDARG00000017454 4425 1.766 - - 0.799 - 0.967 - - - - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
37. tex2 ENSDARG00000078186 2467 1.759 - 0.973 - - - - 0.786 - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
38. hoxa10b ENSDARG00000031337 3992 1.754 - 0.961 - - - - 0.793 - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
39. axin2 ENSDARG00000100149 4223 1.752 0.818 - - - 0.934 - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
40. gatad2ab ENSDARG00000006192 2461 1.751 - - - - 0.940 - - 0.811 - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
41. zgc:77262 ENSDARG00000044545 5563 1.75 - - 0.797 - - - - - 0.953 zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
42. anapc16 ENSDARG00000013822 5857 1.748 - 0.967 - - - - - 0.781 - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
43. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.741 - 0.946 - - - - 0.795 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
44. dpp9 ENSDARG00000052606 2279 1.737 - - - - 0.938 - 0.799 - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
45. ddx3 ddx3 4076 1.735 - 0.967 - - - - 0.768 - -
46. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.731 - - 0.775 - - - - - 0.956 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
47. gabarapl2 ENSDARG00000027200 5120 1.731 - - - - - 0.882 - 0.849 - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
48. srpk1b ENSDARG00000031560 2079 1.729 - - 0.777 - 0.952 - - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
49. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.727 - - 0.754 - 0.973 - - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
50. cdv3 ENSDARG00000023028 12380 1.723 - 0.922 - - - - - 0.801 - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
51. abi1a ENSDARG00000010155 5631 1.723 - - - - 0.879 - 0.844 - - abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
52. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.717 - 0.973 - - - - 0.744 - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
53. znf865 ENSDARG00000036698 15532 1.713 - - - 0.781 0.932 - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
54. arpc1a ENSDARG00000008383 7353 1.712 - - - - - - - 0.772 0.940 actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
55. atp6v1h ENSDARG00000006370 7028 1.709 - - - - - - - 0.799 0.910 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
56. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.709 - - - - 0.952 - 0.757 - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
57. bves ENSDARG00000058548 2291 1.705 - 0.944 - - - - 0.761 - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
58. LDLR LDLR 838 1.702 0.742 0.960 - - - - - - -
59. aida ENSDARG00000014532 1751 1.702 - - - - - - 0.808 - 0.894 axin interactor, dorsalization associated [Source:ZFIN;Acc:ZDB-GENE-071126-2]
60. akirin2 ENSDARG00000058729 13245 1.702 0.733 0.969 - - - - - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
61. TNRC6C_1 TNRC6C_1 6574 1.701 - - - 0.748 - - - - 0.953
62. C19H1orf85 C19H1orf85 1587 1.701 0.731 0.970 - - - - - - -
63. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.698 - 0.960 - - - 0.738 - - -
64. mgst2 ENSDARG00000071345 5626 1.698 - - - - - - 0.782 - 0.916 microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
65. si:ch211-150o23.2 ENSDARG00000092746 788 1.695 - - - - 0.949 0.746 - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
66. ccnb1 ENSDARG00000051923 3226 1.693 - - - - - 0.724 0.969 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
67. btbd10b ENSDARG00000020252 7251 1.693 - - - - - 0.749 - - 0.944 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
68. atl3 ENSDARG00000004270 2806 1.687 - - - - 0.930 0.757 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
69. ago4 ENSDARG00000100854 496 1.687 0.735 - - - 0.952 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
70. zgc:113442 ENSDARG00000101906 3092 1.682 0.781 - - - 0.901 - - - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
71. atp6v1e1b ENSDARG00000030694 5452 1.682 - 0.792 - - 0.890 - - - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
72. CU655970.1 CU655970.1 2123 1.68 0.719 0.961 - - - - - - -
73. cenpe ENSDARG00000063385 4428 1.679 - - 0.708 - 0.971 - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
74. sart3 ENSDARG00000008032 2594 1.679 - 0.971 0.708 - - - - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
75. carhsp1 ENSDARG00000053129 2100 1.678 0.719 0.959 - - - - - - - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
76. C6H2orf40 C6H2orf40 4224 1.672 - - - - - 0.747 - - 0.925
77. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.669 - 0.935 - - - 0.734 - - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
78. st8sia2 ENSDARG00000018788 2183 1.661 - - - 0.791 - - - 0.870 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
79. cdca7a ENSDARG00000077620 9345 1.661 - 0.870 - - - - 0.791 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
80. CLSPN 2054 1.654 - - - 0.707 - - - - 0.947 claspin
81. pcyt2 ENSDARG00000043003 3506 1.653 - - - - - - 0.819 0.834 - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
82. cdk2ap2 ENSDARG00000103145 8024 1.65 - 0.820 - - 0.830 - - - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
83. SSBP4 ENSDARG00000056483 5156 1.649 - - 0.752 - - - - 0.897 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
84. hcfc1b ENSDARG00000012519 3633 1.649 - - 0.730 - - - - 0.919 - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
85. cbfa2t2 ENSDARG00000074337 4323 1.649 0.720 - - - 0.929 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
86. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.645 0.739 - - - 0.906 - - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
87. myo9b ENSDARG00000077410 1956 1.635 - - - - - - 0.822 0.813 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
88. zgc:194679 ENSDARG00000073723 1396 1.633 0.708 - - - 0.925 - - - - zgc:194679 [Source:ZFIN;Acc:ZDB-GENE-030131-2847]
89. rcn1 ENSDARG00000070006 8455 1.629 - 0.901 - - - - 0.728 - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
90. ebna1bp2 ENSDARG00000054980 4621 1.627 - - - - 0.914 - - 0.713 - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
91. npas3b npas3b 1446 1.622 - - 0.795 0.827 - - - - -
92. mbd3a ENSDARG00000061774 4047 1.622 - - - - - - 0.799 0.823 - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
93. msi1 ENSDARG00000010710 2634 1.62 - - 0.739 - 0.881 - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
94. snrpd3l ENSDARG00000076283 7655 1.618 - - - - 0.800 - - 0.818 - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
95. zgc:194839 ENSDARG00000078550 4003 1.617 - 0.817 - - - 0.800 - - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
96. shmt1 ENSDARG00000052816 5463 1.611 - - - - 0.850 - - 0.761 - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
97. foxp4 ENSDARG00000076120 9458 1.608 - - 0.718 - - - 0.890 - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
98. FGFBP3 FGFBP3 993 1.607 - - - 0.770 - - - 0.837 -
99. sdhdb ENSDARG00000030139 9761 1.605 - 0.840 - - 0.765 - - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
100. C17H15orf57 C17H15orf57 1366 1.601 - - - - - 0.774 - 0.827 -

There are 1523 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA