Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRGAP1

Gene Name Gene ID Reads Annotation
SRGAP1 ENSGALG00000009825 6753 SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]











Genes with expression patterns similar to SRGAP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRGAP1 ENSGALG00000009825 6753 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
2. UPF3B ENSGALG00000008618 12350 1.827 - - - - 0.965 - 0.862 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
3. PBRM1 ENSGALG00000037455 6450 1.769 - - - - 0.965 - 0.804 - - - polybromo 1 [Source:NCBI gene;Acc:396074]
4. SLC30A4 ENSGALG00000005703 5696 1.752 - - - - 0.955 - 0.797 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
5. PSMD3 ENSGALG00000033162 25615 1.746 - - - - 0.957 - 0.789 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
6. SLMO2 SLMO2 9207 1.745 - - - - 0.952 - 0.793 - - -
7. HSF2 ENSGALG00000038420 5259 1.716 - - - - 0.961 - 0.755 - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
8. NUP88 ENSGALG00000032280 9847 1.714 - - - - 0.954 - 0.760 - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
9. ZYX ENSGALG00000014688 8686 1.699 - - - - 0.945 - 0.754 - - - zyxin [Source:NCBI gene;Acc:418300]
10. SNX14 ENSGALG00000015831 2554 1.692 - - - - 0.963 - 0.729 - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
11. PRCC ENSGALG00000040696 9346 1.655 - - - - 0.954 - 0.701 - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
12. GSPT1 15580 1.649 - - - - 0.919 - 0.730 - - - G1 to S phase transition 1, transcript variant X1
13. CHMP5 ENSGALG00000013160 13347 1.641 - - - - 0.933 - 0.708 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
14. FBXW11 ENSGALG00000002229 5805 1.634 - - - - - - 0.873 0.761 - - F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
15. RAD23B ENSGALG00000015540 10828 1.633 - - - - 0.927 - 0.706 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
16. UQCRH ENSGALG00000017380 55734 1.61 - - - - 0.885 - 0.725 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
17. DDX27 ENSGALG00000006974 18388 1.561 - - - - 0.860 - 0.701 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
18. MAD2L1 ENSGALG00000011967 16125 1.555 - - - - 0.832 - 0.723 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
19. PSMC5 ENSGALG00000000349 21346 1.522 - - - - - - 0.768 0.754 - - proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:428274]
20. CSNK2A1 ENSGALG00000006197 41409 1.51 - - - - 0.726 - 0.784 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
21. KRIT1 ENSGALG00000042651 4486 1.469 - - - - - - 0.767 0.702 - - KRIT1, ankyrin repeat containing [Source:NCBI gene;Acc:420549]
22. KIF11 ENSGALG00000030597 5528 0.97 - - - - 0.970 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
23. WNK2 ENSGALG00000038850 4712 0.968 - - - - 0.968 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
24. DLD ENSGALG00000007931 11011 0.968 - - - - 0.968 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
25. PSMG3 ENSGALG00000004203 11240 0.968 - - - - 0.968 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
26. WDR92 ENSGALG00000008760 3934 0.968 - - - - 0.968 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
27. BRF1 ENSGALG00000011705 3406 0.966 - - - - 0.966 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
28. PITHD1 ENSGALG00000003986 11470 0.966 - - - - 0.966 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
29. GTF2H1 ENSGALG00000042340 1553 0.966 - - - - 0.966 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
30. DLL1 ENSGALG00000011182 1613 0.965 - - - - 0.965 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
31. LZIC ENSGALG00000002616 9052 0.965 - - - - 0.965 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
32. RBM6 ENSGALG00000035578 1690 0.965 - - - - 0.965 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
33. DENR ENSGALG00000003795 30805 0.965 - - - - 0.965 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
34. RALGDS ENSGALG00000003412 4478 0.965 - - - - 0.965 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
35. SDCBP ENSGALG00000015436 1228 0.964 - - - - 0.964 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
36. PTK2B ENSGALG00000016564 406 0.964 - - - - 0.964 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
37. PHTF1 ENSGALG00000001845 3276 0.964 - - - - 0.964 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
38. PRDM4 ENSGALG00000012619 876 0.963 - - - - 0.963 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
39. SMG7 ENSGALG00000004667 707 0.963 - - - - 0.963 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
40. RAMP3 ENSGALG00000037246 1187 0.963 - - - - 0.963 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
41. PREP2 PREP2 238 0.963 - - - - 0.963 - - - - -
42. ANKRD9 ENSGALG00000011376 525 0.963 - - - - 0.963 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
43. ENSGALG00000006569 ENSGALG00000006569 2169 0.963 - - - - 0.963 - - - - -
44. IARS2 ENSGALG00000009566 4599 0.962 - - - - 0.962 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
45. RBM34 ENSGALG00000029915 5618 0.962 - - - - 0.962 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
46. YARS ENSGALG00000003563 11093 0.962 - - - - 0.962 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
47. MED8 ENSGALG00000009993 3095 0.962 - - - - 0.962 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
48. ZC3H6 ENSGALG00000008269 10353 0.962 - - - - 0.962 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
49. SAP30 ENSGALG00000036252 2032 0.962 - - - - 0.962 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
50. TIMMDC1 ENSGALG00000024480 9337 0.962 - - - - 0.962 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
51. BAHD1 ENSGALG00000033675 1779 0.962 - - - - 0.962 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
52. MARC1 ENSGALG00000009453 5675 0.962 - - - - 0.962 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
53. ASAP2 ENSGALG00000016419 1393 0.962 - - - - 0.962 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
54. MYBL2 ENSGALG00000003503 15875 0.961 - - - - 0.961 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
55. TAF3 ENSGALG00000006731 15569 0.961 - - - - 0.961 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
56. C9orf85 ENSGALG00000026001 4110 0.961 - - - - 0.961 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
57. ETS1 ENSGALG00000001143 7284 0.961 - - - - 0.961 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
58. RAD54B ENSGALG00000043597 1699 0.96 - - - - 0.960 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
59. SYNE1 ENSGALG00000013505 2324 0.96 - - - - 0.960 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
60. FUNDC2 ENSGALG00000029585 9334 0.96 - - - - 0.960 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
61. MRPL16 ENSGALG00000029419 8033 0.96 - - - - 0.960 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
62. FNDC5 ENSGALG00000003567 3328 0.96 - - - - 0.960 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
63. TSPO2 ENSGALG00000003212 5141 0.959 - - - - 0.959 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
64. STARD3NL ENSGALG00000033038 4851 0.959 - - - - 0.959 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
65. ACAT2 ENSGALG00000011659 12825 0.959 - - - - 0.959 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
66. MED21 ENSGALG00000027435 5766 0.959 - - - - 0.959 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
67. CDKN1B ENSGALG00000022980 4606 0.959 - - - - 0.959 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
68. NDUFV1 ENSGALG00000042809 6222 0.959 - - - - 0.959 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
69. HARS ENSGALG00000035080 11602 0.958 - - - - 0.958 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
70. COQ5 ENSGALG00000007185 5614 0.957 - - - - 0.957 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
71. TMF1 ENSGALG00000013408 3344 0.957 - - - - 0.957 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
72. CCDC132 CCDC132 2632 0.957 - - - - 0.957 - - - - -
73. CDH3 5050 0.957 - - - - 0.957 - - - - - cadherin 3
74. ENSGALG00000027854 ENSGALG00000027854 5007 0.957 - - - - 0.957 - - - - -
75. DGKZ ENSGALG00000008380 5389 0.957 - - - - 0.957 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
76. LOC426385 ENSGALG00000026301 2703 0.956 - - - - 0.956 - - - - - serine/threonine kinase 35-like, transcript variant X2
77. LMAN2 ENSGALG00000033232 11740 0.956 - - - - 0.956 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
78. LGMN ENSGALG00000010811 7401 0.956 - - - - 0.956 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
79. EDNRA ENSGALG00000010013 2472 0.955 - - - - 0.955 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
80. GATC ENSGALG00000007195 8610 0.955 - - - - 0.955 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
81. CDCA7 ENSGALG00000040833 7484 0.954 - - - - 0.954 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
82. VMA21 ENSGALG00000009065 6432 0.953 - - - - 0.953 - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
83. UTP6 ENSGALG00000003260 4909 0.953 - - - - 0.953 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
84. SFXN5 ENSGALG00000016094 2678 0.951 - - - - 0.951 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
85. RHOT1 ENSGALG00000003397 5149 0.949 - - - - 0.949 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
86. SPRED1 ENSGALG00000028203 6520 0.948 - - - - 0.948 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
87. MEF2BNB MEF2BNB 5578 0.947 - - - - 0.947 - - - - -
88. NEK6 ENSGALG00000001118 20333 0.944 - - - - 0.944 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
89. SPEN ENSGALG00000036932 9688 0.944 - - - - 0.944 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
90. SH3BGR ENSGALG00000016127 2561 0.944 - - - - 0.944 - - - - - SH3 domain binding glutamate rich protein
91. COMMD2 ENSGALG00000028001 18981 0.941 - - - - 0.941 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
92. CENPP ENSGALG00000004687 6707 0.939 - - - - 0.939 - - - - - centromere protein P [Source:NCBI gene;Acc:415952]
93. LGALS1 ENSGALG00000012420 13993 0.939 - - - - 0.939 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
94. SRP19 ENSGALG00000000218 14207 0.937 - - - - 0.937 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
95. SEPHS1 ENSGALG00000014575 10701 0.937 - - - - 0.937 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
96. TM9SF3 ENSGALG00000005534 15290 0.936 - - - - 0.936 - - - - - transmembrane 9 superfamily member 3
97. RPL22 ENSGALG00000000719 74238 0.936 - - - - 0.936 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
98. MYO9A ENSGALG00000033618 4505 0.936 - - - - 0.936 - - - - - myosin IXA, transcript variant X10
99. KPNA2 ENSGALG00000003584 76058 0.935 - - - - 0.935 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
100. ENSGALG00000004931 ENSGALG00000004931 2737 0.934 - - - - - - - 0.934 - -

There are 349 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA