Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SREK1

Gene Name Gene ID Reads Annotation
SREK1 ENSGALG00000014775 13961 splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3











Genes with expression patterns similar to SREK1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SREK1 ENSGALG00000014775 13961 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
2. ZC3H6 ENSGALG00000008269 10353 1.751 - - - - 0.932 - 0.819 - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
3. KIF11 ENSGALG00000030597 5528 1.704 - - - - 0.928 - - 0.776 - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
4. PBRM1 ENSGALG00000037455 6450 1.668 - - - - 0.942 - - 0.726 - - polybromo 1 [Source:NCBI gene;Acc:396074]
5. SRP19 ENSGALG00000000218 14207 1.659 - - - - 0.892 - 0.767 - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
6. TIMMDC1 ENSGALG00000024480 9337 1.656 - - - - 0.929 - - 0.727 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
7. HSF2 ENSGALG00000038420 5259 1.653 - - - - 0.923 - - 0.730 - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
8. SLMO2 SLMO2 9207 1.65 - - - - 0.922 - - 0.728 - -
9. Mar-05 Mar-05 6330 1.628 - - - - 0.902 - 0.726 - - -
10. G3BP1 ENSGALG00000004160 36795 1.624 - - - - 0.854 - 0.770 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
11. MEF2BNB MEF2BNB 5578 1.619 - - - - 0.918 - - 0.701 - -
12. NUP37 ENSGALG00000012759 9985 1.597 - - - - - - 0.847 0.750 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
13. ELOVL5 ENSGALG00000016314 18163 1.582 - - - - 0.800 - 0.782 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
14. BLMH ENSGALG00000004259 36907 1.564 - - - - - - 0.779 0.785 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
15. EIF5B ENSGALG00000016764 30681 1.532 0.741 - - - - - - 0.791 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
16. ANAPC16 ENSGALG00000004410 18001 1.51 - - - - - - 0.773 0.737 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
17. RCN2 ENSGALG00000039284 17848 1.506 - - - - - - 0.708 0.798 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
18. AZIN1 ENSGALG00000029295 11085 1.498 - - - - - - 0.719 0.779 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
19. MAD2L1 ENSGALG00000011967 16125 1.493 - - - - 0.792 - 0.701 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
20. MRPS22 ENSGALG00000005367 8307 1.482 - - - - - - 0.759 0.723 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
21. DNAJB11 ENSGALG00000006564 9353 1.467 - - - - - - 0.761 0.706 - - DnaJ heat shock protein family (Hsp40) member B11
22. TRAPPC2L ENSGALG00000006250 21772 1.457 - - - - - - 0.739 0.718 - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
23. GRAMD4 ENSGALG00000034274 3826 1.456 - - - - - - 0.713 0.743 - - GRAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29113]
24. PARP1 ENSGALG00000009228 39433 1.425 0.717 - - - - - 0.708 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
25. TAF3 ENSGALG00000006731 15569 0.951 - - - - 0.951 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
26. PSMG3 ENSGALG00000004203 11240 0.941 - - - - 0.941 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
27. C9orf85 ENSGALG00000026001 4110 0.941 - - - - 0.941 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
28. UPF3B ENSGALG00000008618 12350 0.94 - - - - 0.940 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
29. SLC30A4 ENSGALG00000005703 5696 0.936 - - - - 0.936 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
30. FUNDC2 ENSGALG00000029585 9334 0.935 - - - - 0.935 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
31. ACAT2 ENSGALG00000011659 12825 0.935 - - - - 0.935 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
32. SPRED1 ENSGALG00000028203 6520 0.934 - - - - 0.934 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
33. SRGAP1 ENSGALG00000009825 6753 0.933 - - - - 0.933 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
34. MRPL16 ENSGALG00000029419 8033 0.932 - - - - 0.932 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
35. RALGDS ENSGALG00000003412 4478 0.932 - - - - 0.932 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
36. BASP1 ENSGALG00000012952 19549 0.931 - - - - 0.931 - - - - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
37. YBX1 ENSGALG00000004848 20992 0.931 - - - - 0.931 - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
38. ETS1 ENSGALG00000001143 7284 0.931 - - - - 0.931 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
39. BAHD1 ENSGALG00000033675 1779 0.931 - - - - 0.931 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
40. SYNE1 ENSGALG00000013505 2324 0.93 - - - - 0.930 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
41. PHTF1 ENSGALG00000001845 3276 0.93 - - - - 0.930 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
42. DLL1 ENSGALG00000011182 1613 0.93 - - - - 0.930 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
43. PITHD1 ENSGALG00000003986 11470 0.929 - - - - 0.929 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
44. NDUFV1 ENSGALG00000042809 6222 0.929 - - - - 0.929 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
45. DGKZ ENSGALG00000008380 5389 0.929 - - - - 0.929 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
46. PTK2B ENSGALG00000016564 406 0.929 - - - - 0.929 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
47. LZIC ENSGALG00000002616 9052 0.929 - - - - 0.929 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
48. ASAP2 ENSGALG00000016419 1393 0.928 - - - - 0.928 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
49. RBM34 ENSGALG00000029915 5618 0.928 - - - - 0.928 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
50. BRF1 ENSGALG00000011705 3406 0.928 - - - - 0.928 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
51. SFXN5 ENSGALG00000016094 2678 0.928 - - - - 0.928 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
52. RAD54B ENSGALG00000043597 1699 0.928 - - - - 0.928 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
53. SNX14 ENSGALG00000015831 2554 0.927 - - - - 0.927 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
54. VMA21 ENSGALG00000009065 6432 0.927 - - - - 0.927 - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
55. SDCBP ENSGALG00000015436 1228 0.927 - - - - 0.927 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
56. TMF1 ENSGALG00000013408 3344 0.927 - - - - 0.927 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
57. SAP30 ENSGALG00000036252 2032 0.927 - - - - 0.927 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
58. WDR92 ENSGALG00000008760 3934 0.926 - - - - 0.926 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
59. MED21 ENSGALG00000027435 5766 0.926 - - - - 0.926 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
60. ENSGALG00000006569 ENSGALG00000006569 2169 0.926 - - - - 0.926 - - - - -
61. YARS ENSGALG00000003563 11093 0.926 - - - - 0.926 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
62. LOC426385 ENSGALG00000026301 2703 0.926 - - - - 0.926 - - - - - serine/threonine kinase 35-like, transcript variant X2
63. PRDM4 ENSGALG00000012619 876 0.926 - - - - 0.926 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
64. NUP88 ENSGALG00000032280 9847 0.926 - - - - 0.926 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
65. PREP2 PREP2 238 0.925 - - - - 0.925 - - - - -
66. SMG7 ENSGALG00000004667 707 0.925 - - - - 0.925 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
67. RAMP3 ENSGALG00000037246 1187 0.925 - - - - 0.925 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
68. MED8 ENSGALG00000009993 3095 0.925 - - - - 0.925 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
69. ANKRD9 ENSGALG00000011376 525 0.924 - - - - 0.924 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
70. DLD ENSGALG00000007931 11011 0.924 - - - - 0.924 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
71. SPEN ENSGALG00000036932 9688 0.924 - - - - 0.924 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
72. LMAN2 ENSGALG00000033232 11740 0.924 - - - - 0.924 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
73. STARD3NL ENSGALG00000033038 4851 0.924 - - - - 0.924 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
74. LGMN ENSGALG00000010811 7401 0.923 - - - - 0.923 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
75. GTF2H1 ENSGALG00000042340 1553 0.923 - - - - 0.923 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
76. FNDC5 ENSGALG00000003567 3328 0.923 - - - - 0.923 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
77. PRCC ENSGALG00000040696 9346 0.923 - - - - 0.923 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
78. HARS ENSGALG00000035080 11602 0.923 - - - - 0.923 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
79. UTP6 ENSGALG00000003260 4909 0.922 - - - - 0.922 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
80. GATC ENSGALG00000007195 8610 0.922 - - - - 0.922 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
81. RBM6 ENSGALG00000035578 1690 0.922 - - - - 0.922 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
82. SEPHS1 ENSGALG00000014575 10701 0.922 - - - - 0.922 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
83. DENR ENSGALG00000003795 30805 0.922 - - - - 0.922 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
84. IARS2 ENSGALG00000009566 4599 0.921 - - - - 0.921 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
85. MARC1 ENSGALG00000009453 5675 0.92 - - - - 0.920 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
86. COQ5 ENSGALG00000007185 5614 0.92 - - - - 0.920 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
87. EDNRA ENSGALG00000010013 2472 0.92 - - - - 0.920 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
88. CDH3 5050 0.919 - - - - 0.919 - - - - - cadherin 3
89. ENSGALG00000027854 ENSGALG00000027854 5007 0.919 - - - - 0.919 - - - - -
90. CDKN1B ENSGALG00000022980 4606 0.919 - - - - 0.919 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
91. PSMD3 ENSGALG00000033162 25615 0.919 - - - - 0.919 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
92. MYBL2 ENSGALG00000003503 15875 0.917 - - - - 0.917 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
93. RAD23B ENSGALG00000015540 10828 0.916 - - - - 0.916 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
94. CCDC132 CCDC132 2632 0.916 - - - - 0.916 - - - - -
95. ZYX ENSGALG00000014688 8686 0.915 - - - - 0.915 - - - - - zyxin [Source:NCBI gene;Acc:418300]
96. WNK2 ENSGALG00000038850 4712 0.914 - - - - 0.914 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
97. TM9SF3 ENSGALG00000005534 15290 0.914 - - - - 0.914 - - - - - transmembrane 9 superfamily member 3
98. TSPO2 ENSGALG00000003212 5141 0.914 - - - - 0.914 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
99. CHMP5 ENSGALG00000013160 13347 0.911 - - - - 0.911 - - - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
100. CDCA7 ENSGALG00000040833 7484 0.911 - - - - 0.911 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]

There are 528 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA