Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRBD1

Gene Name Gene ID Reads Annotation
SRBD1 ENSGALG00000009990 4568 S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]











Genes with expression patterns similar to SRBD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRBD1 ENSGALG00000009990 4568 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
2. FAM177A1 ENSGALG00000010046 4318 2.273 - - - - - 0.783 0.760 0.730 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
3. CHRAC1 ENSGALG00000040823 5695 2.257 - - 0.721 - - - 0.754 0.782 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
4. UFL1 ENSGALG00000015580 3845 2.164 - - 0.707 - - 0.737 - 0.720 - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
5. CTDSPL2 ENSGALG00000008199 3534 1.589 - - - - - - 0.839 0.750 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
6. INCENP ENSGALG00000007537 16617 1.589 - - - - - - 0.749 0.840 - - inner centromere protein [Source:NCBI gene;Acc:396270]
7. RCN2 ENSGALG00000039284 17848 1.585 - - - - - - 0.757 0.828 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
8. DNAL4 ENSGALG00000043451 4469 1.578 - - - - - - 0.760 0.818 - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
9. REXO5 ENSGALG00000002239 2466 1.57 - - - - - - 0.764 0.806 - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
10. NDUFA12 ENSGALG00000011325 19807 1.567 - - - - - - 0.785 0.782 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
11. DDX20 ENSGALG00000001504 3367 1.555 - - - - - - 0.775 0.780 - - DEAD-box helicase 20 [Source:HGNC Symbol;Acc:HGNC:2743]
12. ADI1 ENSGALG00000025796 8636 1.552 - - - - - - 0.772 0.780 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
13. SPCS1 ENSGALG00000001655 7718 1.55 - - - - - - 0.784 0.766 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
14. FAM18B1 ENSGALG00000001335 5177 1.55 - - - - - - 0.710 0.840 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
15. SEC22A ENSGALG00000011697 7981 1.547 - - - - - - 0.735 0.812 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
16. DDX59 ENSGALG00000002164 3314 1.527 - - - - - 0.764 - 0.763 - - DEAD-box helicase 59 [Source:HGNC Symbol;Acc:HGNC:25360]
17. RRP1B ENSGALG00000035696 12309 1.515 - - - - - - 0.715 0.800 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
18. BLMH ENSGALG00000004259 36907 1.513 - - - - - - 0.701 0.812 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
19. NUP50 ENSGALG00000014222 11743 1.51 - - - - - - 0.808 0.702 - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
20. HCCS ENSGALG00000005571 4939 1.495 - - - - - - 0.707 0.788 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
21. ENSGALG00000004127 ENSGALG00000004127 566 1.488 - - 0.719 - - 0.769 - - - -
22. BZW2 ENSGALG00000010809 29213 1.487 - - 0.724 - - - - 0.763 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
23. TTC3 ENSGALG00000016050 4115 1.478 - - - - - 0.735 0.743 - - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
24. PLAA ENSGALG00000001782 5459 1.477 - - - - - - 0.762 0.715 - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
25. RBMX ENSGALG00000006457 34009 1.47 - - - - - 0.743 0.727 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
26. CPD ENSGALG00000004295 8199 1.47 - - - - - - 0.757 0.713 - - carboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]
27. CYB5R2 ENSGALG00000032372 7967 1.469 - - - - - 0.711 0.758 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
28. STRADA ENSGALG00000000550 6912 1.467 - - - - - - 0.766 0.701 - - STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
29. RIOK2 ENSGALG00000015288 6280 1.465 - - - - - - 0.707 0.758 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
30. GPR161 ENSGALG00000015247 3473 1.465 - - - - - - 0.734 0.731 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
31. GPBP1 ENSGALG00000014724 5454 1.46 - - - - - 0.753 0.707 - - - GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]
32. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 1.452 - - - - - 0.721 0.731 - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
33. PRKACB ENSGALG00000028530 12506 1.452 - - - - - 0.716 - 0.736 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
34. UBFD1 ENSGALG00000006117 5242 1.447 - - - - - - 0.714 0.733 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
35. FKBP7 ENSGALG00000009149 6742 1.431 - - - - - - 0.713 0.718 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
36. RAB18 ENSGALG00000007435 3589 1.431 - - - - - - 0.723 0.708 - - RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
37. CDC42BPB ENSGALG00000011432 8220 1.427 - - - - - - 0.706 0.721 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
38. CNI CNI 18453 1.421 - - - - - - 0.702 0.719 - -
39. PHF5A ENSGALG00000011953 2395 1.413 - - - - - - 0.704 0.709 - - PHD finger protein 5A [Source:NCBI gene;Acc:417991]
40. SLC12A4 ENSGALG00000034179 5674 0.885 - - - - - - - 0.885 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
41. NUDT7 ENSGALG00000034395 7396 0.878 - - - - - - - 0.878 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
42. RARS ENSGALG00000001850 23283 0.877 - - - - - - 0.877 - - - arginyl-tRNA synthetase [Source:NCBI gene;Acc:416168]
43. CADPS2 ENSGALG00000008926 398 0.874 - - - - - 0.874 - - - - calcium dependent secretion activator 2 [Source:HGNC Symbol;Acc:HGNC:16018]
44. CDH3 5050 0.862 - - 0.862 - - - - - - - cadherin 3
45. HSCB ENSGALG00000005706 12953 0.86 - - - - - - - 0.860 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
46. OPA1 ENSGALG00000007150 5488 0.859 - - - - - - 0.859 - - - OPA1, mitochondrial dynamin like GTPase [Source:NCBI gene;Acc:424900]
47. EMG1 ENSGALG00000014568 8102 0.856 - - - - - - 0.856 - - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
48. BTG2 ENSGALG00000026858 6716 0.855 - - 0.855 - - - - - - - BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]
49. XBP1 ENSGALG00000005796 14007 0.849 - - - - - - - 0.849 - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
50. GTF3C4 ENSGALG00000031016 1221 0.849 - - - - - 0.849 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
51. DAD1 ENSGALG00000035626 32604 0.847 - - - - - - - 0.847 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
52. RAC3 ENSGALG00000040606 355 0.846 - - - - - 0.846 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
53. PCNT ENSGALG00000007021 6428 0.846 - - - - - - - 0.846 - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
54. ENSGALG00000001861 ENSGALG00000001861 10150 0.845 - - - - - - - 0.845 - -
55. ARFIP1 ENSGALG00000041361 7351 0.844 - - - - - - - 0.844 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
56. ADRM1 ENSGALG00000005200 5417 0.844 - - - - - - - 0.844 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
57. PTPMT1 ENSGALG00000008091 6160 0.844 - - - - - - - 0.844 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
58. CARS ENSGALG00000006427 7660 0.843 - - - - - - 0.843 - - - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]
59. TRAPPC2 ENSGALG00000016578 8749 0.843 - - - - - - 0.843 - - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
60. B4GAL-T7 B4GAL-T7 12356 0.843 - - - - - - - 0.843 - -
61. DDI2 115 0.843 - - - - - 0.843 - - - - DNA damage inducible 1 homolog 2, transcript variant X2
62. TERF1 ENSGALG00000037453 4497 0.842 - - - - - 0.842 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
63. SNX7 ENSGALG00000005478 4736 0.838 - - - - - - - 0.838 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
64. ETFDH ENSGALG00000009442 7671 0.838 - - 0.838 - - - - - - - electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
65. RFC1 ENSGALG00000014298 6516 0.837 - - - - - - - 0.837 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
66. NEDD1 ENSGALG00000031699 3634 0.837 - - - - - - - 0.837 - - neural precursor cell expressed, developmentally down-regulated 1 [Source:NCBI gene;Acc:417922]
67. CLASP1 ENSGALG00000011645 1378 0.835 - - - - - 0.835 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
68. LOC419851 ENSGALG00000023953 80 0.834 - - - - - 0.834 - - - - complement component 4 binding protein, alpha chain
69. GPD1L2 ENSGALG00000012061 31 0.834 - - - - - 0.834 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
70. OLFML1 ENSGALG00000027184 19 0.834 - - - - - 0.834 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
71. NAA20 ENSGALG00000012587 11349 0.833 - - - - - - - 0.833 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
72. SH2D1B ENSGALG00000028448 17 0.833 - - - - - 0.833 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
73. KIF7 ENSGALG00000006611 33 0.833 - - - - - 0.833 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
74. NIPAL4 ENSGALG00000039687 29 0.833 - - - - - 0.833 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
75. HJURP ENSGALG00000015363 54 0.832 - - - - - 0.832 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
76. PLK1 ENSGALG00000006110 12892 0.832 - - - - - - - 0.832 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
77. USE1 ENSGALG00000003703 4680 0.832 - - - - - - - 0.832 - - unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
78. AQP1 ENSGALG00000005209 111 0.831 - - - - - 0.831 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
79. BNIP3L ENSGALG00000043405 10316 0.831 - - - - - - 0.831 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
80. ENSGALG00000002946 ENSGALG00000002946 56 0.83 - - - - - 0.830 - - - -
81. PACSIN2 ENSGALG00000014159 601 0.83 - - - - - 0.830 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
82. ADNP2 ENSGALG00000035669 318 0.829 - - - - - 0.829 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
83. BPNT1 ENSGALG00000009576 7445 0.829 - - - - - - - 0.829 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
84. KLHL40 ENSGALG00000005292 61 0.828 - - - - - 0.828 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
85. SERPINB1 ENSGALG00000019555 29 0.828 - - - - - 0.828 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
86. DSCR3 3583 0.828 - - - - - - - 0.828 - - DSCR3 arrestin fold containing, transcript variant X1
87. VRK2 ENSGALG00000032770 117 0.827 - - - - - 0.827 - - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
88. C1orf168 C1orf168 98 0.827 - - - - - 0.827 - - - -
89. PRKDC ENSGALG00000042469 449 0.826 - - - - - 0.826 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
90. SERPINF2 ENSGALG00000002987 236 0.826 - - - - - 0.826 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
91. MCC ENSGALG00000000208 61 0.825 - - - - - 0.825 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
92. POLB ENSGALG00000040828 7462 0.825 - - - - - 0.825 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
93. ACN9 ACN9 269 0.824 - - - - - 0.824 - - - -
94. TDP2 ENSGALG00000013637 6595 0.824 - - - - - - - 0.824 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
95. DRD4 ENSGALG00000040761 79 0.824 - - - - - 0.824 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
96. LRRC57 ENSGALG00000009112 1443 0.824 - - - - - 0.824 - - - - leucine rich repeat containing 57 [Source:NCBI gene;Acc:423236]
97. PEF1 ENSGALG00000040519 8522 0.823 - - - - - - 0.823 - - - penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]
98. GYPC ENSGALG00000011566 99 0.823 - - - - - 0.823 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
99. PI4KA ENSGALG00000040756 3973 0.823 - - - - - - 0.823 - - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
100. DCPS ENSGALG00000031143 10191 0.823 - - - - - - - 0.823 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]

There are 793 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA