Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SRA1

Gene Name Gene ID Reads Annotation
SRA1 ENSGALG00000040453 266 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]











Genes with expression patterns similar to SRA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SRA1 ENSGALG00000040453 266 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
2. BSDC1 ENSGALG00000003405 3701 2.561 - - - - - 0.767 0.937 - - 0.857 BSD domain containing 1 [Source:NCBI gene;Acc:419658]
3. DTX2 ENSGALG00000001905 1475 1.946 - - - - - - 0.996 - - 0.950 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
4. TTI1 ENSGALG00000006791 1218 1.929 - - - - - - 0.976 - - 0.953 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
5. MITF ENSGALG00000039583 865 1.9 - - - - - - 0.963 - - 0.937 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
6. IWS1 ENSGALG00000001803 2305 1.813 - - - - - - 0.983 - - 0.830 IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
7. RFFL ENSGALG00000002225 928 1.812 - - - - - - 0.976 - - 0.836 ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
8. GADD45 GADD45 8780 1.755 - - - - - - 0.958 - - 0.797
9. ATL1 ENSGALG00000012339 3789 1.752 - - - - - - 0.900 - - 0.852 atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
10. GARNL3 ENSGALG00000000847 3423 1.682 - - - - - - 0.854 - - 0.828 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
11. WWC1 ENSGALG00000001826 4666 1.675 - - - - - - 0.783 - - 0.892 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
12. CALCOCO2 ENSGALG00000001525 3121 1.616 - - - - - - 0.810 - - 0.806 calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
13. PDCD2L 4843 1.602 - - - - - - 0.723 - - 0.879 programmed cell death 2-like
14. NNT ENSGALG00000014869 8496 1.576 - - - - - - 0.863 - - 0.713 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
15. WDR12 ENSGALG00000008470 7654 1.499 - - - - - - 0.759 - - 0.740 WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
16. KLF11 ENSGALG00000016440 65 1 - - - - - - 1.000 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
17. PIGF ENSGALG00000020057 201 0.999 - - - - - - 0.999 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
18. TP53BP1 ENSGALG00000042201 708 0.998 - - - - - - 0.998 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
19. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.997 - - - - - - 0.997 - - - pseudouridylate synthase-like 1, transcript variant X8
20. PTDSS2 ENSGALG00000004300 682 0.997 - - - - - - 0.997 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
21. SLC28A3 ENSGALG00000012593 131 0.997 - - - - - - 0.997 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
22. BCAR3 358 0.996 - - - - - - 0.996 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
23. C7orf63 C7orf63 147 0.996 - - - - - - 0.996 - - -
24. LPXN 133 0.996 - - - - - - 0.996 - - - leupaxin, transcript variant X4
25. BBS4 ENSGALG00000001798 667 0.993 - - - - - - 0.993 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
26. C7orf55 C7orf55 7083 0.991 - - - - - - 0.991 - - -
27. CLK3 ENSGALG00000001362 2171 0.989 - - - - - - 0.989 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
28. WHSC1 1712 0.989 - - - - - - 0.989 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
29. ARHGEF3 ENSGALG00000005481 683 0.988 - - - - - - 0.988 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
30. PIGL ENSGALG00000004492 669 0.988 - - - - - - 0.988 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
31. TNFRSF11B ENSGALG00000043167 911 0.987 - - - - - - 0.987 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
32. FXYD6 ENSGALG00000025937 4073 0.985 - - - - - - 0.985 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
33. YWHAQ ENSGALG00000016433 3450 0.982 - - - - - - 0.982 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
34. ASTN2 ENSGALG00000007038 1748 0.982 - - - - - - 0.982 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
35. CLASP1 ENSGALG00000011645 1378 0.98 - - - - - - 0.980 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
36. LRR1 ENSGALG00000012230 1062 0.98 - - - - - - 0.980 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
37. MRM1 ENSGALG00000039523 2009 0.979 - - - - - - 0.979 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
38. MYH15 ENSGALG00000015358 6304 0.977 - - - - - - 0.977 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
39. TUFT1 ENSGALG00000032955 1317 0.976 - - - - - - 0.976 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
40. C11H19ORF12 C11H19ORF12 5149 0.975 - - - - - - 0.975 - - -
41. HYAL1 ENSGALG00000000785 1778 0.974 - - - - - - 0.974 - - - hyaluronoglucosaminidase 1, transcript variant X3
42. LUZP1 ENSGALG00000025858 947 0.973 - - - - - - - - - 0.973 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
43. PRDM10 632 0.973 - - - - - - 0.973 - - - PR domain 10, transcript variant X10
44. FDFT1 ENSGALG00000016665 3053 0.971 - - - - - - 0.971 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
45. LMX1A ENSGALG00000003424 335 0.971 - - - - - - 0.971 - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
46. COL17A1 ENSGALG00000029617 167 0.968 - - - - - - 0.968 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
47. PERP PERP 734 0.968 - - - - - - - - - 0.968
48. C5orf24 ENSGALG00000006371 1573 0.967 - - - - - - - - - 0.967 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
49. ANGPTL2 ENSGALG00000000927 2580 0.967 - - - - - - 0.967 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
50. ESCO1 ENSGALG00000014936 739 0.967 - - - - - - 0.967 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
51. RAB34 ENSGALG00000026315 1193 0.966 - - - - - - - - - 0.966 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
52. THOC3 ENSGALG00000024172 7617 0.963 - - - - - - 0.963 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
53. SUMF1 ENSGALG00000008286 941 0.962 - - - - - - 0.962 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
54. EFNB1 ENSGALG00000036539 2706 0.962 - - - - - - 0.962 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
55. OSBPL1A ENSGALG00000015086 2702 0.962 - - - - - - 0.962 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
56. MAP3K3 ENSGALG00000000525 115 0.961 - - - - - - - - - 0.961 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
57. TM6SF2 ENSGALG00000029015 109 0.961 - - - - - - - - - 0.961 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
58. MAP3K8 ENSGALG00000007356 188 0.96 - - - - - - - - - 0.960 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
59. TRIP4 ENSGALG00000030672 1255 0.96 - - - - - - - - - 0.960 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
60. UBE3C ENSGALG00000006461 57 0.96 - - - - - - - - - 0.960 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
61. BTBD7 4136 0.959 - - - - - - 0.959 - - - BTB domain containing 7, transcript variant X2
62. ZNF830 ENSGALG00000013156 3896 0.959 - - - - - - 0.959 - - - zinc finger protein 830
63. PDCD4 ENSGALG00000008700 574 0.959 - - - - - - - - - 0.959 programmed cell death 4 [Source:NCBI gene;Acc:374191]
64. SOS2 ENSGALG00000012273 41 0.958 - - - - - - - - - 0.958 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
65. APCDD1 ENSGALG00000000894 1482 0.958 - - - - - - 0.958 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
66. CNKSR3 ENSGALG00000027159 41 0.958 - - - - - - - - - 0.958 CNKSR family member 3, transcript variant X2
67. SDK1 ENSGALG00000004420 571 0.957 - - - - - - 0.957 - - - sidekick cell adhesion molecule 1 [Source:NCBI gene;Acc:373894]
68. ENSGALG00000008594 ENSGALG00000008594 54 0.957 - - - - - - - - - 0.957
69. ATP2B2 ENSGALG00000030908 584 0.957 - - - - - - - - - 0.957 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
70. ADAMTS12 55 0.957 - - - - - - - - - 0.957 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
71. ENSGALG00000018358 ENSGALG00000018358 101 0.957 - - - - - - - - - 0.957
72. EML1 1941 0.956 - - - - - - 0.956 - - - echinoderm microtubule associated protein like 1, transcript variant X11
73. NRCAM ENSGALG00000009514 490 0.956 - - - - - - 0.956 - - - neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
74. TYSND1 ENSGALG00000033807 716 0.955 - - - - - - - - - 0.955 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
75. ENSGALG00000004772 ENSGALG00000004772 173 0.955 - - - - - - - - - 0.955
76. GRPEL2 ENSGALG00000002673 105 0.955 - - - - - - - - - 0.955 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
77. RGP1 ENSGALG00000002394 5937 0.955 - - - - - - - - - 0.955 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
78. AGMO ENSGALG00000010792 76 0.955 - - - - - - - - - 0.955 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
79. FN3K ENSGALG00000001531 208 0.954 - - - - - - - - - 0.954 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
80. PTPRE ENSGALG00000009823 250 0.954 - - - - - - - - - 0.954 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
81. NUDCD1 ENSGALG00000040879 2965 0.953 - - - - - - 0.953 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
82. SLC38A1 ENSGALG00000009698 566 0.952 - - - - - - - - - 0.952 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
83. VAV2 ENSGALG00000002699 503 0.952 - - - - - - - - - 0.952 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
84. SLC25A48 ENSGALG00000006341 2606 0.952 - - - - - - 0.952 - - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
85. C9orf85 ENSGALG00000026001 4110 0.951 - - - - - - 0.951 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
86. SERPINB6 ENSGALG00000012866 1582 0.951 - - - - - - - - - 0.951 serpin family B member 6 [Source:NCBI gene;Acc:420895]
87. ENSGALG00000027621 ENSGALG00000027621 863 0.95 - - - - - - - - - 0.950
88. COL22A1 ENSGALG00000038022 544 0.95 - - - - - - 0.950 - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
89. BCOR ENSGALG00000016245 85 0.949 - - - - - - - - - 0.949 BCL6 corepressor, transcript variant X8
90. GPR114 GPR114 46 0.949 - - - - - - - - - 0.949
91. STX6 3297 0.949 - - - - - - - - - 0.949 syntaxin 6
92. PROCR ENSGALG00000006547 645 0.948 - - - - - - - - - 0.948 protein C receptor [Source:NCBI gene;Acc:424867]
93. NFKBIE ENSGALG00000044525 633 0.948 - - - - - - - - - 0.948 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
94. SLAIN1 ENSGALG00000016913 461 0.947 - - - - - - 0.947 - - - SLAIN motif family member 1 [Source:HGNC Symbol;Acc:HGNC:26387]
95. ZFPM2 ENSGALG00000040079 942 0.947 - - - - - - - - - 0.947 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
96. INPP5B ENSGALG00000001606 458 0.946 - - - - - - - - - 0.946 inositol polyphosphate-5-phosphatase B [Source:HGNC Symbol;Acc:HGNC:6077]
97. AP1S3 ENSGALG00000005171 2981 0.946 - - - - - - 0.946 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
98. TFG ENSGALG00000015299 849 0.946 - - - - - - - - - 0.946 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
99. NAPEPLD ENSGALG00000008285 1295 0.945 - - - - - - 0.945 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
100. TRIM3 ENSGALG00000034004 110 0.945 - - - - - - - - - 0.945 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]

There are 581 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA