Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SQSTM1

Gene Name Gene ID Reads Annotation
SQSTM1 ENSGALG00000035804 2238 sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]











Genes with expression patterns similar to SQSTM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SQSTM1 ENSGALG00000035804 2238 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
2. MYEOV2 MYEOV2 5155 1.646 - - - - - - 0.911 0.735 - -
3. ZDHHC13 ENSGALG00000004085 1802 1.64 - - - - - - 0.909 0.731 - - zinc finger DHHC-type containing 13 [Source:NCBI gene;Acc:422980]
4. DDX42 ENSGALG00000000581 8780 1.613 - - - - - - 0.894 0.719 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
5. PANK1 ENSGALG00000006431 2910 1.582 - - - - - - 0.867 0.715 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
6. PLEKHA5 ENSGALG00000013134 3656 1.582 - - - - - - 0.851 0.731 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
7. GSKIP ENSGALG00000011088 3421 1.58 - - - - - - 0.779 0.801 - - GSK3B interacting protein [Source:NCBI gene;Acc:423442]
8. WWC1 ENSGALG00000001826 4666 1.554 - - - - - - 0.804 0.750 - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
9. INTS6L ENSGALG00000006157 2303 1.517 - - - - - - 0.747 0.770 - - integrator complex subunit 6 like, transcript variant X6
10. WWC3 ENSGALG00000034834 9392 1.515 - - - - - - 0.776 0.739 - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
11. LPCAT3 ENSGALG00000014570 7919 1.424 - - - - - - 0.718 0.706 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
12. MPP1 ENSGALG00000005071 3865 1.421 - - - - - - 0.711 0.710 - - membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
13. BEND5 ENSGALG00000010505 3298 0.946 - - - - - - 0.946 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
14. HYAL1 ENSGALG00000000785 1778 0.946 - - - - - - 0.946 - - - hyaluronoglucosaminidase 1, transcript variant X3
15. THOC3 ENSGALG00000024172 7617 0.941 - - - - - - 0.941 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
16. TNFRSF11B ENSGALG00000043167 911 0.937 - - - - - - 0.937 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
17. CLASP1 ENSGALG00000011645 1378 0.931 - - - - - - 0.931 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
18. USP25 ENSGALG00000015693 2567 0.931 - - - - - - 0.931 - - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
19. C11H19ORF12 C11H19ORF12 5149 0.93 - - - - - - 0.930 - - -
20. CLK3 ENSGALG00000001362 2171 0.93 - - - - - - 0.930 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
21. ARHGEF3 ENSGALG00000005481 683 0.93 - - - - - - 0.930 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
22. ACTR10 ENSGALG00000012041 2752 0.93 - - - - - - 0.930 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
23. PYCR1 ENSGALG00000007300 7987 0.929 - - - - - - 0.929 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
24. AP1S3 ENSGALG00000005171 2981 0.929 - - - - - - 0.929 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
25. BTBD7 4136 0.927 - - - - - - 0.927 - - - BTB domain containing 7, transcript variant X2
26. GADD45 GADD45 8780 0.925 - - - - - - 0.925 - - -
27. TUFT1 ENSGALG00000032955 1317 0.924 - - - - - - 0.924 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
28. LMO4 ENSGALG00000006252 3686 0.923 - - - - - - 0.923 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
29. CAPN1 ENSGALG00000041685 4011 0.923 - - - - - - 0.923 - - - calpain 1 [Source:NCBI gene;Acc:693249]
30. C9H21ORF2 C9H21ORF2 3161 0.922 - - - - - - 0.922 - - -
31. CYTL1 ENSGALG00000015015 4438 0.922 - - - - - - 0.922 - - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
32. DTX2 ENSGALG00000001905 1475 0.921 - - - - - - 0.921 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
33. ZNF830 ENSGALG00000013156 3896 0.92 - - - - - - 0.920 - - - zinc finger protein 830
34. LRR1 ENSGALG00000012230 1062 0.92 - - - - - - 0.920 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
35. EML1 1941 0.919 - - - - - - 0.919 - - - echinoderm microtubule associated protein like 1, transcript variant X11
36. BBS4 ENSGALG00000001798 667 0.919 - - - - - - 0.919 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
37. FREM3 ENSGALG00000020561 1824 0.919 - - - - - - 0.919 - - - FRAS1 related extracellular matrix 3
38. LPXN 133 0.919 - - - - - - 0.919 - - - leupaxin, transcript variant X4
39. PIGF ENSGALG00000020057 201 0.918 - - - - - - 0.918 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
40. MYH15 ENSGALG00000015358 6304 0.918 - - - - - - 0.918 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
41. C7orf55 C7orf55 7083 0.918 - - - - - - 0.918 - - -
42. APCDD1 ENSGALG00000000894 1482 0.918 - - - - - - 0.918 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
43. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.916 - - - - - - 0.916 - - - pseudouridylate synthase-like 1, transcript variant X8
44. TP53BP1 ENSGALG00000042201 708 0.916 - - - - - - 0.916 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
45. FXYD6 ENSGALG00000025937 4073 0.916 - - - - - - 0.916 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
46. C9orf85 ENSGALG00000026001 4110 0.915 - - - - - - 0.915 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
47. COL17A1 ENSGALG00000029617 167 0.915 - - - - - - 0.915 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
48. RHOT2 ENSGALG00000002497 1744 0.915 - - - - - - 0.915 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
49. TBC1D12 ENSGALG00000034044 5588 0.915 - - - - - - 0.915 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
50. SEL1L3 ENSGALG00000039549 1400 0.915 - - - - - - 0.915 - - - SEL1L family member 3 [Source:HGNC Symbol;Acc:HGNC:29108]
51. MTFR1L ENSGALG00000000998 3457 0.914 - - - - - - 0.914 - - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
52. YWHAQ ENSGALG00000016433 3450 0.913 - - - - - - 0.913 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
53. AP1AR ENSGALG00000028807 2398 0.913 - - - - - - 0.913 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
54. ASTN2 ENSGALG00000007038 1748 0.913 - - - - - - 0.913 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
55. SRA1 ENSGALG00000040453 266 0.911 - - - - - - 0.911 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
56. SLC28A3 ENSGALG00000012593 131 0.911 - - - - - - 0.911 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
57. ETV5 ENSGALG00000005768 9679 0.911 - - - - - - 0.911 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
58. RFFL ENSGALG00000002225 928 0.911 - - - - - - 0.911 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
59. MRPL23 ENSGALG00000006561 13737 0.911 - - - - - - 0.911 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
60. ANXA11 ENSGALG00000043826 5189 0.911 - - - - - - 0.911 - - - annexin A11 [Source:NCBI gene;Acc:423637]
61. EFNB1 ENSGALG00000036539 2706 0.911 - - - - - - 0.911 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
62. PTDSS2 ENSGALG00000004300 682 0.91 - - - - - - 0.910 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
63. KLF11 ENSGALG00000016440 65 0.91 - - - - - - 0.910 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
64. WHSC1 1712 0.909 - - - - - - 0.909 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
65. BCAR3 358 0.908 - - - - - - 0.908 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
66. PPIL2 ENSGALG00000042052 4349 0.908 - - - - - - 0.908 - - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]
67. PRDM10 632 0.908 - - - - - - 0.908 - - - PR domain 10, transcript variant X10
68. ANGPTL2 ENSGALG00000000927 2580 0.907 - - - - - - 0.907 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
69. C7orf63 C7orf63 147 0.906 - - - - - - 0.906 - - -
70. CLN6 ENSGALG00000007981 5656 0.906 - - - - - - 0.906 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
71. C12orf66 ENSGALG00000027682 2110 0.905 - - - - - - 0.905 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
72. IWS1 ENSGALG00000001803 2305 0.904 - - - - - - 0.904 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
73. UHMK1 ENSGALG00000002734 2308 0.904 - - - - - - 0.904 - - - U2AF homology motif kinase 1 [Source:HGNC Symbol;Acc:HGNC:19683]
74. LYRM4 ENSGALG00000027339 2917 0.903 - - - - - - 0.903 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
75. MRM1 ENSGALG00000039523 2009 0.902 - - - - - - 0.902 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
76. TAF1B ENSGALG00000016437 2318 0.901 - - - - - - 0.901 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
77. BUD13_1 ENSGALG00000025882 1118 0.901 - - - - - - 0.901 - - - BUD13 homolog [Source:NCBI gene;Acc:428248]
78. PIGL ENSGALG00000004492 669 0.9 - - - - - - 0.900 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
79. REXO4 ENSGALG00000030609 2926 0.899 - - - - - - 0.899 - - - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
80. NARFL ENSGALG00000005365 2668 0.898 - - - - - - 0.898 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
81. RNF144A ENSGALG00000028709 2855 0.898 - - - - - - 0.898 - - - ring finger protein 144A, transcript variant X1
82. NUDCD1 ENSGALG00000040879 2965 0.898 - - - - - - 0.898 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
83. FDFT1 ENSGALG00000016665 3053 0.897 - - - - - - 0.897 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
84. TMEM14A ENSGALG00000019894 5279 0.897 - - - - - - 0.897 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
85. ZBTB26 ENSGALG00000042762 1920 0.897 - - - - - - 0.897 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
86. COG4 ENSGALG00000002603 4485 0.897 - - - - - - 0.897 - - - component of oligomeric golgi complex 4 [Source:NCBI gene;Acc:415681]
87. C1GALT1 ENSGALG00000009752 7148 0.896 - - - - - - 0.896 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
88. ESCO1 ENSGALG00000014936 739 0.896 - - - - - - 0.896 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
89. GNE ENSGALG00000015331 1577 0.895 - - - - - - 0.895 - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
90. LIG3 ENSGALG00000002288 7198 0.895 - - - - - - 0.895 - - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
91. SUMF1 ENSGALG00000008286 941 0.895 - - - - - - 0.895 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
92. ARL6IP4 ENSGALG00000003682 2467 0.895 - - - - - - 0.895 - - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
93. OSBPL1A ENSGALG00000015086 2702 0.895 - - - - - - 0.895 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
94. TMEM33 ENSGALG00000014248 6069 0.893 - - - - - - 0.893 - - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
95. GARNL3 ENSGALG00000000847 3423 0.892 - - - - - - 0.892 - - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
96. NFRKB ENSGALG00000001306 4469 0.892 - - - - - - 0.892 - - - nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
97. COG7 ENSGALG00000006156 4072 0.891 - - - - - - 0.891 - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
98. MITF ENSGALG00000039583 865 0.891 - - - - - - 0.891 - - - melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
99. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.891 - - - - - - 0.891 - - -
100. SLC6A15 ENSGALG00000010992 2837 0.891 - - - - - - 0.891 - - - solute carrier family 6 member 15 [Source:HGNC Symbol;Acc:HGNC:13621]

There are 266 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA