Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SQLE

Gene Name Gene ID Reads Annotation
SQLE ENSGALG00000036915 4172 squalene epoxidase [Source:NCBI gene;Acc:420335]











Genes with expression patterns similar to SQLE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SQLE ENSGALG00000036915 4172 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 squalene epoxidase [Source:NCBI gene;Acc:420335]
2. RRN3 ENSGALG00000041989 3934 1.844 - - 0.875 - - - - 0.969 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
3. SCLT1 2397 1.806 - - - - - - 0.837 0.969 - - sodium channel and clathrin linker 1, transcript variant X6
4. CUL5 ENSGALG00000017165 2480 1.76 - - 0.821 - - - - - - 0.939 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
5. SELM SELM 6366 1.746 - - 0.894 - - - 0.852 - - -
6. TUBA4A ENSGALG00000000433 1367 1.74 - - 0.904 - - - 0.836 - - - tubulin alpha 4a
7. SUN1 ENSGALG00000003781 3442 1.734 - - - - - - 0.849 - - 0.885 Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
8. CCNI ENSGALG00000011457 3203 1.718 - - 0.827 - - - - - - 0.891 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
9. URM1 ENSGALG00000004971 17880 1.717 - - 0.836 - - - 0.881 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
10. MTDH ENSGALG00000034050 9525 1.713 - - - - - - 0.847 - - 0.866 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
11. HBXIP HBXIP 8637 1.712 - - 0.744 - - - - 0.968 - -
12. UFD1L 12964 1.701 - - - - - - 0.796 - - 0.905 ubiquitin fusion degradation 1 like (yeast)
13. LFNG ENSGALG00000038515 5178 1.7 - - - - - - 0.814 - - 0.886 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
14. HELLS ENSGALG00000005451 7094 1.7 - - - - - - 0.852 - - 0.848 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
15. NECAP1 ENSGALG00000037656 5181 1.699 - - - - - - 0.742 0.957 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
16. HNRNPLL ENSGALG00000008504 14719 1.69 - - 0.882 - - - 0.808 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
17. MBNL1 ENSGALG00000029190 3953 1.675 - - 0.836 - - - 0.839 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
18. RAB3IP ENSGALG00000009959 1652 1.65 - - 0.916 - - - 0.734 - - - RAB3A interacting protein, transcript variant X1
19. ISCA1 ENSGALG00000012606 10342 1.647 - - 0.859 - - - - - - 0.788 iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
20. SEC22B ENSGALG00000039704 16080 1.645 - - 0.848 - - - 0.797 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
21. USP8 ENSGALG00000005894 4499 1.637 - - - - - - 0.851 - - 0.786 ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
22. SPG11 ENSGALG00000008180 1890 1.636 - - 0.775 - - - 0.861 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
23. CSTF3 ENSGALG00000011685 4711 1.636 - - 0.802 - - - 0.834 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
24. ZNF451 ENSGALG00000016282 3380 1.617 - - 0.857 - - - 0.760 - - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
25. RNF20 ENSGALG00000015548 7199 1.616 - - 0.774 - - - 0.842 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
26. WDR12 ENSGALG00000008470 7654 1.613 - - 0.758 - - - - - - 0.855 WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
27. CHMP4B ENSGALG00000002095 17422 1.613 - - 0.775 - - - - - - 0.838 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
28. PRTG ENSGALG00000037336 34665 1.612 - - 0.770 - - - - - - 0.842 protogenin [Source:NCBI gene;Acc:415407]
29. TM2D3 ENSGALG00000026271 2566 1.602 - - - - - - 0.860 - 0.742 - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
30. PRPF40A ENSGALG00000012526 7724 1.602 - - 0.785 - - - 0.817 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
31. WDR92 ENSGALG00000008760 3934 1.59 - - 0.867 - - - 0.723 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
32. BTG1L ENSGALG00000004676 2293 1.585 - - 0.841 - - - - - - 0.744 protein BTG1-like
33. SHROOM2 ENSGALG00000030802 4517 1.57 - - 0.812 - - - 0.758 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
34. RTN4 ENSGALG00000029261 45730 1.556 - - 0.835 - - - - 0.721 - - reticulon 4 [Source:NCBI gene;Acc:378790]
35. SURF6 ENSGALG00000038413 11178 1.551 - - 0.819 - - - 0.732 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
36. EAPP ENSGALG00000010007 5080 1.55 - - 0.788 - - - - - - 0.762 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
37. SUV39H2 ENSGALG00000013920 4360 1.541 - - - - - - 0.824 - - 0.717 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
38. SLC39A6 ENSGALG00000013209 1754 1.538 - - 0.814 - - - - - - 0.724 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
39. RPL26 RPL26 343071 1.524 - - 0.790 - - - - - - 0.734
40. COPS2 ENSGALG00000000404 8980 1.521 - - - - - - 0.796 - - 0.725 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
41. SLIT2 ENSGALG00000041121 3223 1.488 - - 0.786 - - - - - - 0.702 slit guidance ligand 2 [Source:NCBI gene;Acc:373967]
42. TADA1L TADA1L 6659 1.475 - - 0.703 - - - 0.772 - - -
43. CETN1 ENSGALG00000026741 7243 1.462 - - - - - - 0.754 - - 0.708 centrin 1 [Source:NCBI gene;Acc:422668]
44. HIPK3 ENSGALG00000011695 6842 1.442 - - - - - - 0.704 - - 0.738 homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
45. PDS5A ENSGALG00000014286 13077 1.439 - - - - - - 0.729 - - 0.710 PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
46. TCOF1 ENSGALG00000005535 24554 1.414 - - 0.703 - - - - 0.711 - - treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
47. CENPP ENSGALG00000004687 6707 0.983 - - - - - - - 0.983 - - centromere protein P [Source:NCBI gene;Acc:415952]
48. FXN ENSGALG00000015108 1867 0.97 - - - - - - - 0.970 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
49. KIAA0895L 1739 0.97 - - - - - - - 0.970 - - KIAA0895 like, transcript variant X4
50. YTHDC2 2266 0.969 - - - - - - - 0.969 - - YTH domain containing 2, transcript variant X3
51. MADD ENSGALG00000008181 2273 0.969 - - - - - - - 0.969 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
52. GGA3 ENSGALG00000007992 3566 0.969 - - - - - - - 0.969 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
53. CARKD CARKD 2914 0.969 - - - - - - - 0.969 - -
54. NPFF1 NPFF1 3177 0.969 - - - - - - - 0.969 - -
55. FAM125B FAM125B 2953 0.968 - - - - - - - 0.968 - -
56. UBALD1 ENSGALG00000007619 8536 0.968 - - - - - - - 0.968 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
57. RNF113A ENSGALG00000000538 3985 0.968 - - - - - - - 0.968 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
58. ENSGALG00000010034 ENSGALG00000010034 3293 0.968 - - - - - - - 0.968 - -
59. JKAMP ENSGALG00000012009 5781 0.968 - - - - - - - 0.968 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
60. ATL1 ENSGALG00000012339 3789 0.967 - - - - - - - 0.967 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
61. TMTC2 ENSGALG00000010975 7040 0.967 - - - - - - - 0.967 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
62. PDCD2L 4843 0.967 - - - - - - - 0.967 - - programmed cell death 2-like
63. RBFA ENSGALG00000036067 6542 0.966 - - - - - - - 0.966 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
64. RIC8A ENSGALG00000004191 6094 0.965 - - - - - - - 0.965 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
65. PGM1 ENSGALG00000011016 3391 0.965 - - - - - - - 0.965 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
66. DDX24 ENSGALG00000010884 5485 0.965 - - - - - - - 0.965 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
67. CHMP5 ENSGALG00000013160 13347 0.964 - - - - - - - 0.964 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
68. EIF3D ENSGALG00000012529 40887 0.964 - - - - - - - 0.964 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
69. CHTOP ENSGALG00000042129 24112 0.958 - - - - - - - 0.958 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
70. ARHGAP11A ENSGALG00000009731 6817 0.956 - - - - - - - 0.956 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
71. CASP3 ENSGALG00000010638 11572 0.956 - - - - - - - 0.956 - - caspase 3 [Source:NCBI gene;Acc:395476]
72. MMADHC ENSGALG00000012473 9026 0.953 - - - - - - - 0.953 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
73. GCLM ENSGALG00000005782 15789 0.951 - - - - - - - 0.951 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
74. NDUFA2 ENSGALG00000040626 27899 0.944 - - - - - - - 0.944 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
75. SH3BP2 ENSGALG00000015665 431 0.942 - - - - - - - - - 0.942 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
76. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.941 - - 0.941 - - - - - - -
77. SPERT ENSGALG00000016981 145 0.937 - - - - - - - - - 0.937 spermatid associated [Source:NCBI gene;Acc:418848]
78. NOC4L ENSGALG00000002272 9644 0.936 - - - - - - - 0.936 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
79. MRPS17 ENSGALG00000002379 30243 0.935 - - - - - - - 0.935 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
80. PRKG1 ENSGALG00000003805 4654 0.934 - - - - - - - 0.934 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
81. BSDC1 ENSGALG00000003405 3701 0.932 - - - - - - - 0.932 - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
82. SMC3 ENSGALG00000008585 16618 0.931 - - - - - - - 0.931 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
83. KLC1 ENSGALG00000011528 1621 0.93 - - - - - - - - - 0.930 kinesin light chain 1, transcript variant X6
84. ANKRD46 ENSGALG00000041445 3791 0.922 - - - - - - - - - 0.922 ankyrin repeat domain 46, transcript variant X1
85. CA9 ENSGALG00000021340 1431 0.917 - - 0.917 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
86. RFK ENSGALG00000033558 1364 0.917 - - 0.917 - - - - - - - riboflavin kinase, transcript variant X3
87. HMGN2 HMGN2 158543 0.915 - - - - - - - 0.915 - -
88. MORC3 ENSGALG00000036556 2976 0.915 - - - - - - 0.915 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
89. MRPS33 ENSGALG00000028879 17966 0.914 - - 0.914 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
90. RECQL ENSGALG00000013174 1323 0.913 - - 0.913 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
91. SNX14 ENSGALG00000015831 2554 0.912 - - 0.912 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
92. GDPD4 ENSGALG00000000690 824 0.912 - - 0.912 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
93. CENPO ENSGALG00000016609 1699 0.91 - - 0.910 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
94. PSMD14 ENSGALG00000011128 13335 0.909 - - 0.909 - - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
95. C18orf8 C18orf8 1512 0.909 - - 0.909 - - - - - - -
96. BBS5 ENSGALG00000009846 344 0.909 - - 0.909 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
97. VPS29 ENSGALG00000004529 22509 0.908 - - - - - - 0.908 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
98. TMEM242 ENSGALG00000013689 377 0.908 - - 0.908 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
99. TCTN2 ENSGALG00000023683 3596 0.908 - - 0.908 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
100. ENSGALG00000004703 ENSGALG00000004703 112 0.908 - - 0.908 - - - - - - -

There are 802 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA