Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPTSSA

Gene Name Gene ID Reads Annotation
SPTSSA ENSGALG00000025755 3361 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]











Genes with expression patterns similar to SPTSSA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPTSSA ENSGALG00000025755 3361 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
2. MRPL50 ENSGALG00000015543 11649 2.469 - - - - - - 0.715 0.797 - 0.957 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
3. PPFIA1 ENSGALG00000035774 5258 2.323 - - - - - - 0.701 0.701 - 0.921 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
4. NUBP1 ENSGALG00000007241 3791 2.163 - - - - - - 0.726 0.700 - 0.737 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
5. STRADA ENSGALG00000000550 6912 1.732 - - - - - - - 0.789 - 0.943 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
6. SMC4 ENSGALG00000009553 15715 1.72 - - - - - - 0.793 - - 0.927 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
7. ARHGAP21 ENSGALG00000007721 3961 1.672 - - - - - - 0.722 - - 0.950 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
8. ODF2 ENSGALG00000004767 3972 1.654 - - - - - - 0.733 - - 0.921 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
9. FBXO38 ENSGALG00000038627 2658 1.651 - - - - - - - 0.727 - 0.924 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
10. ATG16L1 ENSGALG00000001619 3562 1.651 - - - - - - - 0.721 - 0.930 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
11. PLEKHG1 ENSGALG00000012395 2708 1.647 - - - - - - - 0.738 - 0.909 pleckstrin homology and RhoGEF domain containing G1 [Source:HGNC Symbol;Acc:HGNC:20884]
12. PNPT1 ENSGALG00000043545 1306 1.637 - - - - - - 0.723 - - 0.914 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
13. NEO1 ENSGALG00000001774 10165 1.636 - - - - - - 0.717 - - 0.919 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
14. GTF3C1 ENSGALG00000007387 5788 1.636 - - - - - - - 0.711 - 0.925 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
15. COMMD7 ENSGALG00000006630 11491 1.628 - - - - - - 0.770 - - 0.858 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
16. GORASP1 ENSGALG00000006033 4033 1.627 - - - - - - 0.711 - - 0.916 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
17. GGA.31975 GGA.31975 8825 1.619 - - - - - - 0.702 - - 0.917
18. BZW2 ENSGALG00000010809 29213 1.594 - - - - - - - 0.708 - 0.886 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
19. WDR53 ENSGALG00000006395 4938 1.592 - - - - - - 0.709 - - 0.883 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
20. UBL3 ENSGALG00000017084 7417 1.59 - - - - - - 0.715 - - 0.875 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
21. CHRAC1 ENSGALG00000040823 5695 1.588 - - - - - 0.715 - - - 0.873 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
22. TRRAP ENSGALG00000003596 6032 1.586 - - - - - - - 0.707 - 0.879 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
23. DGCR2 ENSGALG00000005891 8405 1.585 - - - - - - 0.715 - - 0.870 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
24. CIB1 ENSGALG00000008302 13946 1.578 - - - - - - 0.729 - - 0.849 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
25. COX17 ENSGALG00000014981 5646 1.577 - - - - - - 0.702 - - 0.875 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
26. DHX38 ENSGALG00000000787 6913 1.558 - - - - - - 0.711 - - 0.847 DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
27. GPR162 ENSGALG00000022926 7181 1.55 - - - - - - - 0.815 - 0.735 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
28. NOC4L ENSGALG00000002272 9644 1.539 - - - - - - 0.714 - - 0.825 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
29. SDF4 ENSGALG00000001872 6382 1.531 - - - - - - - 0.791 - 0.740 stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
30. ZDHHC14 ENSGALG00000013695 2648 1.525 - - - - - - 0.701 - - 0.824 zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
31. NDC80 ENSGALG00000014801 3237 1.525 - - - - - - - 0.703 - 0.822 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
32. MYCBP2 ENSGALG00000016915 2374 1.52 - - - - - - - - 0.704 0.816 MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
33. HSPA4 ENSGALG00000040882 20966 1.518 - - - - - - 0.756 - - 0.762 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
34. MRPL2 ENSGALG00000008597 16500 1.513 - - - - - - 0.738 0.775 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
35. HSD17B11 ENSGALG00000010979 3104 1.511 - - - - - - 0.750 0.761 - - hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]
36. ADIPOR2 ENSGALG00000035533 6523 1.511 - - - - - - - - 0.729 0.782 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
37. UPF2 ENSGALG00000033772 9548 1.49 - - - - - - 0.700 - - 0.790 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
38. HOXA5 ENSGALG00000025929 6231 1.488 - - - - - - - 0.704 - 0.784 homeobox A5 [Source:NCBI gene;Acc:100858404]
39. SDF2L1 ENSGALG00000031982 6084 1.486 - - - - - - - 0.732 - 0.754 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
40. RABIF ENSGALG00000000436 6449 1.473 - - - - - - 0.703 - 0.770 - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
41. C11H16ORF80 C11H16ORF80 18673 1.467 - - - - - - 0.759 0.708 - -
42. RRP36 ENSGALG00000028056 7560 1.462 - - - - - - 0.748 0.714 - - ribosomal RNA processing 36
43. DNM1L ENSGALG00000012929 6174 1.453 - - - - - - 0.745 0.708 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
44. LCLAT1 ENSGALG00000009056 5207 1.449 - - - - - - 0.728 0.721 - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
45. BCL9 ENSGALG00000037655 4620 1.449 - - - - - - - 0.709 - 0.740 B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
46. DNAJC3 ENSGALG00000016894 9048 1.443 - - - - - - 0.712 - - 0.731 DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
47. EXOSC10 ENSGALG00000003086 3223 1.443 - - - - - - 0.742 0.701 - - exosome component 10 [Source:NCBI gene;Acc:419454]
48. NFYB ENSGALG00000041193 6158 1.441 - - - - - - 0.733 - - 0.708 nuclear transcription factor Y subunit beta [Source:NCBI gene;Acc:396205]
49. ATP6AP1 ENSGALG00000008836 4343 1.429 - - - - - - 0.708 0.721 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
50. HYAL3 ENSGALG00000029000 712 0.967 - - - - - - - - - 0.967 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
51. PDPN ENSGALG00000030096 647 0.966 - - - - - - - - - 0.966 podoplanin, transcript variant X4
52. PLA2G15 ENSGALG00000041787 762 0.965 - - - - - - - - - 0.965 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
53. BRD1 ENSGALG00000029379 6047 0.964 - - - - - - - - - 0.964 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
54. UCHL3 ENSGALG00000016921 16208 0.963 - - - - - - - - - 0.963 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
55. HOTAIRM1 HOTAIRM1 4335 0.962 - - - - - - - - - 0.962
56. GXYLT1 ENSGALG00000009532 5682 0.96 - - - - - - - - - 0.960 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
57. PM20D2 ENSGALG00000015779 1301 0.96 - - - - - - - - - 0.960 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
58. SOX6 ENSGALG00000006074 102 0.96 - - - - - - - - - 0.960 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
59. APBA3 ENSGALG00000000740 1249 0.96 - - - - - - - - - 0.960 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
60. SLC30A5 ENSGALG00000014787 5573 0.959 - - - - - - - - - 0.959 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
61. SSH1 ENSGALG00000004928 222 0.959 - - - - - - - - - 0.959 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
62. PROM1 ENSGALG00000014496 2494 0.958 - - - - - - - - - 0.958 prominin 1 [Source:NCBI gene;Acc:422825]
63. 5S_2 5S_2 58 0.958 - - - - - - - - - 0.958
64. FAM190B FAM190B 165 0.957 - - - - - - - - - 0.957
65. INTS10 ENSGALG00000010130 6320 0.957 - - - - - - - - - 0.957 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
66. CPNE2 ENSGALG00000001316 236 0.957 - - - - - - - - - 0.957 copine 2 [Source:NCBI gene;Acc:415646]
67. IL10R2 IL10R2 72 0.957 - - - - - - - - - 0.957
68. HAUS8 ENSGALG00000003727 351 0.957 - - - - - - - - - 0.957 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
69. DCAF5 ENSGALG00000009463 1297 0.957 - - - - - - - - - 0.957 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
70. CXADR ENSGALG00000015701 96 0.957 - - - - - - - - - 0.957 coxsackie virus and adenovirus receptor, transcript variant X2
71. AURKA ENSGALG00000007768 793 0.957 - - - - - - - - - 0.957 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
72. SLC2A3 SLC2A3 527 0.957 - - - - - - - - - 0.957
73. WDSUB1 ENSGALG00000012574 2038 0.956 - - - - - - - - - 0.956 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
74. CNTRL ENSGALG00000001513 1773 0.956 - - - - - - - - - 0.956 centriolin [Source:NCBI gene;Acc:417121]
75. ZNF6 ZNF6 138 0.956 - - - - - - - - - 0.956
76. NARS ENSGALG00000040506 9506 0.956 - - - - - - - - - 0.956 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
77. AGGF1 ENSGALG00000004311 3011 0.955 - - - - - - - - - 0.955 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
78. FSTL4 ENSGALG00000031487 529 0.954 - - - - - - - - - 0.954 follistatin like 4 [Source:NCBI gene;Acc:395163]
79. MSI1 ENSGALG00000007227 2279 0.954 - - - - - - - - - 0.954 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
80. ITSN2 ENSGALG00000016504 651 0.954 - - - - - - - - - 0.954 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
81. CASKIN1 604 0.953 - - - - - - - - - 0.953 CASK interacting protein 1, transcript variant X4
82. ACADL ENSGALG00000002891 8058 0.953 - - - - - - - - - 0.953 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
83. CLSPN ENSGALG00000002346 2590 0.953 - - - - - - - - - 0.953 claspin [Source:NCBI gene;Acc:428223]
84. FASTKD3 ENSGALG00000033521 1186 0.953 - - - - - - - - - 0.953 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
85. TXNDC11 ENSGALG00000003154 2224 0.953 - - - - - - - - - 0.953 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
86. C10orf118 C10orf118 762 0.952 - - - - - - - - - 0.952
87. RTN4R ENSGALG00000007732 1515 0.952 - - - - - - - - - 0.952 reticulon 4 receptor
88. DIAPH3 ENSGALG00000016937 1069 0.952 - - - - - - - - - 0.952 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
89. RSPO2 ENSGALG00000030030 1271 0.951 - - - - - - - - - 0.951 R-spondin 2 [Source:NCBI gene;Acc:420271]
90. ASB3 ENSGALG00000008176 5422 0.95 - - - - - - - - - 0.950 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
91. GRK4 ENSGALG00000015645 1065 0.95 - - - - - - - - - 0.950 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
92. ERI2 1087 0.95 - - - - - - - - - 0.950 ERI1 exoribonuclease family member 2, transcript variant X1
93. ESRRG ENSGALG00000009645 2783 0.95 - - - - - - - - - 0.950 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
94. FAM129A ENSGALG00000004812 269 0.949 - - - - - - - - - 0.949 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
95. ITGA9 ENSGALG00000029378 415 0.949 - - - - - - - - - 0.949 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
96. OSBPL1A ENSGALG00000015086 2702 0.949 - - - - - - - - - 0.949 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
97. PTX3 ENSGALG00000028284 2984 0.949 - - - - - - - - - 0.949 pentraxin 3 [Source:NCBI gene;Acc:548626]
98. KIF11 ENSGALG00000030597 5528 0.948 - - - - - - - - - 0.948 kinesin family member 11 [Source:NCBI gene;Acc:423809]
99. MTERFD1 MTERFD1 3640 0.948 - - - - - - - - - 0.948
100. MTSS1 ENSGALG00000041969 1312 0.948 - - - - - - - - - 0.948 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]

There are 796 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA