Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPTLC2

Gene Name Gene ID Reads Annotation
SPTLC2 ENSGALG00000031928 443 serine palmitoyltransferase long chain base subunit 2 [Source:NCBI gene;Acc:423379]











Genes with expression patterns similar to SPTLC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPTLC2 ENSGALG00000031928 443 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 serine palmitoyltransferase long chain base subunit 2 [Source:NCBI gene;Acc:423379]
2. FANCA ENSGALG00000000516 250 1.598 - - - - - 0.832 0.766 - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
3. ENSGALG00000027352 ENSGALG00000027352 69 0.918 - - - - - 0.918 - - - -
4. CPA6 ENSGALG00000041918 54 0.904 - - - - - 0.904 - - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
5. ABLIM1 ENSGALG00000009048 19 0.903 - - - - - 0.903 - - - - actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
6. gga-mir-6703 ENSGALG00000029026 124 0.899 - - - - - 0.899 - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
7. PALM2 ENSGALG00000015655 20 0.898 - - - - - 0.898 - - - - paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
8. ENSGALG00000028413 ENSGALG00000028413 551 0.895 - - - - - 0.895 - - - -
9. GPR88 ENSGALG00000005252 4 0.895 - - - - - 0.895 - - - - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
10. GLOD5 ENSGALG00000025991 17 0.895 - - - - - 0.895 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
11. SERPINA12 SERPINA12 3 0.895 - - - - - 0.895 - - - -
12. CYP2H1 CYP2H1 363 0.895 - - - - - 0.895 - - - -
13. HINFP ENSGALG00000006806 15 0.895 - - - - - 0.895 - - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
14. ANGPTL3 ENSGALG00000010978 335 0.895 - - - - - 0.895 - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
15. HMGCS2 ENSGALG00000002960 54 0.894 - - - - - 0.894 - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
16. ENSGALG00000028769 ENSGALG00000028769 11 0.894 - - - - - 0.894 - - - -
17. RPL3L ENSGALG00000005458 9 0.894 - - - - - 0.894 - - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
18. PCID2 ENSGALG00000016831 57 0.892 - - - - - 0.892 - - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
19. P2RY1 ENSGALG00000010357 11 0.889 - - - - - 0.889 - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
20. RAD54L2 ENSGALG00000003243 187 0.885 - - - - - 0.885 - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
21. TMEM117 ENSGALG00000009596 48 0.881 - - - - - 0.881 - - - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
22. C17orf62 C17orf62 37 0.881 - - - - - 0.881 - - - -
23. ARSK ENSGALG00000014672 395 0.879 - - - - - 0.879 - - - - arylsulfatase family member K [Source:NCBI gene;Acc:427116]
24. GPR137B ENSGALG00000010843 69 0.876 - - - - - 0.876 - - - - G protein-coupled receptor 137B [Source:NCBI gene;Acc:421511]
25. PRPF19 ENSGALG00000040048 168 0.875 - - - - - 0.875 - - - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
26. CCNJ ENSGALG00000006955 47 0.872 - - - - - 0.872 - - - - cyclin J [Source:HGNC Symbol;Acc:HGNC:23434]
27. TTLL7 ENSGALG00000008850 49 0.871 - - - - - 0.871 - - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
28. UBE3C ENSGALG00000006461 57 0.868 - - - - - 0.868 - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
29. CRYBA2 ENSGALG00000011354 14 0.868 - - - - - 0.868 - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
30. BAALC ENSGALG00000045617 850 0.867 - - - - - - 0.867 - - - BAALC, MAP3K1 and KLF4 binding [Source:HGNC Symbol;Acc:HGNC:14333]
31. WDR35 157 0.866 - - - - - - 0.866 - - - WD repeat domain 35, transcript variant X1
32. ADCY2 ENSGALG00000013060 164 0.866 - - - - - 0.866 - - - - adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]
33. LYRM1 ENSGALG00000002273 1523 0.864 - - - - - - 0.864 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
34. ENSGALG00000026930 ENSGALG00000026930 681 0.863 - - - - - 0.863 - - - -
35. ADAP2 ENSGALG00000003319 134 0.861 - - - - - - 0.861 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
36. SCTR ENSGALG00000012106 49 0.858 - - - - - - 0.858 - - - secretin receptor [Source:NCBI gene;Acc:770943]
37. CLDN1 ENSGALG00000026862 28 0.857 - - - - - 0.857 - - - - claudin 1 [Source:NCBI gene;Acc:424910]
38. KLF4 ENSGALG00000026928 184 0.855 - - - - - - 0.855 - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
39. PPP2R3A ENSGALG00000034512 1091 0.854 - - - - - - 0.854 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
40. CIP1 CIP1 44 0.852 - - - - - 0.852 - - - -
41. FAM69A ENSGALG00000005918 157 0.852 - - - - - - 0.852 - - - family with sequence similarity 69 member A, transcript variant X4
42. TAP1 ENSGALG00000035075 54 0.851 - - - - - - 0.851 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
43. ARHGAP39 ENSGALG00000001536 15 0.851 - - - - - 0.851 - - - - Rho GTPase activating protein 39, transcript variant X2
44. TFB1M ENSGALG00000013647 84 0.851 - - - - - - 0.851 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
45. TOR4A ENSGALG00000008623 1364 0.85 - - - - - 0.850 - - - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
46. PTPN21 ENSGALG00000010616 129 0.85 - - - - - - 0.850 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
47. ASB1 ENSGALG00000004272 38 0.85 - - - - - 0.850 - - - - ankyrin repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:16011]
48. HOXD10 ENSGALG00000009270 66 0.849 - - - - - 0.849 - - - - homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]
49. HN1L HN1L 247 0.849 - - - - - - 0.849 - - -
50. COPS8 ENSGALG00000033385 10166 0.849 - - - - - 0.849 - - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
51. SLCO3A1 ENSGALG00000006871 1125 0.848 - - - - - - 0.848 - - - solute carrier organic anion transporter family member 3A1 [Source:HGNC Symbol;Acc:HGNC:10952]
52. MYLIP ENSGALG00000012704 983 0.848 - - - - - - 0.848 - - - myosin regulatory light chain interacting protein [Source:NCBI gene;Acc:420841]
53. RNF170 ENSGALG00000015386 296 0.845 - - - - - - 0.845 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
54. LOC112532477 ENSGALG00000027520 40 0.845 - - - - - - 0.845 - - - fibrinogen-like protein 1-like protein
55. PANX1 ENSGALG00000039751 70 0.845 - - - - - - 0.845 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
56. ZNF618 ENSGALG00000008886 1326 0.844 - - - - - - 0.844 - - - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
57. CXADR ENSGALG00000015701 96 0.844 - - - - - - 0.844 - - - coxsackie virus and adenovirus receptor, transcript variant X2
58. FAM46C 13 0.842 - - - - - - 0.842 - - - family with sequence similarity 46 member C
59. CHST9 ENSGALG00000019489 21 0.842 - - - - - - 0.842 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
60. ENSGALG00000026592 ENSGALG00000026592 4331 0.842 - - - - - 0.842 - - - -
61. MAP3K19 ENSGALG00000028457 17 0.842 - - - - - - 0.842 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
62. CBLN1 ENSGALG00000042664 15 0.842 - - - - - - 0.842 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
63. MBL2 ENSGALG00000002507 17 0.842 - - - - - - 0.842 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
64. ANKRD33B ENSGALG00000038328 22 0.84 - - - - - 0.840 - - - - ankyrin repeat domain 33B [Source:HGNC Symbol;Acc:HGNC:35240]
65. GLS ENSGALG00000030419 440 0.838 - - - - - 0.838 - - - - glutaminase [Source:NCBI gene;Acc:424043]
66. LGI2 ENSGALG00000043283 433 0.837 - - - - - - 0.837 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]
67. FOXRED1 ENSGALG00000046347 4176 0.837 - - - - - - 0.837 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
68. CDH2 ENSGALG00000015132 2848 0.837 - - - - - - 0.837 - - - cadherin 2 [Source:NCBI gene;Acc:414745]
69. ASH1L ENSGALG00000014638 803 0.836 - - - - - - 0.836 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
70. GUCY1B3 29 0.836 - - - - - 0.836 - - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
71. METAP1 ENSGALG00000012239 1125 0.835 - - - - - - 0.835 - - - methionyl aminopeptidase 1 [Source:NCBI gene;Acc:422704]
72. EFCAB7 ENSGALG00000010998 13 0.834 - - - - - - 0.834 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
73. SERPIND1 ENSGALG00000039239 22 0.834 - - - - - 0.834 - - - - serpin family D member 1 [Source:HGNC Symbol;Acc:HGNC:4838]
74. LAMP1 ENSGALG00000037697 247 0.834 - - - - - 0.834 - - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
75. TEC ENSGALG00000014124 70 0.833 - - - - - 0.833 - - - - tec protein tyrosine kinase [Source:NCBI gene;Acc:396407]
76. SLC16A14 ENSGALG00000002897 157 0.833 - - - - - - 0.833 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
77. KIAA1244 KIAA1244 62 0.832 - - - - - - 0.832 - - -
78. ANO6 ENSGALG00000009638 470 0.832 - - - - - - 0.832 - - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
79. PLK4 ENSGALG00000010195 514 0.832 - - - - - - 0.832 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
80. SYT8 ENSGALG00000006602 369 0.831 - - - - - - 0.831 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
81. LOC769139 ENSGALG00000026754 753 0.831 - - - - - - 0.831 - - - feather keratin 1-like, transcript variant X2
82. VWDE ENSGALG00000042443 160 0.83 - - - - - - 0.830 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
83. SMAD7A SMAD7A 78 0.829 - - - - - 0.829 - - - -
84. PCDH11X ENSGALG00000006851 314 0.828 - - - - - - 0.828 - - - protocadherin 11 X-linked, transcript variant X1
85. ELAVL2 ENSGALG00000015799 585 0.828 - - - - - - 0.828 - - - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
86. NUP43 ENSGALG00000012387 11779 0.828 - - - - - 0.828 - - - - nucleoporin 43 [Source:HGNC Symbol;Acc:HGNC:21182]
87. ARHGAP12 ENSGALG00000007254 479 0.827 - - - - - - 0.827 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
88. KCNK2 ENSGALG00000009687 1552 0.826 - - - - - - 0.826 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
89. SMAD3 ENSGALG00000035701 161 0.825 - - - - - - 0.825 - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
90. SLC2A9 ENSGALG00000014971 751 0.825 - - - - - - 0.825 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
91. CAT-1 CAT-1 115 0.824 - - - - - - 0.824 - - -
92. SLC45A4 ENSGALG00000034971 142 0.824 - - - - - 0.824 - - - - solute carrier family 45 member 4 [Source:HGNC Symbol;Acc:HGNC:29196]
93. GRID1 ENSGALG00000037366 159 0.823 - - - - - - 0.823 - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
94. AAGAB ENSGALG00000007887 142 0.822 - - - - - - 0.822 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
95. CP ENSGALG00000030773 119 0.822 - - - - - 0.822 - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
96. SNORD35 SNORD35 366 0.822 - - - - - 0.822 - - - -
97. LOC419074 ENSGALG00000017336 1885 0.821 - - - - - - 0.821 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
98. MTOR ENSGALG00000003339 328 0.82 - - - - - - 0.820 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
99. RAB22A ENSGALG00000007554 201 0.819 - - - - - - 0.819 - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
100. WSCD1 ENSGALG00000005886 539 0.818 - - - - - - 0.818 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA