Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPTLC1

Gene Name Gene ID Reads Annotation
SPTLC1 ENSGALG00000013493 3918 serine palmitoyltransferase long chain base subunit 1 [Source:HGNC Symbol;Acc:HGNC:11277]











Genes with expression patterns similar to SPTLC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPTLC1 ENSGALG00000013493 3918 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine palmitoyltransferase long chain base subunit 1 [Source:HGNC Symbol;Acc:HGNC:11277]
2. NDUFC2 ENSGALG00000029172 26136 1.613 - - 0.813 - - - 0.800 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
3. GLB1L2 ENSGALG00000001604 4057 1.521 - - 0.796 - - - - 0.725 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
4. TMEM167A ENSGALG00000027332 13862 1.517 - - 0.701 - - - 0.816 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
5. BAG5 ENSGALG00000031062 4498 1.512 - - 0.780 - - - 0.732 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
6. KTN1 ENSGALG00000012137 4058 1.51 - - - - - - 0.729 0.781 - - kinectin 1 [Source:NCBI gene;Acc:396335]
7. HARS ENSGALG00000035080 11602 1.5 - - - - - - 0.753 0.747 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
8. VPS13D ENSGALG00000034777 2350 1.496 - - 0.751 - - - 0.745 - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
9. PTCD3 ENSGALG00000015773 3059 1.494 - - 0.775 - - - 0.719 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
10. PCNT ENSGALG00000007021 6428 1.491 - - 0.713 - - - 0.778 - - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
11. SPDL1 ENSGALG00000001942 4403 1.489 - - 0.709 - - - 0.780 - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
12. COX17 ENSGALG00000014981 5646 1.488 - - - - - - 0.746 0.742 - - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
13. CAMSAP1 ENSGALG00000001692 2617 1.485 - - 0.746 - - - 0.739 - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
14. HCCS ENSGALG00000005571 4939 1.478 - - 0.754 - - - 0.724 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
15. GUK1 ENSGALG00000005336 5134 1.473 - - - - - - 0.767 0.706 - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
16. NR2C1 ENSGALG00000011327 5109 1.472 - - 0.718 - - - 0.754 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
17. C12H3ORF37 C12H3ORF37 6362 1.464 - - 0.754 - - - 0.710 - - -
18. NAA20 ENSGALG00000012587 11349 1.46 - - - - - - 0.759 0.701 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
19. NCAPD2 ENSGALG00000039448 8658 1.457 - - 0.730 - - - 0.727 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
20. NENF ENSGALG00000009821 4826 1.444 - - - - - - 0.701 0.743 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
21. ARID4B ENSGALG00000034003 5364 1.438 - - - - - - 0.734 0.704 - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
22. CBLL1 ENSGALG00000038981 6725 1.434 - - 0.705 - - - 0.729 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
23. TIMMDC1 ENSGALG00000024480 9337 1.432 - - 0.713 - - - - 0.719 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
24. RAE1 ENSGALG00000007653 8930 1.43 - - 0.729 - - - 0.701 - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
25. CTSL2 CTSL2 7966 1.43 - - - - - - 0.705 0.725 - -
26. PLAA ENSGALG00000001782 5459 1.429 - - - - - - 0.718 0.711 - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
27. KLHL21 ENSGALG00000035211 6145 1.407 - - - - - - 0.703 0.704 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
28. SUCLG2 ENSGALG00000007652 9688 0.867 - - - - - - 0.867 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
29. RIOK2 ENSGALG00000015288 6280 0.864 - - - - - - 0.864 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
30. OSTC ENSGALG00000010526 19422 0.86 - - - - - - 0.860 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
31. GOLGA7 ENSGALG00000003483 26525 0.859 - - - - - - 0.859 - - - golgin A7 [Source:NCBI gene;Acc:426787]
32. NOP58 ENSGALG00000008454 34630 0.852 - - - - - - 0.852 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
33. P4HA1 ENSGALG00000004325 4703 0.846 - - - - - - 0.846 - - - prolyl 4-hydroxylase subunit alpha 1 [Source:NCBI gene;Acc:423704]
34. R3HDM1 ENSGALG00000012246 6580 0.845 - - - - - - 0.845 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
35. PREP ENSGALG00000015405 17050 0.843 - - - - - - 0.843 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
36. KIAA0020 KIAA0020 14353 0.842 - - - - - - 0.842 - - -
37. RABGGTB ENSGALG00000011388 11654 0.842 - - - - - - 0.842 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
38. RAB3IP ENSGALG00000009959 1652 0.84 - - 0.840 - - - - - - - RAB3A interacting protein, transcript variant X1
39. HSPA4 ENSGALG00000040882 20966 0.839 - - - - - - 0.839 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
40. PTTG1 17936 0.839 - - - - - - 0.839 - - - pituitary tumor-transforming 1, transcript variant X1
41. DERL1 ENSGALG00000033950 15074 0.838 - - - - - - 0.838 - - - derlin 1 [Source:NCBI gene;Acc:420350]
42. TTC37 ENSGALG00000014670 5715 0.838 - - - - - - 0.838 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
43. MAPRE3 ENSGALG00000031726 191 0.837 - - 0.837 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
44. ZNF593 ENSGALG00000000542 79105 0.837 - - - - - - 0.837 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
45. CDCA7L ENSGALG00000035978 2112 0.835 - - 0.835 - - - - - - - cell division cycle associated 7 like [Source:NCBI gene;Acc:420608]
46. STAMBP ENSGALG00000042555 1362 0.835 - - 0.835 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
47. DSCR3 3583 0.835 - - - - - - 0.835 - - - DSCR3 arrestin fold containing, transcript variant X1
48. WBP4 ENSGALG00000016949 5858 0.834 - - 0.834 - - - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
49. BIRC6 ENSGALG00000010541 7999 0.831 - - - - - - 0.831 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
50. TM2D2 ENSGALG00000003356 7088 0.828 - - - - - - - 0.828 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
51. PHACTR4 ENSGALG00000042485 3523 0.828 - - - - - - - 0.828 - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
52. OCIAD1 ENSGALG00000014081 12065 0.828 - - - - - - 0.828 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
53. ECI1 ENSGALG00000031563 11326 0.827 - - - - - - 0.827 - - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
54. SDHD ENSGALG00000007878 25129 0.826 - - - - - - 0.826 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
55. TXNL1 ENSGALG00000033862 13899 0.825 - - - - - - 0.825 - - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
56. NFRKB ENSGALG00000001306 4469 0.825 - - - - - - - 0.825 - - nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
57. VATB VATB 13756 0.825 - - - - - - 0.825 - - -
58. PPME1 ENSGALG00000017312 2634 0.824 - - 0.824 - - - - - - - protein phosphatase methylesterase 1 [Source:NCBI gene;Acc:419058]
59. CHMP3 ENSGALG00000015805 11581 0.823 - - - - - - 0.823 - - - charged multivesicular body protein 3
60. KCTD10 ENSGALG00000005138 1191 0.822 - - 0.822 - - - - - - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
61. FCF1 ENSGALG00000010275 24928 0.822 - - - - - - 0.822 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
62. YWHAZ ENSGALG00000031387 84985 0.819 - - - - - - 0.819 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
63. CDC40 ENSGALG00000015061 6118 0.818 - - - - - - 0.818 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
64. C1H12ORF23 C1H12ORF23 13234 0.817 - - - - - - 0.817 - - -
65. UBE2V1 ENSGALG00000008015 17947 0.817 - - - - - - 0.817 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
66. LLPH ENSGALG00000019358 20976 0.817 - - - - - - 0.817 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
67. NDUFB3 ENSGALG00000008239 15511 0.816 - - - - - - 0.816 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
68. RALGAPA2 240 0.816 - - 0.816 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
69. SPINZ SPINZ 10341 0.816 - - - - - - 0.816 - - -
70. PDHA1 ENSGALG00000016430 7070 0.815 - - 0.815 - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
71. MRPL20 ENSGALG00000001542 28764 0.815 - - - - - - 0.815 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
72. RSL1D1 ENSGALG00000033690 13638 0.814 - - - - - - 0.814 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
73. EXOSC9 ENSGALG00000011884 3403 0.814 - - - - - - 0.814 - - - exosome component 9 [Source:NCBI gene;Acc:619530]
74. CCNI ENSGALG00000011457 3203 0.813 - - 0.813 - - - - - - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
75. GLRX3 ENSGALG00000010464 22578 0.813 - - - - - - 0.813 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
76. TIPRL ENSGALG00000015246 7875 0.812 - - - - - - - 0.812 - - TOR signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:30231]
77. SMC4 ENSGALG00000009553 15715 0.812 - - - - - - 0.812 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
78. MRPL47 ENSGALG00000013759 9044 0.812 - - - - - - 0.812 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
79. MED14 ENSGALG00000016238 4685 0.812 - - - - - - 0.812 - - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
80. gga-mir-6596 ENSGALG00000026117 2893 0.81 - - - - - - 0.810 - - - gga-mir-6596 [Source:miRBase;Acc:MI0022416]
81. DCAF7 ENSGALG00000000510 8681 0.81 - - - - - - 0.810 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
82. C6ORF162 C6ORF162 4217 0.81 - - - - - - 0.810 - - -
83. CMPK CMPK 9569 0.809 - - - - - - 0.809 - - -
84. TMEM242 ENSGALG00000013689 377 0.809 - - 0.809 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
85. KIF2C ENSGALG00000010120 8999 0.807 - - - - - - 0.807 - - - kinesin family member 2C, transcript variant X1
86. TFDP1 ENSGALG00000016823 17019 0.807 - - - - - - 0.807 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
87. TSG101 ENSGALG00000006312 8289 0.806 - - - - - - 0.806 - - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
88. EGLN1 ENSGALG00000041422 11032 0.805 - - - - - - 0.805 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
89. MRPL30 ENSGALG00000016760 16965 0.805 - - - - - - 0.805 - - - mitochondrial ribosomal protein L30
90. RRP1B ENSGALG00000035696 12309 0.804 - - - - - - 0.804 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
91. LTN1 ENSGALG00000015804 3784 0.803 - - - - - - 0.803 - - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
92. ELMOD1 ENSGALG00000017169 2303 0.803 - - 0.803 - - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
93. NDUFA12 ENSGALG00000011325 19807 0.802 - - - - - - 0.802 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
94. MTFR2 ENSGALG00000019967 4436 0.802 - - - - - - 0.802 - - - mitochondrial fission regulator 2, transcript variant X1
95. C18orf8 C18orf8 1512 0.802 - - 0.802 - - - - - - -
96. RFC1 ENSGALG00000014298 6516 0.802 - - - - - - 0.802 - - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
97. SNRNP40 ENSGALG00000000615 32298 0.802 - - - - - - 0.802 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
98. CENPP ENSGALG00000004687 6707 0.801 - - - - - - 0.801 - - - centromere protein P [Source:NCBI gene;Acc:415952]
99. AMBRA1 ENSGALG00000008358 2865 0.801 - - 0.801 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
100. RECQL ENSGALG00000013174 1323 0.801 - - 0.801 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]

There are 729 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA