Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPTBN1

Gene Name Gene ID Reads Annotation
SPTBN1 ENSGALG00000029512 18579 spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]











Genes with expression patterns similar to SPTBN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPTBN1 ENSGALG00000029512 18579 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
2. BTAF1 ENSGALG00000030598 3556 1.626 - - - - - 0.719 0.907 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
3. MRPL19 ENSGALG00000016731 22670 1.623 - - - - - - 0.879 0.744 - - mitochondrial ribosomal protein L19, transcript variant X1
4. YBX1 ENSGALG00000004848 20992 1.576 0.772 - - - - - 0.804 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
5. THOC2 ENSGALG00000008507 9501 1.513 - - - - - - 0.800 0.713 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
6. NAP1L1 ENSGALG00000010238 14506 1.413 0.708 - 0.705 - - - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
7. CLTA ENSGALG00000015326 26867 0.969 - - - - - - 0.969 - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
8. COX7A2L ENSGALG00000037996 13646 0.941 - - - - - - 0.941 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
9. COPE ENSGALG00000003153 19444 0.937 - - - - - - 0.937 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
10. TP53BP2 ENSGALG00000042816 12368 0.91 - - - - - - 0.910 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
11. NDUFA9 ENSGALG00000017282 14358 0.909 - - - - - - 0.909 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
12. PSMA6 ENSGALG00000010060 26517 0.908 - - - - - - 0.908 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
13. GTF2E1 ENSGALG00000042320 7712 0.908 - - - - - - 0.908 - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
14. KARS ENSGALG00000000907 51247 0.906 - - - - - - 0.906 - - - lysyl-tRNA synthetase [Source:NCBI gene;Acc:415885]
15. HADH ENSGALG00000016124 18216 0.904 - - - - - - 0.904 - - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
16. UBA3 ENSGALG00000013410 6923 0.903 - - - - - - 0.903 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
17. MRPL44 ENSGALG00000003067 15256 0.901 - - - - - - 0.901 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
18. TM9SF3 ENSGALG00000005534 15290 0.901 - - - - - - 0.901 - - - transmembrane 9 superfamily member 3
19. KIF15 ENSGALG00000036645 9946 0.899 - - - - - - 0.899 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
20. SNORA72 SNORA72 27695 0.898 - - - - - - 0.898 - - -
21. ADH5 ENSGALG00000012245 38217 0.897 - - - - - - 0.897 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
22. MRPS11 ENSGALG00000006777 16009 0.897 - - - - - - 0.897 - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
23. GFM1 ENSGALG00000009634 7213 0.896 - - - - - - 0.896 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
24. PEPD ENSGALG00000004899 9785 0.895 - - - - - - 0.895 - - - peptidase D [Source:NCBI gene;Acc:415776]
25. MED7 ENSGALG00000003870 4244 0.893 - - - - - - 0.893 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
26. AIRC AIRC 15851 0.893 - - - - - - 0.893 - - -
27. ZMYM2 ENSGALG00000017139 3747 0.89 - - - - - - 0.890 - - - zinc finger MYM-type containing 2, transcript variant X10
28. GCLM ENSGALG00000005782 15789 0.885 - - - - - - 0.885 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
29. GABPA ENSGALG00000015763 11567 0.882 - - - - - - 0.882 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
30. GPX1 ENSGALG00000028204 62935 0.881 - - - - - - 0.881 - - - glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
31. PSMC2 ENSGALG00000008236 25980 0.881 - - - - - - 0.881 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
32. TRAM1 ENSGALG00000041112 22876 0.88 - - - - - - 0.880 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
33. SOD2 ENSGALG00000011661 13178 0.88 - - - - - - 0.880 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
34. PRPS1 ENSGALG00000004908 27994 0.879 - - - - - - 0.879 - - - phosphoribosyl pyrophosphate synthetase 1
35. LARP1 ENSGALG00000040109 14808 0.877 - - - - - - 0.877 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
36. CREPT CREPT 17142 0.877 - - - - - - 0.877 - - -
37. MINOS1 ENSGALG00000004039 37740 0.876 - - - - - - 0.876 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
38. FAM96B 14435 0.876 - - - - - - 0.876 - - - family with sequence similarity 96 member B
39. POLA1 ENSGALG00000016312 9440 0.874 - - - - - - 0.874 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
40. DNAJC15 ENSGALG00000016965 9163 0.87 - - - - - - 0.870 - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
41. MGST1 ENSGALG00000013098 17632 0.87 - - - - - - 0.870 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
42. UBR7 ENSGALG00000010842 16488 0.869 - - - - - - 0.869 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
43. SLC25A14 ENSGALG00000004063 5574 0.867 - - - - - - 0.867 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
44. POR ENSGALG00000002053 5223 0.864 - - - - - - 0.864 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
45. HNRNPR ENSGALG00000000814 32290 0.863 - - - - - - 0.863 - - - heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:419570]
46. CHMP7 ENSGALG00000000409 8967 0.862 - - - - - - 0.862 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
47. SDF4 ENSGALG00000001872 6382 0.862 - - - - - - 0.862 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
48. TCP1 ENSGALG00000011637 73216 0.858 - - - - - - 0.858 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
49. PRMT3 ENSGALG00000003958 14160 0.857 - - - - - - 0.857 - - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
50. PTBP1 ENSGALG00000001962 66983 0.855 - - - - - - 0.855 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
51. WBP11 ENSGALG00000011745 11182 0.855 - - - - - - 0.855 - - - WW domain binding protein 11, transcript variant X1
52. LAP3 ENSGALG00000006334 21076 0.855 - - - - - - 0.855 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
53. PRCP ENSGALG00000037521 4012 0.855 - - - - - - 0.855 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
54. ENSGALG00000027854 ENSGALG00000027854 5007 0.854 - - - - - - 0.854 - - -
55. CRMP1B CRMP1B 18633 0.852 - - - - - - 0.852 - - -
56. PMM2 ENSGALG00000007326 8260 0.851 - - - - - - 0.851 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
57. SIRT1 ENSGALG00000002761 9028 0.851 - - - - - - 0.851 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
58. NRD1 NRD1 10827 0.85 - - - - - - 0.850 - - -
59. ID2 ENSGALG00000035016 22120 0.85 - - - - - - 0.850 - - - inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
60. OGFOD1 6926 0.849 - - - - - - 0.849 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
61. TALDO1 ENSGALG00000037195 30673 0.848 - - - - - - 0.848 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
62. CDKL1 ENSGALG00000012295 1732 0.844 - - - - - - 0.844 - - - cyclin dependent kinase like 1 [Source:HGNC Symbol;Acc:HGNC:1781]
63. E2F6 ENSGALG00000016454 4747 0.844 - - - - - - 0.844 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
64. DNA2 ENSGALG00000004037 5426 0.842 - - - - - - 0.842 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
65. POLR3E ENSGALG00000007008 4010 0.841 - - - - - - 0.841 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
66. TKT ENSGALG00000005309 19801 0.841 - - - - - - 0.841 - - - transketolase [Source:HGNC Symbol;Acc:HGNC:11834]
67. SEMA4B ENSGALG00000008297 11202 0.839 - - - - - - 0.839 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
68. EIF3M ENSGALG00000012109 38661 0.838 - - - - - - 0.838 - - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
69. HDGFL3 ENSGALG00000006036 13576 0.836 - - - - - - 0.836 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
70. ARPC4 ENSGALG00000006691 33311 0.835 - - - - - - 0.835 - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
71. RBM12B ENSGALG00000035129 4314 0.833 - - - - - - 0.833 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
72. AP2B1 ENSGALG00000042125 13229 0.831 - - - - - - 0.831 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
73. KCTD9 ENSGALG00000000275 3455 0.831 - - - - - - 0.831 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
74. H2AFY_1 ENSGALG00000040141 4895 0.831 - - - - - - 0.831 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
75. RGCC ENSGALG00000016954 1282 0.831 - - - - - - 0.831 - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
76. NCAM1 ENSGALG00000007839 19929 0.831 - - - - - - 0.831 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
77. ENSGALG00000007509 ENSGALG00000007509 18441 0.83 - - - - - - 0.830 - - -
78. RPA1 ENSGALG00000003072 8023 0.829 - - - - - - 0.829 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
79. MRPS9 ENSGALG00000016794 5875 0.829 - - - - - - - 0.829 - - mitochondrial ribosomal protein S9 [Source:NCBI gene;Acc:418723]
80. BPTF ENSGALG00000038222 7521 0.828 - - - - - - 0.828 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
81. DYNC1LI1 ENSGALG00000011491 11011 0.828 - - - - - - 0.828 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
82. MRE11A MRE11A 5754 0.828 - - - - - - 0.828 - - -
83. NCOA4 ENSGALG00000002066 10544 0.827 - - - - - - 0.827 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
84. ARNT2 ENSGALG00000006445 7050 0.826 - - - - - - 0.826 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
85. ATE1 ENSGALG00000009502 3751 0.826 - - - - - - 0.826 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
86. SFT2D1 ENSGALG00000020005 10855 0.825 - - - - - - 0.825 - - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
87. EI24 ENSGALG00000038097 24081 0.825 - - - - - - 0.825 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
88. PPP3R1 ENSGALG00000023648 3417 0.824 - - - - - - 0.824 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
89. CLCN3 ENSGALG00000009674 3704 0.824 - - - - - - 0.824 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
90. EWSR1 ENSGALG00000008149 13014 0.823 - - - - - - - 0.823 - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
91. UPF1 ENSGALG00000003220 9496 0.821 - - - - - - 0.821 - - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
92. SF3A3 ENSGALG00000001540 9664 0.821 - - - - - - 0.821 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
93. ZMYND11 ENSGALG00000006599 5740 0.821 - - - - - - 0.821 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
94. STK4 ENSGALG00000004098 11366 0.821 - - - - - - 0.821 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
95. ARID4A ENSGALG00000012037 8554 0.821 - - - - - - 0.821 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
96. METTL11A METTL11A 11876 0.819 - - - - - - 0.819 - - -
97. ACAA2 ENSGALG00000031142 29220 0.819 - - - - - - 0.819 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
98. RILPL2 ENSGALG00000003321 5632 0.818 - - - - - - 0.818 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
99. XRN1 ENSGALG00000002706 4014 0.818 - - - - - - 0.818 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
100. CCND1 ENSGALG00000007555 6715 0.816 - - - - - - 0.816 - - - cyclin D1 [Source:NCBI gene;Acc:396341]

There are 220 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA