Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPSB3

Gene Name Gene ID Reads Annotation
SPSB3 ENSGALG00000002285 1329 splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]











Genes with expression patterns similar to SPSB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPSB3 ENSGALG00000002285 1329 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
2. WDR48 ENSGALG00000006052 3575 2.231 - - 0.786 - 0.708 0.737 - - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
3. CLIC3 ENSGALG00000038789 233 1.745 - - 0.768 - 0.977 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
4. DSL1 DSL1 113 1.74 - - - - 0.916 0.824 - - - -
5. NPY ENSGALG00000010983 441 1.727 - - 0.858 - 0.869 - - - - - neuropeptide Y [Source:NCBI gene;Acc:396464]
6. OFD1 ENSGALG00000016576 1916 1.708 - - - - 0.923 0.785 - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
7. MED7 ENSGALG00000003870 4244 1.66 - - - - 0.910 0.750 - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
8. ABCD2 ENSGALG00000042554 1607 1.658 - - 0.720 - 0.938 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
9. YWHAQ ENSGALG00000016433 3450 1.646 - - - - 0.826 0.820 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
10. TBC1D22A ENSGALG00000043058 1614 1.632 - - - - 0.796 0.836 - - - - TBC1 domain family member 22A [Source:NCBI gene;Acc:428128]
11. PRMT10 PRMT10 1169 1.616 - - - - 0.908 - - 0.708 - -
12. MUL1L ENSGALG00000006246 2084 1.439 - - - - 0.734 0.705 - - - - mitochondrial E3 ubiquitin protein ligase 1-like, transcript variant X2
13. PAQR8 ENSGALG00000016675 85 0.98 - - - - 0.980 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
14. STON2 ENSGALG00000010579 76 0.98 - - - - 0.980 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
15. ASTE1 ENSGALG00000036171 155 0.978 - - - - 0.978 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
16. CCDC6 ENSGALG00000003165 93 0.975 - - - - 0.975 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
17. CECR1 336 0.972 - - - - 0.972 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
18. KCNC4 ENSGALG00000000400 129 0.97 - - - - 0.970 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
19. TEF ENSGALG00000011958 375 0.966 - - - - 0.966 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
20. CSPP1 1756 0.964 - - - - 0.964 - - - - - centrosome and spindle pole associated protein 1
21. CMTM3 ENSGALG00000000424 393 0.963 - - - - 0.963 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
22. PPTC7 ENSGALG00000004550 154 0.958 - - - - 0.958 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
23. FAM171B ENSGALG00000002646 837 0.958 - - - - 0.958 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
24. SRSF4 1200 0.957 - - - - 0.957 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
25. CANT1 ENSGALG00000011822 2218 0.956 - - - - 0.956 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
26. BBX ENSGALG00000015353 1281 0.956 - - - - 0.956 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
27. DPP7 ENSGALG00000038145 4888 0.955 - - - - 0.955 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
28. MOCS3 ENSGALG00000007986 308 0.951 - - - - 0.951 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
29. ENSGALG00000022967 ENSGALG00000022967 240 0.95 - - - - 0.950 - - - - -
30. KIF7 ENSGALG00000006611 33 0.946 - - - - - 0.946 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
31. OLFML1 ENSGALG00000027184 19 0.946 - - - - - 0.946 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
32. AQP1 ENSGALG00000005209 111 0.945 - - - - - 0.945 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
33. SH2D1B ENSGALG00000028448 17 0.945 - - - - - 0.945 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
34. GPD1L2 ENSGALG00000012061 31 0.945 - - - - - 0.945 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
35. ACN9 ACN9 269 0.943 - - - - - 0.943 - - - -
36. C1orf168 C1orf168 98 0.943 - - - - - 0.943 - - - -
37. PACSIN2 ENSGALG00000014159 601 0.943 - - - - - 0.943 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
38. DUS2 856 0.943 - - - - 0.943 - - - - - dihydrouridine synthase 2, transcript variant X2
39. KCNB1 ENSGALG00000004758 620 0.942 - - - - 0.942 - - - - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
40. DRD4 ENSGALG00000040761 79 0.942 - - - - - 0.942 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
41. HJURP ENSGALG00000015363 54 0.941 - - - - - 0.941 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
42. RAC3 ENSGALG00000040606 355 0.94 - - - - - 0.940 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
43. CADM3 ENSGALG00000036925 1753 0.94 - - - - 0.940 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
44. GLT8D1 ENSGALG00000001642 4232 0.939 - - - - 0.939 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
45. NIPAL4 ENSGALG00000039687 29 0.939 - - - - - 0.939 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
46. TAC1 ENSGALG00000009737 2211 0.939 - - - - 0.939 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
47. SCAF8 ENSGALG00000013635 421 0.938 - - - - - 0.938 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
48. ENSGALG00000006865 ENSGALG00000006865 307 0.938 - - - - 0.938 - - - - -
49. POLB ENSGALG00000040828 7462 0.938 - - - - - 0.938 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
50. GGA.10540 GGA.10540 3324 0.937 - - - - 0.937 - - - - -
51. B3GAT2 ENSGALG00000031590 615 0.936 - - - - 0.936 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
52. CLASP1 ENSGALG00000011645 1378 0.936 - - - - - 0.936 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
53. LOC419851 ENSGALG00000023953 80 0.936 - - - - - 0.936 - - - - complement component 4 binding protein, alpha chain
54. BLVRA ENSGALG00000031786 23 0.935 - - - - - 0.935 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
55. ENSGALG00000002946 ENSGALG00000002946 56 0.934 - - - - - 0.934 - - - -
56. GPR158 ENSGALG00000007667 111 0.934 - - - - 0.934 - - - - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
57. PLEKHB1 ENSGALG00000017321 443 0.931 - - - - 0.931 - - - - - pleckstrin homology domain containing B1 [Source:NCBI gene;Acc:419064]
58. GTF3C4 ENSGALG00000031016 1221 0.931 - - - - - 0.931 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
59. KLHL40 ENSGALG00000005292 61 0.93 - - - - - 0.930 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
60. TPCN3 ENSGALG00000008198 124 0.929 - - - - - 0.929 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
61. ADNP2 ENSGALG00000035669 318 0.929 - - - - - 0.929 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
62. LRRC6 ENSGALG00000042548 227 0.929 - - - - 0.929 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
63. APTX ENSGALG00000001954 692 0.928 - - - - 0.928 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
64. NAT9 ENSGALG00000007723 2098 0.927 - - - - 0.927 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
65. CNN2 ENSGALG00000027777 512 0.927 - - - - 0.927 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
66. FAM183A 242 0.926 - - - - 0.926 - - - - - family with sequence similarity 183 member A, transcript variant 2
67. SMOC2 ENSGALG00000011205 340 0.926 - - - - - 0.926 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
68. KIAA1407 KIAA1407 252 0.925 - - - - 0.925 - - - - -
69. WHAMM ENSGALG00000006002 1678 0.924 - - - - - 0.924 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
70. DIAPH3 ENSGALG00000016937 1069 0.924 - - - - - 0.924 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
71. COBL ENSGALG00000013102 84 0.924 - - - - - 0.924 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
72. CCDC102A ENSGALG00000029999 324 0.924 - - - - 0.924 - - - - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
73. GOLGA1 ENSGALG00000001025 334 0.923 - - - - - 0.923 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
74. CAMLG ENSGALG00000006411 662 0.921 - - - - 0.921 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
75. MCC ENSGALG00000000208 61 0.918 - - - - - 0.918 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
76. GKAP1 ENSGALG00000012586 2908 0.918 - - - - 0.918 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
77. RIOK3 ENSGALG00000015004 4249 0.918 - - - - 0.918 - - - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
78. SCAF4 ENSGALG00000033965 2027 0.918 - - - - 0.918 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
79. DSEL ENSGALG00000042505 92 0.916 - - - - - 0.916 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
80. ELMSAN1 ENSGALG00000009282 79 0.914 - - - - - 0.914 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
81. AVL9 ENSGALG00000041568 1558 0.914 - - - - 0.914 - - - - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
82. ACP6 ENSGALG00000015485 3147 0.914 - - - - 0.914 - - - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
83. ENSGALG00000001346 ENSGALG00000001346 233 0.914 - - - - 0.914 - - - - -
84. TTC7A ENSGALG00000010020 793 0.914 - - - - - 0.914 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
85. PPM1M ENSGALG00000033277 556 0.913 - - - - 0.913 - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1M [Source:NCBI gene;Acc:415941]
86. C1orf50 ENSGALG00000004800 4894 0.913 - - - - 0.913 - - - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
87. ENSGALG00000020497 ENSGALG00000020497 446 0.913 - - - - 0.913 - - - - -
88. C9orf96 C9orf96 43 0.911 - - - - - 0.911 - - - -
89. LTC4SL ENSGALG00000011450 645 0.909 - - - - - 0.909 - - - - leukotriene C4 synthase-like, transcript variant X3
90. GYPC ENSGALG00000011566 99 0.909 - - - - - 0.909 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
91. CDC14A ENSGALG00000005248 502 0.908 - - - - - 0.908 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
92. GALNT16 ENSGALG00000009452 675 0.907 - - - - 0.907 - - - - - polypeptide N-acetylgalactosaminyltransferase 16 [Source:HGNC Symbol;Acc:HGNC:23233]
93. FDX1 ENSGALG00000026507 2573 0.904 - - - - 0.904 - - - - - ferredoxin 1 [Source:NCBI gene;Acc:373947]
94. NMB ENSGALG00000043506 1387 0.903 - - - - 0.903 - - - - - neuromedin B [Source:NCBI gene;Acc:415333]
95. SCARB2 ENSGALG00000011499 2763 0.903 - - - - 0.903 - - - - - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
96. CDC16 ENSGALG00000016816 2162 0.903 - - - - 0.903 - - - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
97. AASDHPPT ENSGALG00000027981 1017 0.902 - - - - 0.902 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
98. CCDC88A ENSGALG00000043587 2208 0.902 - - - - 0.902 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
99. SNRNP35 ENSGALG00000003318 1253 0.902 - - - - 0.902 - - - - - small nuclear ribonucleoprotein U11/U12 subunit 35 [Source:NCBI gene;Acc:416823]
100. MXRA5 ENSGALG00000016635 352 0.902 - - - - - 0.902 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]

There are 499 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA