Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SPIN4

Gene Name Gene ID Reads Annotation
SPIN4 SPIN4 120










Genes with expression patterns similar to SPIN4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SPIN4 SPIN4 120 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. FAM196A 82 1.755 0.832 - - - - - 0.923 - - family with sequence similarity 196 member A
3. crfb12 ENSDARG00000052413 47 1.748 0.892 - - - - 0.856 - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
4. nkx1.2la ENSDARG00000006350 76 1.739 0.903 - - - - - 0.836 - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
5. cart4 ENSDARG00000070142 55 1.728 0.892 - - - - - 0.836 - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
6. SDSL ENSDARG00000074698 34 1.723 0.923 - - - - 0.800 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
7. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.699 - - - - 0.725 - 0.974 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
8. PLEKHG3 72 1.686 0.886 - - - - 0.800 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
9. tbxas1 ENSDARG00000002249 55 1.667 0.892 - - - - 0.775 - - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
10. TBC1D10C ENSDARG00000037408 18 1.635 - - - - - 0.799 0.836 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
11. zgc:174563_1 zgc:174563_1 146 1.622 - 0.892 - - - - 0.730 - -
12. foxn4 ENSDARG00000010591 2332 1.617 0.790 - - - - - 0.827 - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
13. MPP3_1 MPP3_1 88 1.615 - - - - 0.769 - 0.846 - -
14. tbr1a ENSDARG00000076259 341 1.608 - - - - - 0.772 0.836 - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
15. ndor1 ENSDARG00000007429 113 1.599 0.874 0.725 - - - - - - - NADPH dependent diflavin oxidoreductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1555]
16. CABZ01054962.1 CABZ01054962.1 91 1.593 - - - - 0.790 0.803 - - -
17. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.586 - - - - 0.716 0.870 - - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
18. ZNF337_7 ZNF337_7 198 1.584 - - - - 0.769 - 0.815 - -
19. zgc:123295 ENSDARG00000056324 361 1.583 0.833 - - - - 0.750 - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
20. nsl1 ENSDARG00000024471 1269 1.578 0.811 - - - - - 0.767 - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
21. si:ch211-102c2.4 ENSDARG00000079387 101 1.574 - - - - 0.741 0.833 - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
22. CABZ01065246.2 CABZ01065246.2 45 1.548 0.718 - - - - 0.830 - - -
23. si:ch211-135f11.1 166 1.542 - - - - 0.733 0.809 - - - si:ch211-135f11.1, transcript variant X3
24. gphnb ENSDARG00000100851 118 1.523 - - - - 0.773 - 0.750 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
25. med18 ENSDARG00000041237 247 1.522 - - - - 0.725 - 0.797 - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
26. gdf11 ENSDARG00000044924 534 1.517 - - - - 0.770 - 0.747 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
27. fbln5 ENSDARG00000039273 105 1.509 - - - - - 0.789 - - 0.720 fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
28. lifrb ENSDARG00000039863 102 1.498 0.783 - - - - 0.715 - - - leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
29. smad3b ENSDARG00000010207 951 1.476 0.730 - - - - - 0.746 - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
30. si:dkey-7e14.3 ENSDARG00000086055 50 1.475 - - - - 0.743 0.732 - - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
31. si:ch211-131e11.16 si:ch211-131e11.16 111 1.457 - - 0.727 - - - 0.730 - -
32. ANXA1 ANXA1 1103 1.441 0.710 - - - - 0.731 - - -
33. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - - - - - 1.000 - -
34. SLITRK4 ENSDARG00000079781 54 1 - - - - - - 1.000 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
35. b3galnt2 ENSDARG00000046133 68 1 - - - - - - 1.000 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
36. lgi3 ENSDARG00000041358 46 1 - - - - - - 1.000 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
37. AL929252.1 AL929252.1 81 1 - - - - - - 1.000 - -
38. KCNJ6 ENSDARG00000058985 71 1 - - - - - - 1.000 - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
39. CABZ01021538.1 CABZ01021538.1 67 1 - - - - - - 1.000 - -
40. MAPKBP1 ENSDARG00000103746 4 1 - - - - - - 1.000 - - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
41. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1 - - - - - - 1.000 - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
42. rtn4r ENSDARG00000090035 46 1 - - - - - - 1.000 - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
43. plcxd3 ENSDARG00000054794 112 1 - - - - - - 1.000 - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
44. dlgap3 ENSDARG00000055459 85 1 - - - - - - 1.000 - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
45. FUT9 FUT9 91 1 - - - - - - 1.000 - -
46. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1 - - - - - - 1.000 - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
47. prdm13 ENSDARG00000078701 205 1 - - - - - - 1.000 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
48. glrba ENSDARG00000052782, ENSDARG00000117018 4 1 - - - - - - 1.000 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
49. egr3 ENSDARG00000089156 71 1 - - - - - - 1.000 - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
50. LRCH4 ENSDARG00000068258 22 1 - - - - - - 1.000 - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
51. BRINP3 BRINP3 11 1 - - - - - - 1.000 - -
52. CDH12 CDH12 44 1 - - - - - - 1.000 - -
53. CU459160.1 CU459160.1 104 1 - - - - - - 1.000 - -
54. TRIM46 TRIM46 73 1 - - - - - - 1.000 - -
55. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 0.995 - - - - - - 0.995 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
56. btbd3b ENSDARG00000087517 107 0.991 - - - - - - 0.991 - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
57. cdk5r2a ENSDARG00000071011 167 0.991 - - - - - - 0.991 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
58. nrxn3b ENSDARG00000062693 192 0.984 - - - - - - 0.984 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
59. CR407704.1 CR407704.1 188 0.981 - - - - - - 0.981 - -
60. st8sia5 ENSDARG00000036584 529 0.981 - - - - - - 0.981 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
61. chrna2a ENSDARG00000006602 163 0.979 - - - - - - 0.979 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
62. THEM6 ENSDARG00000103914 49 0.978 - - - - - - 0.978 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
63. diras1a ENSDARG00000028066 126 0.978 - - - - - - 0.978 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
64. GABRG1 ENSDARG00000101995 201 0.977 - - - - - - 0.977 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
65. dync1i1 ENSDARG00000060948 554 0.976 - - - - - - 0.976 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
66. kif5c ENSDARG00000076027 424 0.974 - - - - - - 0.974 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
67. dnajc6 ENSDARG00000079891 438 0.97 - - - - - - 0.970 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
68. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.969 - - - - - - 0.969 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
69. NF1 NF1 62 0.965 - - - - - - 0.965 - -
70. CCSAP CCSAP 147 0.965 - - - - - - 0.965 - -
71. ATP6AP1L ATP6AP1L 164 0.965 - - - - - - 0.965 - -
72. kiaa1549la ENSDARG00000062477 143 0.965 - - - - - - 0.965 - - KIAA1549-like a [Source:ZFIN;Acc:ZDB-GENE-061207-55]
73. cuedc1a ENSDARG00000068716 232 0.965 - - - - - - 0.965 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
74. sv2c ENSDARG00000059997 592 0.963 - - - - - - 0.963 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
75. abhd3 ENSDARG00000018809 168 0.963 - - - - - - 0.963 - - abhydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-90]
76. her8.2 ENSDARG00000069675 315 0.961 - - - - - - 0.961 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
77. zgc:194665 ENSDARG00000004577 136 0.961 - - - - - - 0.961 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
78. TUBB8P7_1 TUBB8P7_1 2722 0.957 - - - - - - 0.957 - -
79. syn2a ENSDARG00000045945 434 0.957 - - - - - - 0.957 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
80. GADD45G GADD45G 382 0.956 - - - - - - 0.956 - -
81. c1qtnf4 ENSDARG00000024299 578 0.956 - - - - - - 0.956 - - C1q and TNF related 4 [Source:ZFIN;Acc:ZDB-GENE-050417-198]
82. SMARCAD1 SMARCAD1 104 0.955 - - - - - - 0.955 - -
83. kcnn1a ENSDARG00000091306 95 0.955 - - - - - - 0.955 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
84. prdm8 ENSDARG00000025017 370 0.952 - - - - - - 0.952 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
85. TMEM55B_1 TMEM55B_1 495 0.952 - - - - - - 0.952 - -
86. TRAK1 212 0.951 - - - - - - 0.951 - - trafficking protein, kinesin binding 1, transcript variant X6
87. jph3 ENSDARG00000102204 175 0.95 - - - - - - 0.950 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
88. acbd4 ENSDARG00000027070 52 0.95 - - - - - - 0.950 - - acyl-CoA binding domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2074]
89. EML6 250 0.95 - - - - - - 0.950 - - echinoderm microtubule associated protein like 6
90. upf3a ENSDARG00000069297, ENSDARG00000111067 196 0.949 - - - - - - 0.949 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
91. st6gal1 ENSDARG00000044514 142 0.949 - - - - - - 0.949 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
92. MAP6 MAP6 643 0.949 - - - - - - 0.949 - -
93. ZNF385C ENSDARG00000058154 478 0.948 - - - - - - 0.948 - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]
94. her13 ENSDARG00000007097 2000 0.948 - - - - - - 0.948 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
95. GADD45G_1 GADD45G_1 236 0.945 - - - - - - 0.945 - -
96. mpz ENSDARG00000038609 1740 0.945 - - - - - - 0.945 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
97. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 0.944 - - - - - - 0.944 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
98. si:dkey-175g6.2 ENSDARG00000086665 39 0.943 - - - - - - 0.943 - - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
99. si:ch211-242f23.8 ENSDARG00000087585 22 0.943 - - - - - - 0.943 - - si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
100. BSN_1 BSN_1 21 0.943 - - - - - - 0.943 - -

There are 1524 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA