Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SPICE1

Gene Name Gene ID Reads Annotation
SPICE1 ENSGALG00000045606 680 spindle and centriole associated protein 1, transcript variant X11











Genes with expression patterns similar to SPICE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPICE1 ENSGALG00000045606 680 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spindle and centriole associated protein 1, transcript variant X11
2. PLAC8 PLAC8 20 0.904 - - - - - - - 0.904 - -
3. ASL1 ENSGALG00000002558 78 0.888 - - - - - - - 0.888 - - argininosuccinate lyase 1 [Source:NCBI gene;Acc:396498]
4. UPB1 ENSGALG00000006627 139 0.843 - - - - - - - 0.843 - - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
5. DNAL1 ENSGALG00000028568 124 0.84 - - - - - - - 0.840 - - dynein axonemal light chain 1 [Source:NCBI gene;Acc:423246]
6. AP4E1 2726 0.838 - - - - - - - - 0.838 - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
7. ZBTB34 ENSGALG00000023407 198 0.829 - - - - - - - 0.829 - - zinc finger and BTB domain containing 34 [Source:NCBI gene;Acc:417090]
8. ERAP1 ENSGALG00000014684 713 0.821 - - - - - - - - 0.821 - endoplasmic reticulum aminopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:18173]
9. PVALB1 PVALB1 267 0.82 - - - - - - - 0.820 - -
10. PIK3CB ENSGALG00000005505 338 0.812 - - - - - - - 0.812 - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta [Source:NCBI gene;Acc:424826]
11. ZC3HAV1 ENSGALG00000013911 162 0.811 - - - - - - - - 0.811 - zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
12. NT5C1B ENSGALG00000016471 1378 0.801 - - - - - - - - 0.801 - 5'-nucleotidase, cytosolic IB
13. TTLL12 ENSGALG00000014167 714 0.799 - - - - - - - - 0.799 - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
14. MRGBP ENSGALG00000005531 79 0.794 - - - - - - - - 0.794 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
15. BTK ENSGALG00000004958 272 0.792 - - - - - - - 0.792 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
16. SLC10A7 ENSGALG00000010006 2064 0.79 - - - - - - - - 0.790 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
17. SENP7 ENSGALG00000044642 48 0.79 - - - - - - - 0.790 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
18. TK1 ENSGALG00000007191 277 0.786 - - - - - - - 0.786 - - thymidine kinase 1 [Source:NCBI gene;Acc:395719]
19. BRD1 ENSGALG00000029379 6047 0.785 - - - - - - - - 0.785 - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
20. PLEKHH3 ENSGALG00000037269 875 0.784 - - - - - - - - 0.784 - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
21. MFSD7 209 0.782 - - - - - - - 0.782 - - major facilitator superfamily domain containing 7, transcript variant X2
22. TCAIM ENSGALG00000011498 30 0.781 - - - - - - 0.781 - - - T-cell activation inhibitor, mitochondrial [Source:NCBI gene;Acc:420670]
23. TRIM27.1 ENSGALG00000030397 19 0.781 - - - - - - 0.781 - - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
24. AK3 ENSGALG00000014447 1855 0.78 - - - - - - - - 0.780 - adenylate kinase 3 [Source:HGNC Symbol;Acc:HGNC:17376]
25. DEF8 ENSGALG00000025712 790 0.779 - - - - - - - - 0.779 - differentially expressed in FDCP 8 homolog [Source:HGNC Symbol;Acc:HGNC:25969]
26. COL24A1 ENSGALG00000006864 161 0.778 - - - - - - - - 0.778 - collagen type XXIV alpha 1 chain, transcript variant X4
27. FLCN ENSGALG00000004816 4101 0.775 - - - - - - - - 0.775 - folliculin, transcript variant X1
28. ENSGALG00000018372 ENSGALG00000018372 61 0.774 - - - - - 0.774 - - - -
29. CASKIN1 604 0.772 - - - - - - - - 0.772 - CASK interacting protein 1, transcript variant X4
30. EGLN3 ENSGALG00000010001 32 0.771 - - - - - - - 0.771 - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
31. PLCXD3 ENSGALG00000014845 247 0.769 - - - - - - - - 0.769 - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
32. CYP2J22 ENSGALG00000011394 76 0.768 - - - - - - - 0.768 - - Gallus gallus cytochrome P450, family 2, subfamily J, polypeptide 22 (CYP2J22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329480]
33. TOR2A ENSGALG00000026424 1182 0.767 - - - - - - - 0.767 - - torsin family 2 member A [Source:HGNC Symbol;Acc:HGNC:11996]
34. SNORD38 SNORD38 537 0.766 - - - - - - - - 0.766 -
35. PLIN3 ENSGALG00000044632 370 0.762 - - - - - - - - 0.762 - perilipin 3, transcript variant X2
36. NECAP2 ENSGALG00000003745 4899 0.762 - - - - - - - - 0.762 - NECAP endocytosis associated 2 [Source:NCBI gene;Acc:419464]
37. EEPD1 ENSGALG00000039983 528 0.761 - - - - - - - 0.761 - - endonuclease/exonuclease/phosphatase family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22223]
38. FLII ENSGALG00000004997 623 0.76 - - - - - - - - 0.760 - FLII, actin remodeling protein [Source:NCBI gene;Acc:416515]
39. DHX58 ENSGALG00000023821 15 0.759 - - - - - - - 0.759 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
40. CPB1 ENSGALG00000006834 25 0.759 - - - - - - - 0.759 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
41. KLF11 ENSGALG00000016440 65 0.759 - - - - - - - 0.759 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
42. ENSGALG00000018499 ENSGALG00000018499 100 0.759 - - - - - - - 0.759 - -
43. UBE3C ENSGALG00000006461 57 0.759 - - - - - - - 0.759 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
44. TAGAP ENSGALG00000013747 34 0.759 - - - - - - - 0.759 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
45. NCKAP5 ENSGALG00000012177, ENSGALG00000045368 266 0.757 - - - - - - - - 0.757 - NCK associated protein 5, transcript variant X8
46. ADI1 ENSGALG00000025796 8636 0.754 - - - - - - - - 0.754 - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
47. KLC1 ENSGALG00000011528 1621 0.753 - - - - - - - - 0.753 - kinesin light chain 1, transcript variant X6
48. gga-mir-454 ENSGALG00000033526 22 0.753 - - - - - - - 0.753 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
49. SAMSN1 ENSGALG00000040926 88 0.753 - - - - - - - 0.753 - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
50. IRF-4 IRF-4 19 0.752 - - - - - - - 0.752 - -
51. MGEA5 116 0.749 - - - - - - - 0.749 - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X1
52. SORD ENSGALG00000031408 2119 0.748 - - - - - - - - 0.748 - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
53. NCL ENSGALG00000032930 66655 0.747 - - - - - - - - 0.747 - nucleolin [Source:NCBI gene;Acc:396201]
54. PPP2CA ENSGALG00000006462 26306 0.747 - - - - - - - - 0.747 - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
55. ENSGALG00000012518 ENSGALG00000012518 25 0.745 - - - - - - - 0.745 - -
56. HMGXB3 ENSGALG00000005770 119 0.742 - - - - - - - 0.742 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
57. ANKRD26 ENSGALG00000009104 71 0.74 - - - - - - - 0.740 - - ankyrin repeat domain 26 [Source:NCBI gene;Acc:417764]
58. NUAK1 ENSGALG00000012662 411 0.74 - - - - - - - - 0.740 - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
59. PSTPIP2 ENSGALG00000040136 37 0.739 - - - - - - - 0.739 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
60. C7 ENSGALG00000014835 322 0.739 - - - - - - - - 0.739 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
61. SH3GL1 ENSGALG00000001121 159 0.738 - - - - - - - 0.738 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
62. HAGH ENSGALG00000005398 168 0.738 - - - - - - - 0.738 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
63. ZNF618 ENSGALG00000008886 1326 0.737 - - - - - - - - 0.737 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
64. GJC1 ENSGALG00000000997 2279 0.736 - - - - - - - 0.736 - - gap junction protein gamma 1 [Source:NCBI gene;Acc:396501]
65. FMR1 ENSGALG00000009177 561 0.735 - - - - - - - 0.735 - - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
66. gga-mir-6681 ENSGALG00000027840 546 0.735 - - - - - - - - 0.735 - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
67. HNRNPK ENSGALG00000012591 1109 0.734 - - - - - - - - 0.734 - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
68. VIP ENSGALG00000013604 153 0.734 - - - - - - - 0.734 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
69. CARHSP1 ENSGALG00000042981 6920 0.733 - - - - - - - - 0.733 - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
70. KIN ENSGALG00000030702 1608 0.731 - - - - - - - 0.731 - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
71. FAT4 ENSGALG00000011823 774 0.73 - - - - - - - 0.730 - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
72. ZDHHC20 ENSGALG00000017126 58 0.73 - - - - - - - 0.730 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
73. HOTAIRM1 HOTAIRM1 4335 0.729 - - - - - - - - 0.729 -
74. PARM1 ENSGALG00000010268 13 0.727 - - - - - - - 0.727 - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
75. FAM19A4 ENSGALG00000042228 1724 0.727 - - - - - - - - 0.727 - family with sequence similarity 19 member A4, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21591]
76. SLC35C1 ENSGALG00000008438 486 0.726 - - - - - - - 0.726 - - solute carrier family 35 member C1 [Source:NCBI gene;Acc:423203]
77. HERC1 ENSGALG00000003381 672 0.724 - - - - - - - - 0.724 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X8
78. GBP1 ENSGALG00000000720 55 0.724 - - - - - - - 0.724 - - guanylate binding protein 1
79. MST4 MST4 1931 0.723 - - - - - - - - 0.723 -
80. PPP2CA_1 ENSGALG00000006462 3170 0.723 - - - - - - - 0.723 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
81. GUCY1A3 718 0.722 - - - - - - - - 0.722 - guanylate cyclase 1 soluble subunit alpha, transcript variant X2
82. HAS2 ENSGALG00000029596 4192 0.722 - - - - - - - - 0.722 - hyaluronan synthase 2 [Source:NCBI gene;Acc:395594]
83. OGFOD3 ENSGALG00000001618 2438 0.721 - - - - - - - - 0.721 - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
84. REEP2 ENSGALG00000017365 338 0.721 - - - - - - - 0.721 - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
85. USP8 ENSGALG00000005894 4499 0.721 - - - - - - - - 0.721 - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
86. gga-mir-1306 ENSGALG00000025271 1231 0.72 - - - - - - - - 0.720 - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
87. CYB5R3 ENSGALG00000014122 7664 0.72 - - - - - - - - 0.720 - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
88. FBXO22 ENSGALG00000039897 377 0.72 - - - - - - - 0.720 - - F-box protein 22 [Source:NCBI gene;Acc:415355]
89. CALCOCO2 ENSGALG00000001525 3121 0.719 - - - - - - - - 0.719 - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
90. EPC1 ENSGALG00000007169 101 0.719 - - - - - - - 0.719 - - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
91. TIPIN ENSGALG00000007649 3565 0.719 - - - - - - - - 0.719 - TIMELESS interacting protein [Source:NCBI gene;Acc:415548]
92. ENSGALG00000006277 ENSGALG00000006277 284 0.717 - - - - - - 0.717 - - -
93. PDE10A ENSGALG00000011537 642 0.717 - - - - - - - - 0.717 - phosphodiesterase 10A [Source:HGNC Symbol;Acc:HGNC:8772]
94. ZFC3H1 ENSGALG00000010177 1326 0.717 - - - - - - - 0.717 - - zinc finger C3H1-type containing [Source:HGNC Symbol;Acc:HGNC:28328]
95. CDK10 ENSGALG00000006144 2424 0.715 - - - - - - - - 0.715 - cyclin dependent kinase 10 [Source:NCBI gene;Acc:415840]
96. TRUB1 ENSGALG00000009091 1005 0.712 - - - - - - - - 0.712 - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
97. BICD1 ENSGALG00000012934 112 0.712 - - - - - - - - 0.712 - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
98. PDXK ENSGALG00000016205 26 0.711 - - - - - - - 0.711 - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
99. YBX1 ENSGALG00000004848 20992 0.711 - - - - - - - - 0.711 - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
100. COL3A1 ENSGALG00000035584 39 0.711 - - - - - - - 0.711 - - collagen type III alpha 1 chain [Source:NCBI gene;Acc:396340]

There are 17 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA