Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPG21

Gene Name Gene ID Reads Annotation
SPG21 ENSGALG00000007262 8050 SPG21, maspardin [Source:NCBI gene;Acc:415526]











Genes with expression patterns similar to SPG21

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPG21 ENSGALG00000007262 8050 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SPG21, maspardin [Source:NCBI gene;Acc:415526]
2. LEPROT ENSGALG00000011047 7132 2.21 - - 0.718 - - - 0.726 - - 0.766 leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
3. PGAM5 ENSGALG00000002137 7700 1.822 - - - - 0.974 - - 0.848 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
4. ATP5C1 53961 1.779 - - - - 0.907 - - - - 0.872 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
5. ETF1 ENSGALG00000002262 14560 1.744 - - - - 0.978 - - 0.766 - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
6. UBE2G2 ENSGALG00000005667 12689 1.737 - - - - 0.984 - 0.753 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
7. OAF ENSGALG00000006715 12518 1.732 - - - - 0.975 - - 0.757 - - out at first homolog [Source:NCBI gene;Acc:395161]
8. BRP44L BRP44L 30452 1.726 - - - - 0.968 - 0.758 - - -
9. MTERFD1 MTERFD1 3640 1.717 - - - - - - - 0.827 - 0.890
10. MRPL46 ENSGALG00000006782 5033 1.705 - - - - 0.988 - 0.717 - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
11. XRN2 ENSGALG00000008372 22164 1.7 - - - - 0.929 - 0.771 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
12. CCDC59 ENSGALG00000028648 9272 1.693 - - - - 0.989 - 0.704 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
13. CWC22 ENSGALG00000009001 5984 1.693 - - - - 0.974 - - - - 0.719 CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
14. DNAJC2 ENSGALG00000008249 28064 1.691 - - - - 0.983 - - - - 0.708 DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
15. SEC63 ENSGALG00000015308 11596 1.69 - - - - 0.978 - 0.712 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
16. KCTD6 ENSGALG00000007111 3557 1.688 - - - - - - 0.745 0.943 - - potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]
17. LEPREL4 LEPREL4 5609 1.675 - - - - - - 0.779 0.896 - -
18. CKAP2 ENSGALG00000017025 25020 1.674 - - - - - - - 0.837 - 0.837 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
19. TXNDC5 ENSGALG00000012784 4678 1.667 - - - - - - - 0.838 - 0.829 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
20. ASB9 ENSGALG00000016563 2780 1.646 - - - - - - - 0.856 - 0.790 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
21. PSMB2 ENSGALG00000026421 51885 1.642 - - - - 0.817 - 0.825 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
22. UTP6 ENSGALG00000003260 4909 1.641 - - - - - - 0.702 0.939 - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
23. SMC6 ENSGALG00000016467 3321 1.641 - - - - - - - 0.805 - 0.836 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
24. AHCTF1 ENSGALG00000010630 4809 1.637 - - - - - - 0.789 0.848 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
25. CAMSAP2 ENSGALG00000002145 6109 1.632 - - - - - - - 0.832 - 0.800 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
26. YIPF3 ENSGALG00000041037 6126 1.631 - - - - - - 0.809 - - 0.822 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
27. SMARCC1 ENSGALG00000032642 4842 1.625 - - - - - - - 0.802 - 0.823 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
28. SCO1 ENSGALG00000030475 7304 1.625 - - - - - - 0.786 0.839 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
29. MED24 ENSGALG00000013506 5403 1.611 - - - - - - - 0.820 - 0.791 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
30. CHRAC1 ENSGALG00000040823 5695 1.609 - - - - - - 0.769 - - 0.840 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
31. ITGA9 ENSGALG00000029378 415 1.608 - - - - - - - 0.778 - 0.830 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
32. COX5A ENSGALG00000014121 55281 1.607 - - - - 0.825 - - - - 0.782 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
33. KHDRBS1 ENSGALG00000003272 4249 1.596 - - - - - - - 0.801 - 0.795 KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
34. UBE2D1 ENSGALG00000021213 5876 1.587 - - - - - - 0.719 0.868 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
35. CHMP6 ENSGALG00000026428 18026 1.584 - - - - - - 0.725 0.859 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
36. UCHL3 ENSGALG00000016921 16208 1.582 - - - - - - 0.750 - - 0.832 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
37. RPF2 ENSGALG00000037087 12788 1.581 - - - - - - 0.857 - - 0.724 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
38. GXYLT1 ENSGALG00000009532 5682 1.58 - - - - - - 0.740 - - 0.840 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
39. ERGIC2 ENSGALG00000007183 12870 1.573 - - - - - - 0.717 0.856 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
40. MAN2A1 ENSGALG00000000255 4543 1.571 - - - - - - 0.746 - - 0.825 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
41. SMDT1 ENSGALG00000011897 9360 1.571 - - - - - - - 0.843 - 0.728 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
42. FXR1 ENSGALG00000008864 10250 1.559 - - - - - - 0.716 0.843 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
43. RAB10 ENSGALG00000016535 5272 1.556 - - - - - - 0.702 - - 0.854 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
44. MB21D1 2460 1.553 - - - - - - 0.737 - - 0.816 Mab-21 domain containing 1
45. ARL13B ENSGALG00000015412 2968 1.55 - - - - - - 0.751 - - 0.799 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
46. MRPL37 ENSGALG00000010761 10596 1.548 - - - - 0.800 - 0.748 - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
47. AGPS ENSGALG00000009236 2250 1.546 - - - - - - 0.708 - - 0.838 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
48. CTSC ENSGALG00000017239 7651 1.545 - - - - - - 0.720 0.825 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
49. MRPL20 ENSGALG00000001542 28764 1.542 - - - - - - 0.746 0.796 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
50. PPCS ENSGALG00000004882 5759 1.542 - - - - - - 0.726 0.816 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
51. RUVBL1 ENSGALG00000005931 9379 1.539 - - - - - - 0.781 0.758 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
52. MRPL50 ENSGALG00000015543 11649 1.538 - - - - - - 0.702 - - 0.836 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
53. TMX3 ENSGALG00000013757 6387 1.533 - - - - - - 0.759 - - 0.774 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
54. SMC4 ENSGALG00000009553 15715 1.532 - - - - - - 0.759 - - 0.773 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
55. RAD50 ENSGALG00000006794 4308 1.532 - - - - - - 0.731 - - 0.801 RAD50 double strand break repair protein, transcript variant X4
56. HSPA4 ENSGALG00000040882 20966 1.531 - - - - - - 0.797 - - 0.734 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
57. PDHA1 ENSGALG00000016430 7070 1.529 - - - - - - 0.725 0.804 - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
58. NRSN1 ENSGALG00000037811 11424 1.522 - - - - 0.773 - 0.749 - - - neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
59. WFDC1 ENSGALG00000005503 6152 1.504 - - - - - - 0.716 - - 0.788 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
60. COL5A2 ENSGALG00000031112 18358 1.5 - - - - - - 0.749 - - 0.751 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
61. SLC25A13 ENSGALG00000009728 8858 1.495 - - - - - - 0.781 - - 0.714 solute carrier family 25 member 13 [Source:NCBI gene;Acc:428427]
62. FANCL ENSGALG00000030022 7423 1.49 - - - - - - 0.730 - - 0.760 FA complementation group L [Source:NCBI gene;Acc:421202]
63. QDPR ENSGALG00000030070 6953 1.49 - - - - - - 0.718 - - 0.772 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
64. NAA38 ENSGALG00000045783 11229 1.48 - - - - - - 0.754 0.726 - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
65. GTF2F2 ENSGALG00000016974 7524 1.464 - - - - - - 0.702 - - 0.762 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
66. CPD ENSGALG00000004295 8199 1.456 - - - - - - 0.706 - - 0.750 carboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]
67. ENSGALG00000014171 ENSGALG00000014171 10383 1.45 - - - - - - 0.731 - - 0.719
68. LSM6 ENSGALG00000009985 18582 1.449 - - - - - - 0.707 - - 0.742 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
69. DGCR2 ENSGALG00000005891 8405 1.446 - - - - - - 0.721 - - 0.725 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
70. COMMD7 ENSGALG00000006630 11491 1.44 - - - - - - 0.711 - - 0.729 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
71. TIAR TIAR 2471 1.437 - - - - - - - - 0.700 0.737
72. C15H12ORF49 C15H12ORF49 13250 0.993 - - - - 0.993 - - - - -
73. TNPO3 ENSGALG00000039420 5178 0.993 - - - - 0.993 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
74. RAE1 ENSGALG00000007653 8930 0.992 - - - - 0.992 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
75. PHKA1 ENSGALG00000004801 2510 0.992 - - - - 0.992 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
76. HTRA3 ENSGALG00000034673 512 0.992 - - - - 0.992 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
77. AGPAT3 ENSGALG00000031932 6903 0.992 - - - - 0.992 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
78. gga-mir-6584 ENSGALG00000028834 1481 0.991 - - - - 0.991 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
79. NDST2 ENSGALG00000005107 4224 0.99 - - - - 0.990 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
80. PPAPDC1B PPAPDC1B 6698 0.99 - - - - 0.990 - - - - -
81. UQCRC2 ENSGALG00000002490 23477 0.99 - - - - 0.990 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
82. MYEOV2 MYEOV2 5155 0.99 - - - - 0.990 - - - - -
83. VPS8 ENSGALG00000006704 5419 0.99 - - - - 0.990 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
84. RILPL2 ENSGALG00000003321 5632 0.989 - - - - 0.989 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
85. IBA57 ENSGALG00000005328 4362 0.989 - - - - 0.989 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
86. HYOU1 ENSGALG00000007659 3555 0.989 - - - - 0.989 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
87. WHSC1L1 4065 0.989 - - - - 0.989 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
88. EPB41L1 ENSGALG00000034171 3616 0.989 - - - - 0.989 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
89. TMEM39B ENSGALG00000003287 4125 0.989 - - - - 0.989 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
90. SEC61A2 ENSGALG00000036300 4235 0.989 - - - - 0.989 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
91. RNF113A ENSGALG00000000538 3985 0.988 - - - - 0.988 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
92. MRPL22 ENSGALG00000003919 2760 0.988 - - - - 0.988 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
93. NOL6 ENSGALG00000030730 7191 0.988 - - - - 0.988 - - - - - nucleolar protein 6
94. TBC1D7 ENSGALG00000012731 4891 0.988 - - - - 0.988 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
95. MED1 ENSGALG00000001708 9556 0.988 - - - - 0.988 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
96. BCL9 ENSGALG00000037655 4620 0.987 - - - - 0.987 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
97. ABCC1 ENSGALG00000006646 2596 0.987 - - - - 0.987 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
98. KCTD9 ENSGALG00000000275 3455 0.986 - - - - 0.986 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
99. M6PR ENSGALG00000031681 9442 0.985 - - - - 0.985 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
100. HMGB3 ENSGALG00000009071 12011 0.985 - - - - 0.985 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]

There are 931 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA