Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SPG21

Gene Name Gene ID Reads Annotation
SPG21 ENSDARG00000007760 645 spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]










Genes with expression patterns similar to SPG21

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SPG21 ENSDARG00000007760 645 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
2. impad1 ENSDARG00000058114 667 2.326 0.911 0.704 - - - 0.711 - - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
3. plekhf2 ENSDARG00000021141 529 1.825 0.938 0.887 - - - - - - - pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
4. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.743 0.907 0.836 - - - - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
5. lgmn ENSDARG00000039150 2788 1.732 0.882 0.850 - - - - - - - legumain [Source:ZFIN;Acc:ZDB-GENE-021030-1]
6. TMEM14A ENSDARG00000095157 611 1.725 0.798 - - - - - 0.927 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
7. arhgef25b ENSDARG00000014465 669 1.723 0.838 0.885 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
8. st7l ENSDARG00000032603 528 1.705 0.932 0.773 - - - - - - - suppression of tumorigenicity 7 like [Source:ZFIN;Acc:ZDB-GENE-080219-43]
9. slc40a1 ENSDARG00000000241 4882 1.686 0.795 - - - - - 0.891 - - solute carrier family 40 (iron-regulated transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-000511-8]
10. AL954697.2 AL954697.2 1809 1.682 0.819 0.863 - - - - - - -
11. nenf ENSDARG00000040192 599 1.679 0.948 - - - - 0.731 - - - neudesin neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-050320-129]
12. aff2 ENSDARG00000052242 540 1.676 0.888 - - - - - 0.788 - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
13. slc22a6l ENSDARG00000055523 370 1.668 0.835 - - - - - 0.833 - - solute carrier family 22 (organic anion transporter), member 6, like [Source:ZFIN;Acc:ZDB-GENE-040426-2249]
14. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.667 0.854 0.813 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
15. afmid ENSDARG00000099106 166 1.641 0.881 0.760 - - - - - - - arylformamidase [Source:ZFIN;Acc:ZDB-GENE-050417-166]
16. por por 1211 1.635 0.896 - - - - - 0.739 - -
17. nsrp1 ENSDARG00000015221 1598 1.628 0.796 0.832 - - - - - - - nuclear speckle splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2646]
18. synj2bp ENSDARG00000028321 1143 1.608 - 0.831 - - - - 0.777 - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
19. cpm ENSDARG00000011769, ENSDARG00000113736 1113 1.605 - 0.893 - - - - 0.712 - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
20. sh3gl3a ENSDARG00000013360 3602 1.602 - 0.893 - - - 0.709 - - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
21. tp53i11b ENSDARG00000006025 569 1.583 - - - - - 0.779 0.804 - - tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
22. cry-dash ENSDARG00000002396 312 1.58 - 0.810 - - - - 0.770 - - cryptochrome DASH [Source:ZFIN;Acc:ZDB-GENE-040617-2]
23. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 1.579 0.785 0.794 - - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
24. CT956064.5 CT956064.5 619 1.574 0.707 0.867 - - - - - - -
25. prrg4 ENSDARG00000030753 1008 1.56 0.804 0.756 - - - - - - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
26. BX510999.1 BX510999.1 412 1.553 - 0.729 - - - - 0.824 - -
27. ap5m1 ENSDARG00000031533 153 1.548 - 0.842 - - - 0.706 - - - adaptor related protein complex 5 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-050522-231]
28. pfas ENSDARG00000003750 296 1.546 - 0.846 - - - - 0.700 - - phosphoribosylformylglycinamidine synthase [Source:ZFIN;Acc:ZDB-GENE-030131-4420]
29. bcat2 ENSDARG00000054849 4317 1.53 0.774 - - - - 0.756 - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
30. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 1.522 - 0.807 - - - 0.715 - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
31. zgc:154018 zgc:154018 362 1.519 - 0.794 - - - - 0.725 - -
32. wdfy1 ENSDARG00000005425 3628 1.516 0.804 - - - - - 0.712 - - WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
33. vps9d1 ENSDARG00000019195 582 1.516 0.800 0.716 - - - - - - - VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]
34. fbp1a ENSDARG00000021366 1778 1.514 - 0.745 - - - 0.769 - - - fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
35. fdps ENSDARG00000040890 4000 1.51 0.716 0.794 - - - - - - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
36. CSMD3 CSMD3 0 1.5 - - 0.771 - - 0.729 - - -
37. zgc:55512 zgc:55512 4436 1.491 0.715 - - - - 0.776 - - -
38. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.491 0.710 0.781 - - - - - - - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
39. copz1 ENSDARG00000017844 7277 1.489 0.786 - - - - 0.703 - - - coatomer protein complex, subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-000406-6]
40. rc3h1 rc3h1 1087 1.484 - 0.759 - - - - 0.725 - -
41. ppt1 ENSDARG00000039980 1599 1.476 0.764 - - - - - 0.712 - - palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
42. arl14ep ENSDARG00000001210 3029 1.473 0.710 0.763 - - - - - - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
43. CU695232.1 ENSDARG00000098286 1266 1.471 - 0.766 - - - 0.705 - - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
44. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 1.469 - - - 0.700 - 0.769 - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
45. PCOLCE_1 PCOLCE_1 2148 1.469 - 0.745 - - - - 0.724 - -
46. GATC ENSDARG00000056855 551 1.468 - - - 0.753 - 0.715 - - - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
47. btbd2 btbd2 1296 1.46 - 0.753 - 0.707 - - - - -
48. CABZ01009712.1 CABZ01009712.1 1284 1.446 - - - - - 0.740 0.706 - -
49. emc9 ENSDARG00000034633 686 1.437 - 0.706 - - - 0.731 - - - ER membrane protein complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-040426-693]
50. tfap2e ENSDARG00000008861 497 1.435 - - - 0.704 - - 0.731 - - transcription factor AP-2 epsilon [Source:ZFIN;Acc:ZDB-GENE-040426-1455]
51. plxnb2a ENSDARG00000003811, ENSDARG00000094799 1662 1.427 - 0.712 - - - - 0.715 - - plexin b2a [Source:ZFIN;Acc:ZDB-GENE-030131-8917]
52. n4bp2 ENSDARG00000061451, ENSDARG00000113406 238 0.975 0.975 - - - - - - - - NEDD4 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-061103-451]
53. zp2.3 ENSDARG00000090237 45 0.967 0.967 - - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
54. esrrgb ENSDARG00000011696 108 0.961 0.961 - - - - - - - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
55. TULP3 TULP3 433 0.957 0.957 - - - - - - - -
56. TM2D2 ENSDARG00000035515 561 0.955 0.955 - - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
57. hps3 ENSDARG00000015749 481 0.95 0.950 - - - - - - - - Hermansky-Pudlak syndrome 3 [Source:ZFIN;Acc:ZDB-GENE-061110-115]
58. ankib1b ENSDARG00000076829 677 0.949 0.949 - - - - - - - - ankyrin repeat and IBR domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-100920-6]
59. SIRT5 ENSDARG00000039684 1124 0.948 0.948 - - - - - - - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
60. larp6 1695 0.948 0.948 - - - - - - - - La ribonucleoprotein domain family, member 6
61. cpt1a cpt1a 674 0.947 0.947 - - - - - - - -
62. gusb ENSDARG00000063126 867 0.945 0.945 - - - - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
63. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 0.945 0.945 - - - - - - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
64. pigq ENSDARG00000038097 486 0.945 0.945 - - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class Q [Source:ZFIN;Acc:ZDB-GENE-030131-9793]
65. hps5 ENSDARG00000071062 273 0.944 0.944 - - - - - - - - Hermansky-Pudlak syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-070410-80]
66. CT030712.1 ENSDARG00000044355 83 0.944 - - - - 0.944 - - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
67. pipox ENSDARG00000055591 260 0.944 0.944 - - - - - - - - pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
68. sft2d3 ENSDARG00000070284 351 0.94 0.940 - - - - - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
69. PTDSS2 ENSDARG00000101018 881 0.939 0.939 - - - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
70. wu:fb12e11 wu:fb12e11 2332 0.934 0.934 - - - - - - - -
71. ACTR3 ENSDARG00000091138 1739 0.933 0.933 - - - - - - - - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
72. ZFHX3 ENSDARG00000103057 7759 0.933 - 0.933 - - - - - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
73. fzd7b ENSDARG00000027589 2562 0.931 0.931 - - - - - - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
74. rdh5 ENSDARG00000008306 272 0.929 0.929 - - - - - - - - retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]
75. si:dkey-164n2.1 47 0.927 0.927 - - - - - - - - si:dkey-164n2.1, transcript variant X1
76. degs2 ENSDARG00000042544 1912 0.927 0.927 - - - - - - - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
77. baiap2l1a ENSDARG00000029305 30 0.927 0.927 - - - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
78. mnd1 ENSDARG00000074451 182 0.927 0.927 - - - - - - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
79. C17H14orf1 C17H14orf1 256 0.927 0.927 - - - - - - - -
80. pou5f3 ENSDARG00000044774 212 0.927 0.927 - - - - - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
81. moxd1 ENSDARG00000031136, ENSDARG00000111773 112 0.927 0.927 - - - - - - - - monooxygenase, DBH-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9320]
82. TMEM220 ENSDARG00000088981 28 0.927 0.927 - - - - - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
83. si:dkey-58f10.12 ENSDARG00000092680 258 0.927 0.927 - - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
84. si:dkey-7i1.4 si:dkey-7i1.4 77 0.927 0.927 - - - - - - - -
85. si:ch211-191a16.5 ENSDARG00000096545 45 0.927 0.927 - - - - - - - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
86. TMEM151A ENSDARG00000077986 78 0.926 0.926 - - - - - - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
87. tvp23b ENSDARG00000057060 361 0.926 0.926 - - - - - - - - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
88. CDH26 CDH26 938 0.926 0.926 - - - - - - - -
89. CU468896.2 CU468896.2 38 0.926 0.926 - - - - - - - -
90. gpr78 gpr78 135 0.925 0.925 - - - - - - - -
91. acp6 ENSDARG00000040064 197 0.925 0.925 - - - - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
92. CABZ01020207.1 CABZ01020207.1 145 0.925 0.925 - - - - - - - -
93. rnf152 ENSDARG00000087782 141 0.925 0.925 - - - - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
94. zgc:101562 ENSDARG00000040179 90 0.925 0.925 - - - - - - - - zgc:101562 [Source:ZFIN;Acc:ZDB-GENE-041010-74]
95. TMEM55B TMEM55B 76 0.925 0.925 - - - - - - - -
96. si:ch211-229b6.1 ENSDARG00000093422 151 0.924 0.924 - - - - - - - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
97. RFESD_1 RFESD_1 65 0.924 0.924 - - - - - - - -
98. lyst ENSDARG00000008575, ENSDARG00000113634 55 0.924 0.924 - - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
99. nek1 ENSDARG00000022350 158 0.924 0.924 - - - - - - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
100. brf1a ENSDARG00000017835 206 0.924 0.924 - - - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]

There are 1222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA