Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPG11

Gene Name Gene ID Reads Annotation
SPG11 ENSGALG00000008180 1890 SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]











Genes with expression patterns similar to SPG11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPG11 ENSGALG00000008180 1890 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
2. TUBA4A ENSGALG00000000433 1367 1.742 - - 0.848 - - - 0.894 - - - tubulin alpha 4a
3. CHAMP1 ENSGALG00000016813 508 1.738 - - 0.878 0.860 - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
4. SELM SELM 6366 1.729 - - 0.841 - - - 0.888 - - -
5. URM1 ENSGALG00000004971 17880 1.69 - - 0.834 - - - 0.856 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
6. WDR92 ENSGALG00000008760 3934 1.675 - - 0.907 - - - 0.768 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
7. SMOC2 ENSGALG00000011205 340 1.669 - - 0.857 0.812 - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
8. MPST ENSGALG00000040840 2122 1.656 - - - - - - 0.912 0.744 - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
9. MTHFSD ENSGALG00000033322 824 1.656 - - 0.831 0.825 - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
10. SQLE ENSGALG00000036915 4172 1.636 - - 0.775 - - - 0.861 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
11. RAB3IP ENSGALG00000009959 1652 1.621 - - 0.815 - - - 0.806 - - - RAB3A interacting protein, transcript variant X1
12. UFL1 ENSGALG00000015580 3845 1.614 - - 0.886 - - - - 0.728 - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
13. PHACTR4 ENSGALG00000042485 3523 1.611 - - - - - - 0.872 0.739 - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
14. WSB2 ENSGALG00000008151 13246 1.578 - - 0.783 - - - - 0.795 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
15. CSTF3 ENSGALG00000011685 4711 1.562 - - 0.700 - - - 0.862 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
16. RBX1 ENSGALG00000011993 26090 1.545 - - 0.800 0.745 - - - - - - ring-box 1 [Source:NCBI gene;Acc:418001]
17. NUDCD2 ENSGALG00000001726 6303 1.542 - - 0.778 - - - - - 0.764 - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
18. ZDHHC7 ENSGALG00000042522 1774 1.517 - - 0.786 0.731 - - - - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
19. TMEM175 ENSGALG00000015368 3342 1.517 - - 0.816 0.701 - - - - - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
20. SHROOM2 ENSGALG00000030802 4517 1.5 - - 0.719 - - - 0.781 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
21. RBBP8 ENSGALG00000014982 3255 1.493 - - 0.782 0.711 - - - - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
22. PRPF40A ENSGALG00000012526 7724 1.478 - - 0.755 - - - 0.723 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
23. NAA16 ENSGALG00000032808 3366 1.477 - - - - - - 0.715 0.762 - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
24. FTD FTD 3041 1.475 - - 0.770 - - - - 0.705 - -
25. SEC22B ENSGALG00000039704 16080 1.471 - - 0.759 - - - 0.712 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
26. PKN3 532 0.967 - - - - - - 0.967 - - - protein kinase N3, transcript variant X2
27. ENSGALG00000013233 ENSGALG00000013233 3265 0.962 - - - - - - 0.962 - - -
28. GAS6 ENSGALG00000016820 481 0.953 - - - - - - 0.953 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
29. FAM57A ENSGALG00000004820 1492 0.953 - - - - - - 0.953 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
30. NSRP1 ENSGALG00000004186 1683 0.952 - - - - - - 0.952 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
31. NIN ENSGALG00000012361 2284 0.951 - - - - - - 0.951 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
32. TM2D3 ENSGALG00000026271 2566 0.951 - - - - - - 0.951 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
33. ENSGALG00000002852 ENSGALG00000002852 2687 0.951 - - - - - - 0.951 - - -
34. ITSN1 ENSGALG00000036677 5727 0.951 - - - - - - 0.951 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
35. UBE3B ENSGALG00000013851 1672 0.95 - - - - - - 0.950 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
36. SPAG9 ENSGALG00000034001 2314 0.948 - - - - - - 0.948 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
37. SGSM3 ENSGALG00000012033 1839 0.947 - - - - - - 0.947 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
38. SDK2 ENSGALG00000031895 2682 0.946 - - - - - - 0.946 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
39. DNAJC16 ENSGALG00000032832 750 0.945 - - - - - - 0.945 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
40. FAM183A 242 0.944 - - - - - - 0.944 - - - family with sequence similarity 183 member A, transcript variant 2
41. SCAF4 ENSGALG00000033965 2027 0.943 - - - - - - 0.943 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
42. PGAP2 ENSGALG00000027762 2583 0.943 - - - - - - 0.943 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
43. ENTPD8L ENSGALG00000008936 731 0.941 - - - - - - 0.941 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
44. LFNG ENSGALG00000038515 5178 0.941 - - - - - - 0.941 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
45. NUP205 ENSGALG00000011662 4157 0.941 - - - - - - 0.941 - - - nucleoporin 205
46. CEP290 ENSGALG00000011177 1559 0.94 - - - - - - 0.940 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
47. SNORA31 SNORA31 183 0.94 - - - - - - 0.940 - - -
48. WIPI1 ENSGALG00000004215 3359 0.939 - - - - - - 0.939 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
49. ENSGALG00000003619 ENSGALG00000003619 58 0.938 - - - - - - 0.938 - - -
50. RAB1A ENSGALG00000031582 6929 0.938 - - - - - - 0.938 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
51. TCTE1 ENSGALG00000010165 65 0.938 - - - - - - 0.938 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
52. WDSUB1 ENSGALG00000012574 2038 0.937 - - - - - - 0.937 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
53. ENSGALG00000016099 ENSGALG00000016099 138 0.937 - - - - - - 0.937 - - -
54. HESX1 ENSGALG00000005506 203 0.937 - - - - - - 0.937 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
55. MXRA5 ENSGALG00000016635 352 0.937 - - - - - - 0.937 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
56. PIK3R3 ENSGALG00000010335 374 0.937 - - - - - - 0.937 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
57. ENSGALG00000026925 ENSGALG00000026925 119 0.936 - - - - - - 0.936 - - -
58. SCUBE1 ENSGALG00000014178 91 0.936 - - - - - - 0.936 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
59. C14orf80 C14orf80 1921 0.936 - - - - - - 0.936 - - -
60. HEMK1 ENSGALG00000002253 40 0.935 - - - - - - 0.935 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
61. MESDC1 1013 0.935 - - - - - - 0.935 - - - mesoderm development candidate 1
62. GRB14 ENSGALG00000020703 42 0.935 - - - - - - 0.935 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
63. MBTPS1 ENSGALG00000003293 4843 0.935 - - - - - - 0.935 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
64. METTL24 ENSGALG00000041120 60 0.935 - - - - - - 0.935 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
65. PTN ENSGALG00000040493 864 0.934 - - - - - - 0.934 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
66. ENSGALG00000028164 ENSGALG00000028164 3325 0.933 - - - - - - 0.933 - - -
67. UBR2 ENSGALG00000009906 7717 0.932 - - 0.932 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
68. UPK3BL ENSGALG00000001885 1650 0.931 - - - - - - 0.931 - - - uroplakin 3B-like
69. N4BP2L2 857 0.93 - - 0.930 - - - - - - - NEDD4 binding protein 2 like 2, transcript variant X7
70. USP54 ENSGALG00000005232 2749 0.93 - - - - - - 0.930 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
71. NCAPG2 ENSGALG00000006525 2319 0.93 - - - - - - 0.930 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
72. FAM193A ENSGALG00000015667 3075 0.928 - - - - - - 0.928 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
73. COPS8 ENSGALG00000033385 10166 0.927 - - - - - - 0.927 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
74. ERMP1 ENSGALG00000000438 1136 0.927 - - - - - - 0.927 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
75. TM9SF4 ENSGALG00000006568 567 0.926 - - - - - - 0.926 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
76. MBNL2 ENSGALG00000016890 3162 0.926 - - - - - - 0.926 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
77. GOSR1 ENSGALG00000004326 1556 0.926 - - 0.926 - - - - - - - golgi SNAP receptor complex member 1 [Source:NCBI gene;Acc:417591]
78. CCNL1 ENSGALG00000009699 1033 0.926 - - - - - - 0.926 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
79. SRP72 ENSGALG00000011403 13666 0.924 - - - - - - 0.924 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
80. PLCE1 ENSGALG00000039528 151 0.924 - - - - - - 0.924 - - - phospholipase C epsilon 1
81. TPR ENSGALG00000005105 2924 0.923 - - - - - - 0.923 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
82. RYR2 ENSGALG00000010812 95 0.923 - - - 0.923 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
83. ADPRHL2 ENSGALG00000002304 2674 0.923 - - 0.923 - - - - - - - ADP-ribosylhydrolase like 2 [Source:NCBI gene;Acc:419626]
84. FTSJ2 FTSJ2 2951 0.922 - - - - - - 0.922 - - -
85. CCNE2 ENSGALG00000040794 1229 0.921 - - - - - - 0.921 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
86. MST1 ENSGALG00000002722 994 0.921 - - - - - - 0.921 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
87. SNRB SNRB 4477 0.92 - - 0.920 - - - - - - -
88. MGLL ENSGALG00000032736 612 0.92 - - - - - - 0.920 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
89. XPO7 ENSGALG00000001838 1875 0.92 - - - - - - 0.920 - - - exportin 7 [Source:NCBI gene;Acc:426925]
90. RNF20 ENSGALG00000015548 7199 0.919 - - - - - - 0.919 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
91. ZFYVE19 ENSGALG00000008460 2750 0.918 - - - - - - 0.918 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
92. ATP6V0A2 ENSGALG00000003194 4824 0.918 - - 0.918 - - - - - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
93. ARRDC4 ENSGALG00000007012 1039 0.915 - - 0.915 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
94. AIM1 51 0.915 - - - 0.915 - - - - - - absent in melanoma 1, transcript variant X2
95. REXO2 ENSGALG00000035980 16319 0.915 - - 0.915 - - - - - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
96. TMEM135 2283 0.915 - - - - - - 0.915 - - - transmembrane protein 135, transcript variant X4
97. DNAJC12 ENSGALG00000002769 1418 0.915 - - - - - - 0.915 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
98. TRIT1 ENSGALG00000003851 1518 0.915 - - 0.915 - - - - - - - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
99. SEC11C ENSGALG00000031663 4266 0.914 - - 0.914 - - - - - - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
100. NT5C2 ENSGALG00000008179 1760 0.914 - - - - - - 0.914 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]

There are 728 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA