Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPEN

Gene Name Gene ID Reads Annotation
SPEN ENSDARG00000074245, ENSDARG00000116696 1412 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]










Genes with expression patterns similar to SPEN

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
2. itpkcb ENSDARG00000067741 2370 2.768 - - - - 0.815 - 0.974 - 0.979 inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
3. ppig ENSDARG00000044431 3427 2.51 - - - 0.741 0.786 - - - 0.983 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
4. nup188 ENSDARG00000030022 2398 2.492 - - - 0.753 0.755 - - - 0.984 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
5. mybbp1a ENSDARG00000078214 2458 2.325 - 0.715 - 0.722 0.888 - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
6. arid2 ENSDARG00000007413 4413 2.223 - 0.749 - - 0.772 0.702 - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
7. psmd1 ENSDARG00000003189 4373 2.167 - 0.717 - - - 0.742 - 0.708 - proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
8. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 1.94 - - - - - - 0.967 - 0.973 dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
9. atf6 ENSDARG00000012656 3873 1.931 - - - - - - 0.944 - 0.987 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
10. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.929 - - - - - - 0.963 - 0.966 ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
11. scaf11 ENSDARG00000045885 3531 1.928 - - - - - - 0.949 - 0.979 SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
12. dhdds ENSDARG00000039851 1135 1.922 - - - - 0.925 - 0.997 - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
13. ef1 1343 1.915 - - - - - - 0.929 - 0.986 E74-like factor 1 (ets domain transcription factor), transcript variant X4
14. mrps7 ENSDARG00000101622 889 1.908 - - - - 0.912 - 0.996 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
15. papolg ENSDARG00000012141 1445 1.902 - - - - 0.907 - 0.995 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
16. tmem203 ENSDARG00000104996 1182 1.891 - - - - 0.897 - 0.994 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
17. si:ch211-22i13.2 ENSDARG00000043485 4719 1.88 - - - - - - 0.911 - 0.969 si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
18. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.872 - - - - 0.895 - - - 0.977 SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
19. PTS ENSDARG00000045269 2185 1.869 - 0.877 - - - - 0.992 - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
20. pi4k2b ENSDARG00000013881 1337 1.859 - - - - 0.881 - - - 0.978 phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
21. wasf3 wasf3 3287 1.854 - - - - 0.900 - - - 0.954
22. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.851 - - - - - - 0.973 - 0.878 A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
23. RNF111 ENSDARG00000078802 1357 1.85 - - - - - 0.872 0.978 - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
24. slc45a2 ENSDARG00000002593, ENSDARG00000111365 776 1.849 - - - - 0.880 - 0.969 - - solute carrier family 45, member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-97]
25. decr1 ENSDARG00000003869 1344 1.847 - - - - 0.886 - 0.961 - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
26. wipi1 ENSDARG00000040657 2732 1.836 - - - - - - 0.973 - 0.863 WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
27. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 1.835 - - - - - - 0.995 0.840 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
28. CACHD1 ENSDARG00000061590 1287 1.832 - - - - - - 0.980 0.852 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
29. necap2 ENSDARG00000046002 4372 1.822 - - - - 0.870 - - - 0.952 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
30. kpna4 ENSDARG00000023190 2505 1.82 - - - - 0.843 - - - 0.977 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
31. tpd52l2b ENSDARG00000013655 9460 1.815 - - - - - - 0.921 - 0.894 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
32. srrm2 ENSDARG00000037965 1967 1.807 - - - 0.824 - - 0.983 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
33. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.801 - - - 0.811 - - - - 0.990 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
34. fermt1 ENSDARG00000052652 2394 1.796 - - - - 0.921 - 0.875 - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
35. supt4h1 ENSDARG00000113969 1024 1.786 - - - 0.819 - - 0.967 - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
36. cdk16_1 ENSDARG00000032072 2031 1.781 - - - - 0.811 - 0.970 - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
37. fam213aa 1986 1.781 - - - - 0.899 - 0.882 - - family with sequence similarity 213, member Aa
38. plekhh1 ENSDARG00000053835 2123 1.78 - 0.784 - - - - 0.996 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
39. zgc:101640 733 1.779 - - - - - - - 0.843 0.936 zgc:101640, transcript variant X2
40. prim1 ENSDARG00000040163 909 1.778 - - - 0.785 - - 0.993 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
41. ERRFI1 ERRFI1 664 1.778 - 0.784 - - - - 0.994 - -
42. CABZ01078889.1 CABZ01078889.1 911 1.777 - - - - - 0.783 0.994 - -
43. mrpl15 ENSDARG00000101306 2796 1.774 - - - - - - - 0.806 0.968 mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
44. plxna1 plxna1 1357 1.772 - 0.852 - - 0.920 - - - -
45. fbxo30a ENSDARG00000058561 867 1.77 - - - - - - 0.988 0.782 - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
46. ankrd50l ENSDARG00000007077 1115 1.767 - - - - - - 0.973 0.794 - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
47. hsbp1b ENSDARG00000041921 6170 1.763 - 0.823 - - - - - - 0.940 heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
48. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.755 - - - - 0.915 - - 0.840 - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
49. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 1.754 - - - - 0.915 - - 0.839 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
50. phf21ab ENSDARG00000021378 1706 1.75 - - - - - - 0.986 0.764 - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
51. mpdu1b ENSDARG00000040265 1968 1.75 - - - - 0.757 - 0.993 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
52. herpud2 ENSDARG00000021033 1800 1.75 - - - - 0.872 0.878 - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
53. SEMA4B SEMA4B 1259 1.748 - - - - - - 0.947 0.801 -
54. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.746 - - - - - - 0.946 0.800 - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
55. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 1.743 - - - - - - 0.914 0.829 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
56. utp23 ENSDARG00000105012 1346 1.742 - - - - 0.921 - - 0.821 - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
57. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.738 - - - - 0.812 - - - 0.926 Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
58. ttc1 ENSDARG00000044567 1141 1.737 - - - 0.742 - - 0.995 - - tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
59. ndst2a ENSDARG00000086269 754 1.736 - - - - - 0.748 - - 0.988 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
60. ik ENSDARG00000004161 3132 1.734 - - - 0.756 - - 0.978 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
61. mrps30 ENSDARG00000104111 2900 1.733 - - - - 0.798 - 0.935 - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
62. aldh5a1 ENSDARG00000076544, ENSDARG00000113300 1021 1.731 - - - 0.796 - - 0.935 - - aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]
63. snrnp70 ENSDARG00000077126 5921 1.729 - 0.754 - - - - 0.975 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
64. btf3l4_1 ENSDARG00000089681 1089 1.727 - - - - - - 0.985 0.742 - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
65. eftud2 ENSDARG00000012261 3081 1.726 - - - - 0.749 - 0.977 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
66. zgc:63587 ENSDARG00000017140 8399 1.725 - - - - - - 0.907 - 0.818 zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
67. fzr1 fzr1 2984 1.725 - 0.754 - - - - 0.971 - -
68. sp1 ENSDARG00000088347 1697 1.723 - - - - 0.770 - 0.953 - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
69. NTAN1 ENSDARG00000105182 844 1.721 - - - - - 0.735 0.986 - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
70. mark2b ENSDARG00000032458 821 1.719 - - - - 0.907 - - 0.812 - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
71. mycla ENSDARG00000006003 1866 1.719 - - - - 0.923 - - 0.796 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
72. sra1 ENSDARG00000053619 2799 1.718 - - - - 0.747 - - - 0.971 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
73. maf1 ENSDARG00000013122 3365 1.718 - - - 0.752 - - - - 0.966 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
74. mmp16a 1128 1.718 - - - 0.773 - - 0.945 - - matrix metallopeptidase 16a (membrane-inserted)
75. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.717 - 0.724 - - - - 0.993 - -
76. chst11 ENSDARG00000034375 2701 1.716 - - - - - - 0.968 0.748 - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
77. slc2a8 ENSDARG00000104278 764 1.715 - - - - 0.882 - - 0.833 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
78. ncl1 2835 1.715 - 0.732 - - - - - - 0.983 nicalin, transcript variant X3
79. atp6v1f ENSDARG00000045543 3445 1.714 - - - - - 0.732 - - 0.982 ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
80. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.709 - 0.717 - - - - 0.992 - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
81. cenpo ENSDARG00000075619, ENSDARG00000111160 378 1.701 - 0.781 - - 0.920 - - - - centromere protein O [Source:ZFIN;Acc:ZDB-GENE-070928-16]
82. cadm1a ENSDARG00000031075 2484 1.699 - - - 0.744 - - 0.955 - - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
83. cul1b ENSDARG00000007691 719 1.696 - 0.702 - - - - 0.994 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
84. sult6b1 ENSDARG00000086826 2070 1.695 - - - - 0.849 - - 0.846 - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
85. ncapg2 ENSDARG00000060023 993 1.695 - - - 0.716 - - 0.979 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
86. timm23 timm23 2712 1.692 - - - 0.705 - - 0.987 - -
87. eng1a eng1a 484 1.692 - - - - 0.875 - - 0.817 -
88. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.69 - - - - - 0.752 0.938 - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
89. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.688 - - - - 0.778 - 0.910 - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
90. laptm4b ENSDARG00000035870, ENSDARG00000110893 960 1.687 - - - 0.730 - - 0.957 - - lysosomal protein transmembrane 4 beta [Source:ZFIN;Acc:ZDB-GENE-030616-616]
91. cbx4 ENSDARG00000099441 372 1.683 - - - 0.775 0.908 - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
92. rcor2 ENSDARG00000008278 1678 1.683 - - 0.708 - - - - - 0.975 REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
93. tm2d3 ENSDARG00000076618 2310 1.68 - - - - 0.898 - - - 0.782 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
94. ywhah ENSDARG00000005560 11079 1.655 - - - - - - 0.736 - 0.919 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
95. nup210 ENSDARG00000063333 995 1.65 - 0.767 - - 0.883 - - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
96. gstal gstal 1865 1.65 - - - - - 0.719 0.931 - -
97. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.645 - - - - - - 0.835 0.810 - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
98. CU915738.1 CU915738.1 3723 1.645 - - - - 0.822 - - - 0.823
99. arpc4l ENSDARG00000058225 10107 1.643 - - - - - - 0.803 - 0.840 actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
100. dctd ENSDARG00000036990 2168 1.64 - - - - 0.834 - - 0.806 - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]

There are 1784 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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