Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPEN

Gene Name Gene ID Reads Annotation
SPEN ENSGALG00000036932 9688 spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]











Genes with expression patterns similar to SPEN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPEN ENSGALG00000036932 9688 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
2. MYO9A ENSGALG00000033618 4505 2.52 - - - - 0.956 - 0.702 0.862 - - myosin IXA, transcript variant X10
3. NEK6 ENSGALG00000001118 20333 1.838 - - - - 0.955 - 0.883 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
4. GATC ENSGALG00000007195 8610 1.782 - - - - 0.943 - - 0.839 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
5. CEP78 ENSGALG00000015179 5227 1.757 - - - - 0.945 - 0.812 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
6. GABARAPL2 ENSGALG00000003208 9195 1.741 - - - - 0.933 - 0.808 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
7. CENPP ENSGALG00000004687 6707 1.739 - - - - 0.935 - 0.804 - - - centromere protein P [Source:NCBI gene;Acc:415952]
8. CDKN1B ENSGALG00000022980 4606 1.731 - - - - 0.962 - 0.769 - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
9. TTC3 ENSGALG00000016050 4115 1.731 - - - - - - 0.834 0.897 - - tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
10. TAF3 ENSGALG00000006731 15569 1.73 - - - - 0.948 - 0.782 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
11. DLD ENSGALG00000007931 11011 1.716 - - - - 0.944 - 0.772 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
12. ZNHIT3 ENSGALG00000026031 8652 1.711 - - - - - - 0.747 0.964 - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
13. CHMP5 ENSGALG00000013160 13347 1.702 - - - - 0.916 - 0.786 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
14. LGALS1 ENSGALG00000012420 13993 1.696 - - - - 0.944 - 0.752 - - - galectin 1 [Source:NCBI gene;Acc:396491]
15. GSPT1 15580 1.691 - - - - 0.945 - 0.746 - - - G1 to S phase transition 1, transcript variant X1
16. MRPL21 ENSGALG00000004362 20796 1.688 - - - - 0.905 - - 0.783 - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
17. EIF3B ENSGALG00000040999 49971 1.679 - - - - 0.881 - 0.798 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
18. RAD23B ENSGALG00000015540 10828 1.678 - - - - 0.928 - 0.750 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
19. PRCC ENSGALG00000040696 9346 1.675 - - - - 0.956 - 0.719 - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
20. LOC426385 ENSGALG00000026301 2703 1.667 - - - - 0.963 - 0.704 - - - serine/threonine kinase 35-like, transcript variant X2
21. DNAJC9 ENSGALG00000002701 19249 1.665 - - - - 0.943 - - 0.722 - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
22. RAB11A ENSGALG00000007615 9154 1.665 - - - - - - 0.853 0.812 - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
23. TTC37 ENSGALG00000014670 5715 1.651 - - - - - - 0.792 0.859 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
24. MIEN1 ENSGALG00000026328 3396 1.649 - - - - - - 0.793 0.856 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
25. YBX1 ENSGALG00000004848 20992 1.63 0.703 - - - 0.927 - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
26. DIMT1 ENSGALG00000020569 5150 1.613 - - - - - - 0.751 0.862 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
27. LSM5 ENSGALG00000041625 22307 1.612 - - - - 0.832 - 0.780 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
28. C17H9ORF16 C17H9ORF16 7908 1.601 - - - - - - 0.783 0.818 - -
29. PIK3IP1 ENSGALG00000006942 8388 1.6 - - - - - - 0.758 - - 0.842 phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
30. NEO1 ENSGALG00000001774 10165 1.596 - - - - - - 0.730 0.866 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
31. HP1BP3 ENSGALG00000010079 33723 1.571 - - - - 0.868 - - - - 0.703 heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
32. SIRT6 ENSGALG00000001245 3716 1.567 - - - - - - 0.703 0.864 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
33. EHD3 ENSGALG00000009086 14407 1.567 - - - - - - 0.816 - - 0.751 EH domain containing 3 [Source:NCBI gene;Acc:421306]
34. CSE1L ENSGALG00000004707 20653 1.566 - - - - - - 0.771 0.795 - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
35. CTCF 10811 1.562 - - - - - - 0.833 - - 0.729 CCCTC-binding factor, transcript variant X2
36. CTSA ENSGALG00000006876 5380 1.534 - - - - - - 0.740 - - 0.794 cathepsin A [Source:NCBI gene;Acc:428163]
37. ARPC1A ENSGALG00000004693 11583 1.525 - - - - - - 0.735 0.790 - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
38. MRPL37 ENSGALG00000010761 10596 1.522 - - - - - - 0.752 0.770 - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
39. TMEM167A ENSGALG00000027332 13862 1.512 - - - - - - 0.810 0.702 - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
40. SREK1IP1 ENSGALG00000026028 5756 1.495 - - - - - - 0.701 - - 0.794 SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
41. TET1 ENSGALG00000031604 13002 1.494 - - - - - - 0.776 - - 0.718 tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
42. FARP1 ENSGALG00000016886 13132 1.485 - - - - - - 0.731 - - 0.754 FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
43. YIPF3 ENSGALG00000041037 6126 1.483 - - - - - - 0.725 0.758 - - Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
44. ACBD3 ENSGALG00000009246 8405 1.45 - - - - - - 0.717 0.733 - - acyl-CoA binding domain containing 3 [Source:NCBI gene;Acc:421317]
45. ZC3H18 2569 1.444 - - - - - - 0.722 - - 0.722 zinc finger CCCH-type containing 18, transcript variant X3
46. BSG ENSGALG00000001328 37947 1.433 - - - - - - 0.724 0.709 - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
47. CDK9 ENSGALG00000035576 3659 1.431 - - - - - - 0.721 0.710 - - cyclin dependent kinase 9 [Source:NCBI gene;Acc:417226]
48. KIF3A ENSGALG00000006860 6209 0.975 - - - - - - - 0.975 - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
49. RHOT1 ENSGALG00000003397 5149 0.973 - - - - 0.973 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
50. RBM15B 5416 0.972 - - - - - - - 0.972 - - RNA binding motif protein 15B
51. MEF2BNB MEF2BNB 5578 0.97 - - - - 0.970 - - - - -
52. ASAP2 ENSGALG00000016419 1393 0.968 - - - - 0.968 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
53. SNX14 ENSGALG00000015831 2554 0.968 - - - - 0.968 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
54. RBM34 ENSGALG00000029915 5618 0.968 - - - - 0.968 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
55. UTP6 ENSGALG00000003260 4909 0.967 - - - - 0.967 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
56. PITHD1 ENSGALG00000003986 11470 0.967 - - - - 0.967 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
57. LZIC ENSGALG00000002616 9052 0.967 - - - - 0.967 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
58. PSMD3 ENSGALG00000033162 25615 0.967 - - - - 0.967 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
59. YARS ENSGALG00000003563 11093 0.967 - - - - 0.967 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
60. BRF1 ENSGALG00000011705 3406 0.967 - - - - 0.967 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
61. ENSGALG00000006569 ENSGALG00000006569 2169 0.966 - - - - 0.966 - - - - -
62. DGKZ ENSGALG00000008380 5389 0.965 - - - - 0.965 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
63. PHTF1 ENSGALG00000001845 3276 0.965 - - - - 0.965 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
64. MRPL16 ENSGALG00000029419 8033 0.965 - - - - 0.965 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
65. PTK2B ENSGALG00000016564 406 0.965 - - - - 0.965 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
66. MED21 ENSGALG00000027435 5766 0.965 - - - - 0.965 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
67. TIMMDC1 ENSGALG00000024480 9337 0.965 - - - - 0.965 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
68. WDR92 ENSGALG00000008760 3934 0.965 - - - - 0.965 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
69. SDCBP ENSGALG00000015436 1228 0.965 - - - - 0.965 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
70. SAP30 ENSGALG00000036252 2032 0.965 - - - - 0.965 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
71. MYBL2 ENSGALG00000003503 15875 0.965 - - - - 0.965 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
72. NDUFV1 ENSGALG00000042809 6222 0.964 - - - - 0.964 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
73. ANKRD9 ENSGALG00000011376 525 0.964 - - - - 0.964 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
74. PREP2 PREP2 238 0.964 - - - - 0.964 - - - - -
75. SYNE1 ENSGALG00000013505 2324 0.964 - - - - 0.964 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
76. RAMP3 ENSGALG00000037246 1187 0.964 - - - - 0.964 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
77. SMG7 ENSGALG00000004667 707 0.964 - - - - 0.964 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
78. PRDM4 ENSGALG00000012619 876 0.964 - - - - 0.964 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
79. HSF2 ENSGALG00000038420 5259 0.964 - - - - 0.964 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
80. BAHD1 ENSGALG00000033675 1779 0.963 - - - - 0.963 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
81. STARD3NL ENSGALG00000033038 4851 0.963 - - - - 0.963 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
82. RBM6 ENSGALG00000035578 1690 0.963 - - - - 0.963 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
83. RAD54B ENSGALG00000043597 1699 0.963 - - - - 0.963 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
84. MED8 ENSGALG00000009993 3095 0.963 - - - - 0.963 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
85. SFXN5 ENSGALG00000016094 2678 0.963 - - - - 0.963 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
86. MARC1 ENSGALG00000009453 5675 0.962 - - - - 0.962 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
87. HDAC8 ENSGALG00000004825 12066 0.962 - - - - 0.962 - - - - - histone deacetylase 8, transcript variant X2
88. GTF2H1 ENSGALG00000042340 1553 0.962 - - - - 0.962 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
89. PBRM1 ENSGALG00000037455 6450 0.962 - - - - 0.962 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
90. COQ5 ENSGALG00000007185 5614 0.962 - - - - 0.962 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
91. ETS1 ENSGALG00000001143 7284 0.961 - - - - 0.961 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
92. TMF1 ENSGALG00000013408 3344 0.961 - - - - 0.961 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
93. ZC3H6 ENSGALG00000008269 10353 0.961 - - - - 0.961 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
94. SLMO2 SLMO2 9207 0.96 - - - - 0.960 - - - - -
95. ACAT2 ENSGALG00000011659 12825 0.96 - - - - 0.960 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
96. DLL1 ENSGALG00000011182 1613 0.96 - - - - 0.960 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
97. LMAN2 ENSGALG00000033232 11740 0.959 - - - - 0.959 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
98. C9orf85 ENSGALG00000026001 4110 0.959 - - - - 0.959 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
99. Mar-05 Mar-05 6330 0.959 - - - - 0.959 - - - - -
100. IARS2 ENSGALG00000009566 4599 0.959 - - - - 0.959 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]

There are 896 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA